Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019063
CDS Infomation

pacid=37469045 polypeptide=PGSC0003DMP400013083 locus=PGSC0003DMG400007390 ID=PGSC0003DMT400019063.v4.03 annot-version=v4.03
Sequence

ATGGCTCGAGAAGAACATCTTCTATCGACGGATATTGTGAACCGAGGGATATCGGATGAG
GGATCACAAACGTTCTCCGTTAGGGTACAGAGGCGTTTGCCCGATTTCTTGCAATCAGTT
AACTTAAAATATGTGAAGTTAGGGTATCATTACTTGATAAAACATGGGATATATTTGGCT
ATATTGCCAGTGTTGGTGTTGGTTTTCAGTGCTGAAGTTGGGAGTCTAAGTAGAGAGGAG
TTATGGAGGAAAGTTTGGGATAGCACAACACGTTATGATTTGGCTACAGTGTTGTCATTT
GTGGCACTCTTTGTCTTCACTATCTCTCTTTATATCATGTCTAAGCCAAGACCTATTTAC
CTTCTTGATTTTGCATGTTACAAGCCAAGTGATGATCTTAAGGTAACAAAGGAACAATTC
ATCGAGTTAGCACGAAATTCGGGTAAATTCAATGAATCAAGTCTAGAATTTCAGAAAAGA
ATTCTAGAATCCTCTGGAATTGGGGATGAGACTTACGTCCCCAAATCCATTGGATCATCA
GAAAACACAGCCACCATGAAAGAAGGACGATTCGAGGCATCAACGGTGATGTTCGGAGCA
CTCGATGAACTTTTCGAGAAGACGAAAATTCGCCCGAAAGACGTCGGAGTATTGGTGGTG
AATTGCAGTATTTTCAACCCAACACCATCACTTTCAGCCATGATAATAAATCACTATAAA
ATGAGGGGAAATATTCTTAGTTTTAATTTAGGTGGAATGGGTTGTAGCGCTGGAATAATA
GCGTTAGATTTGGCACGTGACATGTTACAAGCTAACCCTAATAATTACGCGATCGTGATT
AGTGGTGAGATGGTTGGATATAATTGGTACCCCGGTAATGAGCGGTCCATGCTTATTCCG
AATTGCTTTTTTCGAATGGGTTGCTCCGCCCTCCTCCTCTCTAATCGTCGTCGCGACTAC
CACCGTGCTAAGTACAGCCTCGAACACATCGTGAGGACACATAAAGCTTCCAATGATCGT
GCATTCAGGTGCATTTACCAAGAAGAAGATAGCCAACGTTACAAGGGGCTAAAGATAAGC
AAAGATTTAGTAGAAGTTGGAGGAGATGCATTGAAGACTAATATTACTACATTAGGCCCT
TTGGTTCTACCTTTATCAGAACAACTATTCTTCTTTGGAAACTTAGTTTGGAGGCACTTA
TTTGGCAATAAAAATGCCAAAACAAATAATAACAACAATAACAATTCCCAGCAGGCCAAT
AATATCAAACCCTATATTCCAGACTACAAACTTGCCTTTGAGCACTTTTGTGTCTATGCA
GCCAGCAAAACTGTCCTTGATGAGCTTCAAAGAAACCTAGAGTTGAGTGAGGAAAACATG
GAAGCATCACGCGCCACGCTCCATCGATTTGGTAACACGTCTAGTAGTAGCATTTGGTAC
GAGTTGGCTTATTTGGAGGCTAAGGAGAAAATCAGAAGAGGCGATCGTGTGTGGCAAATT
GCATTTGGGTCAGGTTTTAAGTGTAACAGTGCGGTTTGGAAAGCTATTCGTCGCGTTAAG
AAGCCTTCAACGAATCCTTGGCTTGGTTGCGTTGATAGGTATCCAGAGTCTCTCACACAA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400013083
PEP Infomation

pacid=37469045 transcript=PGSC0003DMT400019063 locus=PGSC0003DMG400007390 ID=PGSC0003DMT400019063.v4.03 annot-version=v4.03
Sequence

MAREEHLLSTDIVNRGISDEGSQTFSVRVQRRLPDFLQSVNLKYVKLGYHYLIKHGIYLA
ILPVLVLVFSAEVGSLSREELWRKVWDSTTRYDLATVLSFVALFVFTISLYIMSKPRPIY
LLDFACYKPSDDLKVTKEQFIELARNSGKFNESSLEFQKRILESSGIGDETYVPKSIGSS
ENTATMKEGRFEASTVMFGALDELFEKTKIRPKDVGVLVVNCSIFNPTPSLSAMIINHYK
MRGNILSFNLGGMGCSAGIIALDLARDMLQANPNNYAIVISGEMVGYNWYPGNERSMLIP
NCFFRMGCSALLLSNRRRDYHRAKYSLEHIVRTHKASNDRAFRCIYQEEDSQRYKGLKIS
KDLVEVGGDALKTNITTLGPLVLPLSEQLFFFGNLVWRHLFGNKNAKTNNNNNNNSQQAN
NIKPYIPDYKLAFEHFCVYAASKTVLDELQRNLELSEENMEASRATLHRFGNTSSSSIWY
ELAYLEAKEKIRRGDRVWQIAFGSGFKCNSAVWKAIRRVKKPSTNPWLGCVDRYPESLTQ
*

Transcript Sequence

Transcript ID

PGSC0003DMT400019063
Transcript Infomation

pacid=37469045 locus=PGSC0003DMG400007390 ID=PGSC0003DMT400019063.v4.03 annot-version=v4.03
Sequence

ATGGCTCGAGAAGAACATCTTCTATCGACGGATATTGTGAACCGAGGGATATCGGATGAG
GGATCACAAACGTTCTCCGTTAGGGTACAGAGGCGTTTGCCCGATTTCTTGCAATCAGTT
AACTTAAAATATGTGAAGTTAGGGTATCATTACTTGATAAAACATGGGATATATTTGGCT
ATATTGCCAGTGTTGGTGTTGGTTTTCAGTGCTGAAGTTGGGAGTCTAAGTAGAGAGGAG
TTATGGAGGAAAGTTTGGGATAGCACAACACGTTATGATTTGGCTACAGTGTTGTCATTT
GTGGCACTCTTTGTCTTCACTATCTCTCTTTATATCATGTCTAAGCCAAGACCTATTTAC
CTTCTTGATTTTGCATGTTACAAGCCAAGTGATGATCTTAAGGTAACAAAGGAACAATTC
ATCGAGTTAGCACGAAATTCGGGTAAATTCAATGAATCAAGTCTAGAATTTCAGAAAAGA
ATTCTAGAATCCTCTGGAATTGGGGATGAGACTTACGTCCCCAAATCCATTGGATCATCA
GAAAACACAGCCACCATGAAAGAAGGACGATTCGAGGCATCAACGGTGATGTTCGGAGCA
CTCGATGAACTTTTCGAGAAGACGAAAATTCGCCCGAAAGACGTCGGAGTATTGGTGGTG
AATTGCAGTATTTTCAACCCAACACCATCACTTTCAGCCATGATAATAAATCACTATAAA
ATGAGGGGAAATATTCTTAGTTTTAATTTAGGTGGAATGGGTTGTAGCGCTGGAATAATA
GCGTTAGATTTGGCACGTGACATGTTACAAGCTAACCCTAATAATTACGCGATCGTGATT
AGTGGTGAGATGGTTGGATATAATTGGTACCCCGGTAATGAGCGGTCCATGCTTATTCCG
AATTGCTTTTTTCGAATGGGTTGCTCCGCCCTCCTCCTCTCTAATCGTCGTCGCGACTAC
CACCGTGCTAAGTACAGCCTCGAACACATCGTGAGGACACATAAAGCTTCCAATGATCGT
GCATTCAGGTGCATTTACCAAGAAGAAGATAGCCAACGTTACAAGGGGCTAAAGATAAGC
AAAGATTTAGTAGAAGTTGGAGGAGATGCATTGAAGACTAATATTACTACATTAGGCCCT
TTGGTTCTACCTTTATCAGAACAACTATTCTTCTTTGGAAACTTAGTTTGGAGGCACTTA
TTTGGCAATAAAAATGCCAAAACAAATAATAACAACAATAACAATTCCCAGCAGGCCAAT
AATATCAAACCCTATATTCCAGACTACAAACTTGCCTTTGAGCACTTTTGTGTCTATGCA
GCCAGCAAAACTGTCCTTGATGAGCTTCAAAGAAACCTAGAGTTGAGTGAGGAAAACATG
GAAGCATCACGCGCCACGCTCCATCGATTTGGTAACACGTCTAGTAGTAGCATTTGGTAC
GAGTTGGCTTATTTGGAGGCTAAGGAGAAAATCAGAAGAGGCGATCGTGTGTGGCAAATT
GCATTTGGGTCAGGTTTTAAGTGTAACAGTGCGGTTTGGAAAGCTATTCGTCGCGTTAAG
AAGCCTTCAACGAATCCTTGGCTTGGTTGCGTTGATAGGTATCCAGAGTCTCTCACACAA
TAA