Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019235
CDS Infomation

pacid=37466295 polypeptide=PGSC0003DMP400013180 locus=PGSC0003DMG400007435 ID=PGSC0003DMT400019235.v4.03 annot-version=v4.03
Sequence

ATGGGTCATCAGAAAGAGGATTTAATCAATGAGCTGACGGAGTTGATCGATGGGGTTTCT
GGTTTGCCGGAGTGCCGGTCGGTGTCTAAGAGGATGTACAGTAATTTGGTGAGAAGGGTG
AAGCTTTTGAGCCCTTTAGTTGAGGATTTGAAAGATAGTGATGGTGTTGAGGTTGGTGAT
GATGTTGTTCATGGACTTGAGTTGTTGAGAATTGCTCTTATTTCAGGTTTGGAGCTTCTC
AAATCTGTAAATGAAGGCAGTAAGATTCTTCAGGCTTTACAGATCGAGAACATATCATCA
AGGTTCCTAAATGTGACAGAGCAAATTGAAGATGCACTAAGCGACATTCCTTACAATAAG
CTTGATTTATCTGAGGAAGTTCAAGAACAAATTGAACTTGTGCATGCTCAATTCAAAAGA
GCCAAAGGAAAGATGGAGTCACCTGATGAGCAACTTGAAAAGGATTTAGCTATGGCACAA
AGGGAACAATATCCTGACCCCATGATTTTCAAACGGCTGTCTGAGAAACTGCATCTCAGG
ACCATAAATGATCTAAAGAAGGAGTCGCTTGCCATCCATGACATGGTCATTTCTAGTGGT
GGAGATCCCGAAGAGTGTTTTGAAACAATAGCATACCTCCTAAGAAAGCTAAAGGACTGT
GCGATGACAGAGAATCCTGAACTGGATGCCCTTGAGGGTGACAAGAGTTTGATTAAGCAC
AGATCTCCCGTTATTCCGGATGACTTCCGCTGTCCAATATCACTTGAGTTGATGAAAGAT
CCTGTTATTGTATCTACCGGACAGACCTATGAAAGGTCGTGCATCCAAAAATGGCTGGAT
GCAGGACACAAGACCTGCCCTAAGACTCAGCAGACACTGTTGCATACTGCATTGACTCCA
AACTATGTTTTGAAAAGCCTGATTGCCTTGTGGTGTGAGAATAATGGTGTTGAGCTGCCT
AAAAAACAAGGAACTTGTAGGAACAAAAGATCTGGAGCTGGTGGTTCGGACTGTGATCGT
GCTGCTATTGATGCGTTATTACAAAAACTTGCTAATGGTAATCCGGAGCAGCAAAGAGCA
GCTGCTGGTGAGCTCCGTTTGCTAGCAAAAAGAAATGCTGATAACAGAGTCTGCATTGCT
GGAGCCGGGGCAATTCCTCTACTTGTTGAACTACTATCATCATCAGATTCTCGTACTCAG
GAGCATGCTGTCACCGCACTTCTTAACCTATCCATAAATGAAGGTAACAAGGGAACTATT
GTAAATGCTGGTGCTATACCTGATATAGTAGATGTACTAAGAAATGGAAGCATGGAAGCA
AGGGAAAATGCAGCTGCTACCCTTTTCAGTTTATCAGTAGTTGATGAAAACAAAGTGGCA
ATAGGAGCAGCCGGTGCTATCCCAGCGCTTATTGATTTGCTCTGTCATGGAACCCCAAGG
GGAAAAAAGGACGCTGCCACTGCTATATTCAACCTCTCAATCTATCAAGGAAACAAAGTG
AGGGCAGTACGGGCTGGAATTGTACCACCACTAGTGAGATTACTCAAGGATCCCGGGGGT
GGAATGATGGATGAAGCACTTGCTATATTGGCAATACTAGCAAGTCATCAGGAGGGTAAG
GCAGCTATTGCTCAATCTGAGCCACTCCCCGTCTTAGTTGAGGTAATTAGGACAGGTTCT
CCTCGTAACCGAGAGAATGCTGCAGCTATTTTGTGGTCTCTATGTACAGGTGATGTACAG
AGCTTAAAGATCGTTAGGGAGCTTGGAGTAGAAGAGGTACTGAAGGAACTATCGGAGAAT
GGTACAGATAGAGCTAAAAGAAAAGCCGGAAGTGTTTTGGAACTTCTTCAACGAGTCGAT
CCAGTTGAATCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400013180
PEP Infomation

pacid=37466295 transcript=PGSC0003DMT400019235 locus=PGSC0003DMG400007435 ID=PGSC0003DMT400019235.v4.03 annot-version=v4.03
Sequence

MGHQKEDLINELTELIDGVSGLPECRSVSKRMYSNLVRRVKLLSPLVEDLKDSDGVEVGD
DVVHGLELLRIALISGLELLKSVNEGSKILQALQIENISSRFLNVTEQIEDALSDIPYNK
LDLSEEVQEQIELVHAQFKRAKGKMESPDEQLEKDLAMAQREQYPDPMIFKRLSEKLHLR
TINDLKKESLAIHDMVISSGGDPEECFETIAYLLRKLKDCAMTENPELDALEGDKSLIKH
RSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTP
NYVLKSLIALWCENNGVELPKKQGTCRNKRSGAGGSDCDRAAIDALLQKLANGNPEQQRA
AAGELRLLAKRNADNRVCIAGAGAIPLLVELLSSSDSRTQEHAVTALLNLSINEGNKGTI
VNAGAIPDIVDVLRNGSMEARENAAATLFSLSVVDENKVAIGAAGAIPALIDLLCHGTPR
GKKDAATAIFNLSIYQGNKVRAVRAGIVPPLVRLLKDPGGGMMDEALAILAILASHQEGK
AAIAQSEPLPVLVEVIRTGSPRNRENAAAILWSLCTGDVQSLKIVRELGVEEVLKELSEN
GTDRAKRKAGSVLELLQRVDPVES*

Transcript Sequence

Transcript ID

PGSC0003DMT400019235
Transcript Infomation

pacid=37466295 locus=PGSC0003DMG400007435 ID=PGSC0003DMT400019235.v4.03 annot-version=v4.03
Sequence

ATGGGTCATCAGAAAGAGGATTTAATCAATGAGCTGACGGAGTTGATCGATGGGGTTTCT
GGTTTGCCGGAGTGCCGGTCGGTGTCTAAGAGGATGTACAGTAATTTGGTGAGAAGGGTG
AAGCTTTTGAGCCCTTTAGTTGAGGATTTGAAAGATAGTGATGGTGTTGAGGTTGGTGAT
GATGTTGTTCATGGACTTGAGTTGTTGAGAATTGCTCTTATTTCAGGTTTGGAGCTTCTC
AAATCTGTAAATGAAGGCAGTAAGATTCTTCAGGCTTTACAGATCGAGAACATATCATCA
AGGTTCCTAAATGTGACAGAGCAAATTGAAGATGCACTAAGCGACATTCCTTACAATAAG
CTTGATTTATCTGAGGAAGTTCAAGAACAAATTGAACTTGTGCATGCTCAATTCAAAAGA
GCCAAAGGAAAGATGGAGTCACCTGATGAGCAACTTGAAAAGGATTTAGCTATGGCACAA
AGGGAACAATATCCTGACCCCATGATTTTCAAACGGCTGTCTGAGAAACTGCATCTCAGG
ACCATAAATGATCTAAAGAAGGAGTCGCTTGCCATCCATGACATGGTCATTTCTAGTGGT
GGAGATCCCGAAGAGTGTTTTGAAACAATAGCATACCTCCTAAGAAAGCTAAAGGACTGT
GCGATGACAGAGAATCCTGAACTGGATGCCCTTGAGGGTGACAAGAGTTTGATTAAGCAC
AGATCTCCCGTTATTCCGGATGACTTCCGCTGTCCAATATCACTTGAGTTGATGAAAGAT
CCTGTTATTGTATCTACCGGACAGACCTATGAAAGGTCGTGCATCCAAAAATGGCTGGAT
GCAGGACACAAGACCTGCCCTAAGACTCAGCAGACACTGTTGCATACTGCATTGACTCCA
AACTATGTTTTGAAAAGCCTGATTGCCTTGTGGTGTGAGAATAATGGTGTTGAGCTGCCT
AAAAAACAAGGAACTTGTAGGAACAAAAGATCTGGAGCTGGTGGTTCGGACTGTGATCGT
GCTGCTATTGATGCGTTATTACAAAAACTTGCTAATGGTAATCCGGAGCAGCAAAGAGCA
GCTGCTGGTGAGCTCCGTTTGCTAGCAAAAAGAAATGCTGATAACAGAGTCTGCATTGCT
GGAGCCGGGGCAATTCCTCTACTTGTTGAACTACTATCATCATCAGATTCTCGTACTCAG
GAGCATGCTGTCACCGCACTTCTTAACCTATCCATAAATGAAGGTAACAAGGGAACTATT
GTAAATGCTGGTGCTATACCTGATATAGTAGATGTACTAAGAAATGGAAGCATGGAAGCA
AGGGAAAATGCAGCTGCTACCCTTTTCAGTTTATCAGTAGTTGATGAAAACAAAGTGGCA
ATAGGAGCAGCCGGTGCTATCCCAGCGCTTATTGATTTGCTCTGTCATGGAACCCCAAGG
GGAAAAAAGGACGCTGCCACTGCTATATTCAACCTCTCAATCTATCAAGGAAACAAAGTG
AGGGCAGTACGGGCTGGAATTGTACCACCACTAGTGAGATTACTCAAGGATCCCGGGGGT
GGAATGATGGATGAAGCACTTGCTATATTGGCAATACTAGCAAGTCATCAGGAGGGTAAG
GCAGCTATTGCTCAATCTGAGCCACTCCCCGTCTTAGTTGAGGTAATTAGGACAGGTTCT
CCTCGTAACCGAGAGAATGCTGCAGCTATTTTGTGGTCTCTATGTACAGGTGATGTACAG
AGCTTAAAGATCGTTAGGGAGCTTGGAGTAGAAGAGGTACTGAAGGAACTATCGGAGAAT
GGTACAGATAGAGCTAAAAGAAAAGCCGGAAGTGTTTTGGAACTTCTTCAACGAGTCGAT
CCAGTTGAATCATGA