Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019171
CDS Infomation

pacid=37464973 polypeptide=PGSC0003DMP400013139 locus=PGSC0003DMG400007418 ID=PGSC0003DMT400019171.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAGCAGATCAGAATGAGAACGGAAATCCGGCGGCGGCGGTGGAGGAAACCGAA
ACGGTTATTGGACCGGGTCCAGCTCCTCGTGCTCGTGCTAAACGTCCTCTTCAATTTGAG
CAAGCTTATCTCGATTCACTTCCTTCAGCTAACTTGTATGAAAAAAGTTACATGCACCGA
GACGTGGTTACTCATGTTGCTGTTTCAGCAGCAGATTTTTTCATTAGTGGGAGTACTGAT
GGTCACCTGAAATTTTGGAAGAAAAAGCCTATTGGTATCGAGTTTGCAAAACATTTTAGA
TCTCATCTTGGACCAATTGAAGGCCTTGCAGTTAGCATTGATGGTATGCTTTGCTGTACA
ATCTCAAGTGATAAGTCTCTGAAAATATATGACGTAGTGAATTATGACATGATGTCCATG
ATTCGTCTTCCATTCATACCTGGATGTGTTGAATGGGTATATAAACAAGGGGCTGTCAAG
GCTAAACTTGCCGTTAGTGATCGTAACTCCTCATTGGTGCATATATACGATGCAAGAGCT
GGTACAAATGATCCTATAATATCTAAAGAGGTACAGTTGTGCCCCATCAAAGTCATGAAA
TACAATCATGTCTTTGATACTGTGATATCAGCAGATGACAAAGGGATCATTGAGTACTGG
AGTCCTGCCACACTTCAGTTCCCAGAGAATGTGGTGAATTTTAGATTGAAGAGTGATACT
GATCTCTTTGAAATTGTGAAATGCAAAACTGCTGTTTCTTCTATAGAGGTAAGCCCTGAT
GGTAAACAGTTCTCGGTAACTTCACCAGATCGCAGGATTCGTATATTTTGGTTCAAGACA
GGTAAACTAAGACGTGTGTATGATGAATCTCTTGAGGTGGCACAAGATCTCCAGAGGAGT
GATGTTCCTTTATACCGACTTGAAGCAATTGACTTTGGACGAAGAATGGCTGTGGAAAAA
GAAATTGAGAAAACAGAATATGTACCACAACCTAATGCTGTTTTTGATGAAAGTTCCAAC
TTCATTATATATGCAACTCTCCTAGGAATTAAAGTTATAAATCTACACACCAACAAGGTA
TCTCGTATCCTGGGGAAGGTGGAGAGCAATGATAGATTTTTGAGAATTGCTTTGTATCAA
GGTGATAGAAGTAGTAAAAAAGTAAGAAAAATCCCTGCTGCGGCAGCAAATGCAAATGAA
AGCAAGGAGCCCTTGATAGATCCCACTCTACTTTGCTGTGCTTTCAAGAAACATAGAATC
TATTTGTTCAGTCAGAGAGAACCTGAGGAACCTGATGATCCTACCAAGGGAAGAGATGTC
TTCAATGAAAAGCCACCTCCTGATGAACTTTTGGCTGTATCTGACATTGGGAAGTCCGTT
ACTACATCCCTTCCAGATAATGTGATCATGCATACCAGTATGGGTGACATTCATATGAAG
CTATACCCTGAAGAGTGTCCAAAAACAGTGGAGAACTTTACAACACACTGCAGGAATGGA
TACTATGATAATTTGATATTTCATCGGGTCATCAGAGGCTTTATGGTTCAGACAGGAGAT
CCATTAGGAGATGGCACGGGTGGCCAATCTATTTGGGGAAGGGAGTTTGAAGATGAGTTC
CATAAAAGTCTGCGACATGATAGACCCTTCACTTTCTCTATGGCTAATGCTGGGCCAAAC
ACCAATGGCTCTCAATTCTTCATAACAACTGTTGCCACTCCATGGTTGGACAATAAGCAC
ACAGTTTTTGGCAGAGTGGTGAAAGGAATGGATGTTGTACAGTCCTTAGAGAAAGTGAAG
ACAGACAAAGGTGACAAGCCATACCAGGATGTAAAAATATTGAATGTGACTGTTCCAAAG
TCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013139
PEP Infomation

pacid=37464973 transcript=PGSC0003DMT400019171 locus=PGSC0003DMG400007418 ID=PGSC0003DMT400019171.v4.03 annot-version=v4.03
Sequence

MEEADQNENGNPAAAVEETETVIGPGPAPRARAKRPLQFEQAYLDSLPSANLYEKSYMHR
DVVTHVAVSAADFFISGSTDGHLKFWKKKPIGIEFAKHFRSHLGPIEGLAVSIDGMLCCT
ISSDKSLKIYDVVNYDMMSMIRLPFIPGCVEWVYKQGAVKAKLAVSDRNSSLVHIYDARA
GTNDPIISKEVQLCPIKVMKYNHVFDTVISADDKGIIEYWSPATLQFPENVVNFRLKSDT
DLFEIVKCKTAVSSIEVSPDGKQFSVTSPDRRIRIFWFKTGKLRRVYDESLEVAQDLQRS
DVPLYRLEAIDFGRRMAVEKEIEKTEYVPQPNAVFDESSNFIIYATLLGIKVINLHTNKV
SRILGKVESNDRFLRIALYQGDRSSKKVRKIPAAAANANESKEPLIDPTLLCCAFKKHRI
YLFSQREPEEPDDPTKGRDVFNEKPPPDELLAVSDIGKSVTTSLPDNVIMHTSMGDIHMK
LYPEECPKTVENFTTHCRNGYYDNLIFHRVIRGFMVQTGDPLGDGTGGQSIWGREFEDEF
HKSLRHDRPFTFSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQSLEKVK
TDKGDKPYQDVKILNVTVPKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400019171
Transcript Infomation

pacid=37464973 locus=PGSC0003DMG400007418 ID=PGSC0003DMT400019171.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAGCAGATCAGAATGAGAACGGAAATCCGGCGGCGGCGGTGGAGGAAACCGAA
ACGGTTATTGGACCGGGTCCAGCTCCTCGTGCTCGTGCTAAACGTCCTCTTCAATTTGAG
CAAGCTTATCTCGATTCACTTCCTTCAGCTAACTTGTATGAAAAAAGTTACATGCACCGA
GACGTGGTTACTCATGTTGCTGTTTCAGCAGCAGATTTTTTCATTAGTGGGAGTACTGAT
GGTCACCTGAAATTTTGGAAGAAAAAGCCTATTGGTATCGAGTTTGCAAAACATTTTAGA
TCTCATCTTGGACCAATTGAAGGCCTTGCAGTTAGCATTGATGGTATGCTTTGCTGTACA
ATCTCAAGTGATAAGTCTCTGAAAATATATGACGTAGTGAATTATGACATGATGTCCATG
ATTCGTCTTCCATTCATACCTGGATGTGTTGAATGGGTATATAAACAAGGGGCTGTCAAG
GCTAAACTTGCCGTTAGTGATCGTAACTCCTCATTGGTGCATATATACGATGCAAGAGCT
GGTACAAATGATCCTATAATATCTAAAGAGGTACAGTTGTGCCCCATCAAAGTCATGAAA
TACAATCATGTCTTTGATACTGTGATATCAGCAGATGACAAAGGGATCATTGAGTACTGG
AGTCCTGCCACACTTCAGTTCCCAGAGAATGTGGTGAATTTTAGATTGAAGAGTGATACT
GATCTCTTTGAAATTGTGAAATGCAAAACTGCTGTTTCTTCTATAGAGGTAAGCCCTGAT
GGTAAACAGTTCTCGGTAACTTCACCAGATCGCAGGATTCGTATATTTTGGTTCAAGACA
GGTAAACTAAGACGTGTGTATGATGAATCTCTTGAGGTGGCACAAGATCTCCAGAGGAGT
GATGTTCCTTTATACCGACTTGAAGCAATTGACTTTGGACGAAGAATGGCTGTGGAAAAA
GAAATTGAGAAAACAGAATATGTACCACAACCTAATGCTGTTTTTGATGAAAGTTCCAAC
TTCATTATATATGCAACTCTCCTAGGAATTAAAGTTATAAATCTACACACCAACAAGGTA
TCTCGTATCCTGGGGAAGGTGGAGAGCAATGATAGATTTTTGAGAATTGCTTTGTATCAA
GGTGATAGAAGTAGTAAAAAAGTAAGAAAAATCCCTGCTGCGGCAGCAAATGCAAATGAA
AGCAAGGAGCCCTTGATAGATCCCACTCTACTTTGCTGTGCTTTCAAGAAACATAGAATC
TATTTGTTCAGTCAGAGAGAACCTGAGGAACCTGATGATCCTACCAAGGGAAGAGATGTC
TTCAATGAAAAGCCACCTCCTGATGAACTTTTGGCTGTATCTGACATTGGGAAGTCCGTT
ACTACATCCCTTCCAGATAATGTGATCATGCATACCAGTATGGGTGACATTCATATGAAG
CTATACCCTGAAGAGTGTCCAAAAACAGTGGAGAACTTTACAACACACTGCAGGAATGGA
TACTATGATAATTTGATATTTCATCGGGTCATCAGAGGCTTTATGGTTCAGACAGGAGAT
CCATTAGGAGATGGCACGGGTGGCCAATCTATTTGGGGAAGGGAGTTTGAAGATGAGTTC
CATAAAAGTCTGCGACATGATAGACCCTTCACTTTCTCTATGGCTAATGCTGGGCCAAAC
ACCAATGGCTCTCAATTCTTCATAACAACTGTTGCCACTCCATGGTTGGACAATAAGCAC
ACAGTTTTTGGCAGAGTGGTGAAAGGAATGGATGTTGTACAGTCCTTAGAGAAAGTGAAG
ACAGACAAAGGTGACAAGCCATACCAGGATGTAAAAATATTGAATGTGACTGTTCCAAAG
TCTTAA