Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019126
CDS Infomation

pacid=37464976 polypeptide=PGSC0003DMP400013115 locus=PGSC0003DMG400007405 ID=PGSC0003DMT400019126.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGACTAGTGTTCTCAACTTTCTTGAAAATAGAACCATTCTTGTTACTGGTGCT
ACTGGCTTCTTGGCAAAGATTTTTGTGGAGAAGATTTTAAGGGTTCAACCAAATGTGAAG
AAGCTTTATCTTCTTTTAAGAGCTGCAGATGACAAGTCAGCCATGCAACGTTTCAATAAT
GAGGTTGTGGGAAAGGACTTATTCAAAGTTCTAAGAGAAAAATGTGGGCCAAATTTTACT
ACATTTGTGTCACAAAGGACCACAATTGTACCAGGTGACATAACTTGTGAGAATTTAGGT
GTGAATGACACAAATTTGTTGGAACAAATGTGGAAGGAAGTGGATATTGTTGTTAATCTA
GCTGCAACTACCAATTTTGATGAAAGATATGATGTGGCATTGGGACTTAATACATTTGGA
GCTAGACATGTCCTAAACTTTGCCAAGAAGTGTAATAAATTAAAGGTTCTTCTTCATGTG
TCAACTGCATATGTATGTGGTGAAAAGGAAGGGTTGATGTTGGAAAAACCATATTATATG
GGTGAAACCCTCAATGGGACATTAGGGTTAGATATTGAAGCAGAAAAAAAAGTGATGGAT
GAAAAATTGAAACAACTCAATGCTGAAAATGCTTCTGAAAAATCAATTACAACAACAATG
AAGGAGCTTGGCCTCGAAAGAGCAAGGAAATATGGATGGCCAAATACATATGTATTTACA
AAGGCAATGGGAGAAATGCTTTTGGGAAAATTGAAAGAAGAAGTACCTCTTGTTATTAAT
CGTCCTACCATCATAACTAGCACTTTTAAAGAACCTTTTCCTGGTTGGGTGGAAGGTATC
AGAACTATTGATAGTTTGGCAGTTGGATATGGTAAAGGAAGAATAACTTGCTTCCTTGGC
AATCCTAAAACAATATTGGATGTGATTCCAGCCGATATGGTGGTGAATTCAATGATAGTA
GCCATGATGGCTCATGCTGATCAAAAGGGGAGTGAGACCATATACCAAATTGGATCCTCA
GTTTCAAACCCTTTGAATATCACTAATCTTAGAGATTATGGATTCAATTACTTTAGAAAA
AATCCATGGATCAACAAAGTTGATGGAAAACCTATTATTGTTGGCAAGGTTAATGTTTTG
AGTAGCATGGATAGTTTTCAAAGATACATGGCCCTTCATTACATGCTTCCTTTAAAGGGA
TTGGAGATAGTAAATGCAGCATTTTGTCAATATTTTCAAGGCAAATATTTGGAGCTTTAC
AGGAAAATAAAATTTGTAATGAGATTAATAGACCTTTATGGACCCTATTTATTCCTCAAG
GCAGCATTCGACGATTTAAATACAGAAAAACTACGTATGGCAGCAAAAGAGAGTGGCATT
GAACCAGAAATTTTCTACTTTGATCCCAAGATTATTAATTGGGAAGATTATTTCATGAAA
ATTCATCTTCCTGGAGTTGTTAGATACGTATTTAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013115
PEP Infomation

pacid=37464976 transcript=PGSC0003DMT400019126 locus=PGSC0003DMG400007405 ID=PGSC0003DMT400019126.v4.03 annot-version=v4.03
Sequence

MELTSVLNFLENRTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADDKSAMQRFNN
EVVGKDLFKVLREKCGPNFTTFVSQRTTIVPGDITCENLGVNDTNLLEQMWKEVDIVVNL
AATTNFDERYDVALGLNTFGARHVLNFAKKCNKLKVLLHVSTAYVCGEKEGLMLEKPYYM
GETLNGTLGLDIEAEKKVMDEKLKQLNAENASEKSITTTMKELGLERARKYGWPNTYVFT
KAMGEMLLGKLKEEVPLVINRPTIITSTFKEPFPGWVEGIRTIDSLAVGYGKGRITCFLG
NPKTILDVIPADMVVNSMIVAMMAHADQKGSETIYQIGSSVSNPLNITNLRDYGFNYFRK
NPWINKVDGKPIIVGKVNVLSSMDSFQRYMALHYMLPLKGLEIVNAAFCQYFQGKYLELY
RKIKFVMRLIDLYGPYLFLKAAFDDLNTEKLRMAAKESGIEPEIFYFDPKIINWEDYFMK
IHLPGVVRYVFK*

Transcript Sequence

Transcript ID

PGSC0003DMT400019126
Transcript Infomation

pacid=37464976 locus=PGSC0003DMG400007405 ID=PGSC0003DMT400019126.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGACTAGTGTTCTCAACTTTCTTGAAAATAGAACCATTCTTGTTACTGGTGCT
ACTGGCTTCTTGGCAAAGATTTTTGTGGAGAAGATTTTAAGGGTTCAACCAAATGTGAAG
AAGCTTTATCTTCTTTTAAGAGCTGCAGATGACAAGTCAGCCATGCAACGTTTCAATAAT
GAGGTTGTGGGAAAGGACTTATTCAAAGTTCTAAGAGAAAAATGTGGGCCAAATTTTACT
ACATTTGTGTCACAAAGGACCACAATTGTACCAGGTGACATAACTTGTGAGAATTTAGGT
GTGAATGACACAAATTTGTTGGAACAAATGTGGAAGGAAGTGGATATTGTTGTTAATCTA
GCTGCAACTACCAATTTTGATGAAAGATATGATGTGGCATTGGGACTTAATACATTTGGA
GCTAGACATGTCCTAAACTTTGCCAAGAAGTGTAATAAATTAAAGGTTCTTCTTCATGTG
TCAACTGCATATGTATGTGGTGAAAAGGAAGGGTTGATGTTGGAAAAACCATATTATATG
GGTGAAACCCTCAATGGGACATTAGGGTTAGATATTGAAGCAGAAAAAAAAGTGATGGAT
GAAAAATTGAAACAACTCAATGCTGAAAATGCTTCTGAAAAATCAATTACAACAACAATG
AAGGAGCTTGGCCTCGAAAGAGCAAGGAAATATGGATGGCCAAATACATATGTATTTACA
AAGGCAATGGGAGAAATGCTTTTGGGAAAATTGAAAGAAGAAGTACCTCTTGTTATTAAT
CGTCCTACCATCATAACTAGCACTTTTAAAGAACCTTTTCCTGGTTGGGTGGAAGGTATC
AGAACTATTGATAGTTTGGCAGTTGGATATGGTAAAGGAAGAATAACTTGCTTCCTTGGC
AATCCTAAAACAATATTGGATGTGATTCCAGCCGATATGGTGGTGAATTCAATGATAGTA
GCCATGATGGCTCATGCTGATCAAAAGGGGAGTGAGACCATATACCAAATTGGATCCTCA
GTTTCAAACCCTTTGAATATCACTAATCTTAGAGATTATGGATTCAATTACTTTAGAAAA
AATCCATGGATCAACAAAGTTGATGGAAAACCTATTATTGTTGGCAAGGTTAATGTTTTG
AGTAGCATGGATAGTTTTCAAAGATACATGGCCCTTCATTACATGCTTCCTTTAAAGGGA
TTGGAGATAGTAAATGCAGCATTTTGTCAATATTTTCAAGGCAAATATTTGGAGCTTTAC
AGGAAAATAAAATTTGTAATGAGATTAATAGACCTTTATGGACCCTATTTATTCCTCAAG
GCAGCATTCGACGATTTAAATACAGAAAAACTACGTATGGCAGCAAAAGAGAGTGGCATT
GAACCAGAAATTTTCTACTTTGATCCCAAGATTATTAATTGGGAAGATTATTTCATGAAA
ATTCATCTTCCTGGAGTTGTTAGATACGTATTTAAGTAA