Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019122
CDS Infomation

pacid=37465077 polypeptide=PGSC0003DMP400013112 locus=PGSC0003DMG400007404 ID=PGSC0003DMT400019122.v4.03 annot-version=v4.03
Sequence

ATGATTGCTGAGAAACCTACTTGGATTAGACATGAGAGTATGCAGATTTTCTCCATTGAT
ATTCAGCCAGGTGGCCTTAGGTTTGCCACTGGTGGTGGTGATCATAAGGTTCGGATATGG
AACATGAAATGTGTGGGTAAAGACTTGGAAGCAGATGAATCTACACCAAAACTTCTTGCC
ACACTACGTGATCATTTTGGGTCAGTGAACTGTGTTAGATGGGCAAAACATGGTCGGTAT
GTTGCTTCTGGATCCGATGACCAGGTGATTCAAGTCCATGAGAGGAAACCTGGCTCGGGA
ACCACAGAGTTTGGCAGTGGAGAGCCTCCTGATGTAGAGAACTGGAAAGTTACCATGACA
TTGAGAGGACACACTGCGGATGTGGTGGATCTAAATTGGTCTCCAGACGACTCGACATTG
GCTAGTGGTAGTATGGACAACACCATCCATATCTGGAATATGAGCAATGGTATATGCTCT
GCTGTTCTGAGGGGTCACTCTAGTCTTGTTAAAGGTGTCACCTGGGATCCAATTGGTTCA
TTTATAGCTAGTCAATCAGATGATAAGACTGTCATCATTTGGCGAACAAGTGACTGGAGT
CTTGCTCATAGAACGGAAGGTCACTGGGCAAAATCTCTTGGGTCGACCTTCTTTAGGCGG
CTTGGATGGTCACCCTGTGGACACTATATAACTACTACTCATGGTTTTCAAAAGCCTAGG
CACTCTGCTCCTGTTCTGGAGAGAGGGGAATGGTCTGCCACCTTTGACTTCTTAGGACAC
AATGCTCCTATTATTGTCGTTAAGTTCAATCATTCTATGTTTCGGAGGAATTCGGCTAAT
GCTCAGGAAGTGAAAAATGCTTCTCTTGGATGGTCAAATGGTTCTTCAAAAAGTGGAGGA
AAAGAGTCCCAACCCTACAATGTTATTGCTATAGGAAGTCAAGATCGCACCATAACTGTG
TGGACTACAGCGAGTCCACGTCCTCTTTTTGTTGCCAAGCATTTCTTTGCTCAAAGTGTT
GTGGATTTATCATGGAGCCCTGATGGATATTCACTGTTTGCATGTTCTTTGGATGGAAGT
GTAGCCACTTTCCATTTTGATGAGAAAGAACTAGGTCATCAGCTTTCTGATGCTGAATTA
GAGGAGTTGAAGAGAAGCCGCTATGGTGATGTTAGAGGTCGACAAGCAAATTTAGCCGAA
AGTCCAGCACAACTATTGCTTGAAGCTGCAGCTGCAAAGCAAACTTCAAGCAAAAAACTA
ACTACGGATCTTCCACAAGTTCAAGCAACGTCAAAATCTTCTGTTGATTTGGGTAGTGTG
GTGATTGTTCCCAAACCAAAATCTGATAATGGGAAAAAGACTGAAGGAGTTAACAGTGAT
AGTTTAGCTAAACCCGCAGCTTCTACACGCTTGTCAAGTCCCGTGAAGCAAAGAGAGTAC
AGAAGGCCTGATGGTCGAAAGAGGATAATTCCAGAATCAGTTGGTTTTCCTACCCCGCAG
GAGAACACCTCTGGAATTGCTCAATCTCCTGTCGTTGAATTTCCTAATATGACAGTGGAG
CAGAGTAAAGATGAGAATGGTATGGTACTGTCTGATGCAAGTGTTAGAGAAGTATTTGCA
AGGAAAACAGTTAGTGTCAGTGCTGATCAAAGGGAGCGCTCAGGTGTAACTGCTAGAGGT
ACCATCAGTGATAGCCTCATCATTGAGAAGGTTCCACCTTCTGCAGGCAAGGATGGAAGT
ATCAGCATTGAACAGATGGGAATTGTCAAAGATCCATCTCATTTGGGTACTGGTGGTACA
CTTTTAATCAGGGTTTTTGATAATAAAGAAGGGGTGGACACTGGTCCAATTTGCTTAGAG
GCTCAACCCAGAGAACAAGCTGCCAATGATGTTTTGGGGACAGGAAATTCATTTGTAATG
AAAGAAACTGAGATCCTTTGTTCCAGAGGCGCTCAAACTCTCTGGTCTGACCGGATTACT
GGAAAAGTTACTGTTTTGGCTGGAAATGCCAACTTTTGGGCTGTGGGATGTGAAGATGGC
TGCATTCAGATTTATACAAAATGTGGACGACGTGCCATGCCGACCATGATGATGGGATCT
GCTGCAGTATTTGTTGATTGTGATGAATCTTGGAAGTTTTTGCTCGTCACAAGGAAAGGG
TCATTGCATCTTTGGGATCTATTCAACCGGAAGTGTCTCCTTCAAGACTCATTGGCGTCC
CTTATGAACTCAGATCCCAAGGCAAATGCAGGCACAATCAAAGTGATAACAGCAAAATTA
TCAAAATCTGGTTTTCCTCTTGTTGTCCTGGCCACACGGCATGCATACCTCTTTGATATG
AGCCTCATGTGCTGGCTGAGGGTTGCAGATGATTGTTTTCCGGCTTCGAATTTTTCAAGC
TCCTGGAGTTCGGGCTCATTGCATGGTGGTGAACTAGCGGCACTGCAGGTGGATGTTAAG
AAGTTCCTGGCTAGAAGACCTGGCTGGAGCAGAGTCACTGATGATGGGGTACAAACACGT
GCTCATTTGGAGTCTCAATTGGCGTCTGCTCTTGCTTTGAAGTCTCCTAGTGAATATCGT
CAATGCCTTTTATCCTATGTTCGGTTTTTAGCAAGAGAGGCAGATGAATCACGCTTGAGA
GAAGTTTGCGAGAACTTTCTTGGGCCTCCCACAGGGATGGCTGATGCTGCATCCTCTACG
TCAAATATACCTGCTTGGGACCCTTGTGTATTTGGTATGAAAAAACAGAGACTCCTTAGA
GAAGACATACTTCCAGCAATGGCCTCAAATAGAAAAGTACAGCGGCTGCTCAACGAGTTC
ATGGATCTCCTATCAGAATATGAGATACCTGACACAAATCTTGAACAGAGCAACATCGCA
ACCACCACATCAACTGGAATGAATCTTGAACAGACCAATGGTGCAACCACTACAGATAAA
ATGGATACTGATCTCCCTATGACTCAAAGAACAGCTCCCAAGACACTAATAACTGATCCG
ACACCTTCCACAACTGTTAATGACCGAGACGATCCTGCTCCTCCTGCAGTACAATCAACT
GATCATGTTGAGCCTTCTACACCATTGAAAGATCCTATGGACTCCGCTCAAGAAGGAGCT
GATGAAGCTAAATCTGTACCACCTCCAACAGATCAAATGAATTTGGATCCACCTGCATCA
GTTGAATCGGAACCATTTCCGTCACCAAAGGAGAAGGTTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400013112
PEP Infomation

pacid=37465077 transcript=PGSC0003DMT400019122 locus=PGSC0003DMG400007404 ID=PGSC0003DMT400019122.v4.03 annot-version=v4.03
Sequence

MIAEKPTWIRHESMQIFSIDIQPGGLRFATGGGDHKVRIWNMKCVGKDLEADESTPKLLA
TLRDHFGSVNCVRWAKHGRYVASGSDDQVIQVHERKPGSGTTEFGSGEPPDVENWKVTMT
LRGHTADVVDLNWSPDDSTLASGSMDNTIHIWNMSNGICSAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTEGHWAKSLGSTFFRRLGWSPCGHYITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPIIVVKFNHSMFRRNSANAQEVKNASLGWSNGSSKSGG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFAQSVVDLSWSPDGYSLFACSLDGS
VATFHFDEKELGHQLSDAELEELKRSRYGDVRGRQANLAESPAQLLLEAAAAKQTSSKKL
TTDLPQVQATSKSSVDLGSVVIVPKPKSDNGKKTEGVNSDSLAKPAASTRLSSPVKQREY
RRPDGRKRIIPESVGFPTPQENTSGIAQSPVVEFPNMTVEQSKDENGMVLSDASVREVFA
RKTVSVSADQRERSGVTARGTISDSLIIEKVPPSAGKDGSISIEQMGIVKDPSHLGTGGT
LLIRVFDNKEGVDTGPICLEAQPREQAANDVLGTGNSFVMKETEILCSRGAQTLWSDRIT
GKVTVLAGNANFWAVGCEDGCIQIYTKCGRRAMPTMMMGSAAVFVDCDESWKFLLVTRKG
SLHLWDLFNRKCLLQDSLASLMNSDPKANAGTIKVITAKLSKSGFPLVVLATRHAYLFDM
SLMCWLRVADDCFPASNFSSSWSSGSLHGGELAALQVDVKKFLARRPGWSRVTDDGVQTR
AHLESQLASALALKSPSEYRQCLLSYVRFLAREADESRLREVCENFLGPPTGMADAASST
SNIPAWDPCVFGMKKQRLLREDILPAMASNRKVQRLLNEFMDLLSEYEIPDTNLEQSNIA
TTTSTGMNLEQTNGATTTDKMDTDLPMTQRTAPKTLITDPTPSTTVNDRDDPAPPAVQST
DHVEPSTPLKDPMDSAQEGADEAKSVPPPTDQMNLDPPASVESEPFPSPKEKVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400019122
Transcript Infomation

pacid=37465077 locus=PGSC0003DMG400007404 ID=PGSC0003DMT400019122.v4.03 annot-version=v4.03
Sequence

ATGATTGCTGAGAAACCTACTTGGATTAGACATGAGAGTATGCAGATTTTCTCCATTGAT
ATTCAGCCAGGTGGCCTTAGGTTTGCCACTGGTGGTGGTGATCATAAGGTTCGGATATGG
AACATGAAATGTGTGGGTAAAGACTTGGAAGCAGATGAATCTACACCAAAACTTCTTGCC
ACACTACGTGATCATTTTGGGTCAGTGAACTGTGTTAGATGGGCAAAACATGGTCGGTAT
GTTGCTTCTGGATCCGATGACCAGGTGATTCAAGTCCATGAGAGGAAACCTGGCTCGGGA
ACCACAGAGTTTGGCAGTGGAGAGCCTCCTGATGTAGAGAACTGGAAAGTTACCATGACA
TTGAGAGGACACACTGCGGATGTGGTGGATCTAAATTGGTCTCCAGACGACTCGACATTG
GCTAGTGGTAGTATGGACAACACCATCCATATCTGGAATATGAGCAATGGTATATGCTCT
GCTGTTCTGAGGGGTCACTCTAGTCTTGTTAAAGGTGTCACCTGGGATCCAATTGGTTCA
TTTATAGCTAGTCAATCAGATGATAAGACTGTCATCATTTGGCGAACAAGTGACTGGAGT
CTTGCTCATAGAACGGAAGGTCACTGGGCAAAATCTCTTGGGTCGACCTTCTTTAGGCGG
CTTGGATGGTCACCCTGTGGACACTATATAACTACTACTCATGGTTTTCAAAAGCCTAGG
CACTCTGCTCCTGTTCTGGAGAGAGGGGAATGGTCTGCCACCTTTGACTTCTTAGGACAC
AATGCTCCTATTATTGTCGTTAAGTTCAATCATTCTATGTTTCGGAGGAATTCGGCTAAT
GCTCAGGAAGTGAAAAATGCTTCTCTTGGATGGTCAAATGGTTCTTCAAAAAGTGGAGGA
AAAGAGTCCCAACCCTACAATGTTATTGCTATAGGAAGTCAAGATCGCACCATAACTGTG
TGGACTACAGCGAGTCCACGTCCTCTTTTTGTTGCCAAGCATTTCTTTGCTCAAAGTGTT
GTGGATTTATCATGGAGCCCTGATGGATATTCACTGTTTGCATGTTCTTTGGATGGAAGT
GTAGCCACTTTCCATTTTGATGAGAAAGAACTAGGTCATCAGCTTTCTGATGCTGAATTA
GAGGAGTTGAAGAGAAGCCGCTATGGTGATGTTAGAGGTCGACAAGCAAATTTAGCCGAA
AGTCCAGCACAACTATTGCTTGAAGCTGCAGCTGCAAAGCAAACTTCAAGCAAAAAACTA
ACTACGGATCTTCCACAAGTTCAAGCAACGTCAAAATCTTCTGTTGATTTGGGTAGTGTG
GTGATTGTTCCCAAACCAAAATCTGATAATGGGAAAAAGACTGAAGGAGTTAACAGTGAT
AGTTTAGCTAAACCCGCAGCTTCTACACGCTTGTCAAGTCCCGTGAAGCAAAGAGAGTAC
AGAAGGCCTGATGGTCGAAAGAGGATAATTCCAGAATCAGTTGGTTTTCCTACCCCGCAG
GAGAACACCTCTGGAATTGCTCAATCTCCTGTCGTTGAATTTCCTAATATGACAGTGGAG
CAGAGTAAAGATGAGAATGGTATGGTACTGTCTGATGCAAGTGTTAGAGAAGTATTTGCA
AGGAAAACAGTTAGTGTCAGTGCTGATCAAAGGGAGCGCTCAGGTGTAACTGCTAGAGGT
ACCATCAGTGATAGCCTCATCATTGAGAAGGTTCCACCTTCTGCAGGCAAGGATGGAAGT
ATCAGCATTGAACAGATGGGAATTGTCAAAGATCCATCTCATTTGGGTACTGGTGGTACA
CTTTTAATCAGGGTTTTTGATAATAAAGAAGGGGTGGACACTGGTCCAATTTGCTTAGAG
GCTCAACCCAGAGAACAAGCTGCCAATGATGTTTTGGGGACAGGAAATTCATTTGTAATG
AAAGAAACTGAGATCCTTTGTTCCAGAGGCGCTCAAACTCTCTGGTCTGACCGGATTACT
GGAAAAGTTACTGTTTTGGCTGGAAATGCCAACTTTTGGGCTGTGGGATGTGAAGATGGC
TGCATTCAGATTTATACAAAATGTGGACGACGTGCCATGCCGACCATGATGATGGGATCT
GCTGCAGTATTTGTTGATTGTGATGAATCTTGGAAGTTTTTGCTCGTCACAAGGAAAGGG
TCATTGCATCTTTGGGATCTATTCAACCGGAAGTGTCTCCTTCAAGACTCATTGGCGTCC
CTTATGAACTCAGATCCCAAGGCAAATGCAGGCACAATCAAAGTGATAACAGCAAAATTA
TCAAAATCTGGTTTTCCTCTTGTTGTCCTGGCCACACGGCATGCATACCTCTTTGATATG
AGCCTCATGTGCTGGCTGAGGGTTGCAGATGATTGTTTTCCGGCTTCGAATTTTTCAAGC
TCCTGGAGTTCGGGCTCATTGCATGGTGGTGAACTAGCGGCACTGCAGGTGGATGTTAAG
AAGTTCCTGGCTAGAAGACCTGGCTGGAGCAGAGTCACTGATGATGGGGTACAAACACGT
GCTCATTTGGAGTCTCAATTGGCGTCTGCTCTTGCTTTGAAGTCTCCTAGTGAATATCGT
CAATGCCTTTTATCCTATGTTCGGTTTTTAGCAAGAGAGGCAGATGAATCACGCTTGAGA
GAAGTTTGCGAGAACTTTCTTGGGCCTCCCACAGGGATGGCTGATGCTGCATCCTCTACG
TCAAATATACCTGCTTGGGACCCTTGTGTATTTGGTATGAAAAAACAGAGACTCCTTAGA
GAAGACATACTTCCAGCAATGGCCTCAAATAGAAAAGTACAGCGGCTGCTCAACGAGTTC
ATGGATCTCCTATCAGAATATGAGATACCTGACACAAATCTTGAACAGAGCAACATCGCA
ACCACCACATCAACTGGAATGAATCTTGAACAGACCAATGGTGCAACCACTACAGATAAA
ATGGATACTGATCTCCCTATGACTCAAAGAACAGCTCCCAAGACACTAATAACTGATCCG
ACACCTTCCACAACTGTTAATGACCGAGACGATCCTGCTCCTCCTGCAGTACAATCAACT
GATCATGTTGAGCCTTCTACACCATTGAAAGATCCTATGGACTCCGCTCAAGAAGGAGCT
GATGAAGCTAAATCTGTACCACCTCCAACAGATCAAATGAATTTGGATCCACCTGCATCA
GTTGAATCGGAACCATTTCCGTCACCAAAGGAGAAGGTTTCTTGA