Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400019055
CDS Infomation

pacid=37470612 polypeptide=PGSC0003DMP400013075 locus=PGSC0003DMG400007385 ID=PGSC0003DMT400019055.v4.03 annot-version=v4.03
Sequence

ATGGATATTGCAGTTTCAGTGGTGCAATGGTGTTGTGGTAAGCCTTTGGCTTGGGCATGG
GATGAGGTGAAAAAACAGTGTCTTTACTGTATAAAATATAAAGAAAATGCAGAGGCTTTT
GAGAGTGAGGCTACAGAATTCCTAGAAAAAGTTCAACGCCTCGAAGAGGCCGTCCAAAGA
AGTGGACGACACAGCATCAGGGAAGAGCTTCATAGACAGCTTGATAAAGCCAGAGATGTC
AAGAATAAGGTGAATGTTCTAACAAGCGATATGGAGACAGCAACAAGTACTGGTTGCATC
TCCAACTATAAGCTTAGTAAAAGAATTGTTAAACTGAGAAAAGCTATGATGCAGCTGCTA
CAAGATCCGGAATTCATTTCAGCAGTATCTCTGCAACCACAAGCAATTAGGCCGCGCTCT
CGTGCTGAACGGCCTGATGATTTTCTTTATTTCCCCTCAAGAAAGCCAACCATGGATGAG
ATCATGAATGCCCTGAAAGATGAGGGGCGTAGCACCGTACAAGTATATGGCATGGGAGGT
GTGGGTAAAACCTACATGGTAAAAGCATTGGCAAGTCGAGCTTTGAAGGAAAAAAAATTC
GATCAGGTTGTGGTATCAGTCGTCTCGCAAACTGTTGATTTGAGGAAAATTCAAGGGGAC
ATTGCTCATGGCTTGGGGGAGGAACTTACCTCCACTGAAGTGCAAGATCGTGCGGATGAC
CTTAGGAACATTTTGAATGACCACGGTAACATCCTGTTGATCTTGGATGACTTGTGGGAC
ACAATAAACCTATCAACCATTGGGATACCACAATATTCCGAGAGCTGCAAATGCAAGATC
TTAATCACTACAAGGCAGATGAATGTGTGTGACGATCTGGATAGGCAGTACTCCGCCATC
CAAATCAAAGTCCTTTCAGGCGATGATCCTTGGACATTGTTCACTCAAAAAGCAGGAGAT
AATCTGAAGGTGCCGCCTGGTTTTGAAGAGATAGGGAAGAAAATTGTTGAGGAATGCAGG
GGATTGCCAATAGCACTTTCAACCATTGGAAGTGCACTGTACAAGAAGGACTTGACATAT
TGGGAAACGGCAGCTACACGTCTCCAGAGTTCTAAAACTGCATCCATTAAAGAAGATGAT
CTCAACTCTGTCATCAGAAAATGCATAGAACTGAGCTACAGTTTCTTGCCAAATGATACG
TGCAAGCGGGTTTTCCAGATGTGCTCCTTCTTTCCTGAAGATTATAATATCCCCAAGGAA
ACCTTGACAAGGTATGGCATGGGACTGGCCTTAATCCCAAACATCGAGAGAGTCAAAGAA
GCAAGAGGTGATATTCATCAAACAGTCGAAGAACTCAAAGCTGCTTCTTTGCTCTTAGAT
GGCGATAAGGAGGAGACTGTCAAAATGCACGATGTTATACGTGATATTTCAATACAAATA
GGATACAACCAGGAGAAACCCAAGAGCATTGTTAAAGCAAGCATGAAATTGGAGAACTGG
CCAGGGGAAATCTTAACCAACTCATGTGGAGCAATCTCACTCATATCGAATCATCTTAAA
AGGCTACCTGATAGAGTAGACTGCCCTGAAACTGAGATTCTATTGCTTCAGGATAACAAG
AACTTAAGGTTAGTTCCAGATGAATTCTTCCAAGGTATGAGAGCTCTAAAAGTCTTGGAT
TTTACTGGTGTAAAATTCAAGTCCTTACCCTCCTCAACTCAGCAGTTGTCGCTTCTTCGC
TTACTCTCTTTGGATAATTGCAGATTCCTAAAAGATGTATCTATGATTGGAGAACTTAAC
AGGCTTGAAATTTTGACTCTAAGAATGTCGGGGATCACATCATTGCCTGAAAGTTTTGCA
AACTTGAAAGAGCTACGGATTCTAGATATTACCTTATCTCTTCAATGTGAAAATGTCCCA
CCAGGAGTAATATCTAGCATGGATAAGTTAGAAGAGTTATACATGCAAGGCTGCTTTGCA
GATTGGGAAATTACAAATGAAAACAGGAAAGCTAACTTCCAAGAGATATTGACCTTGGGT
AGCTTGACAATCTTGAAAGTAGATATCAAGAATGTTTGTTGCCTACCTCCTGATAGTGTT
GCTCCTAATTGGGAGAAATTTGATATATGTGTTAGTGATTCAGACCAACGCAGGTTCGCC
AACGCAACACATGAGGCCTCATTTACTAGAGGGTTGGCAACTGGCGTCACGTTGGAAGCA
TTTCCAGAATGGTTTAGGCAGGCAGTAGCACACAAAGTAGAGAAGCTGAGCTACCAATTA
TGTGGTAATTTGAGCAATATTCTGCAAGAATACCACCATGGAAATTTTGATGGAGTGAAA
TCTCTATATGTAGACCAGTGCGTTGACATTGCCCAATTGATAAGGTTGGGAAATGAATTA
CCAAATCAACCAGTGTTCCCTCAACTGGAGAAGCTGAACATTCACCACATGCAAAAAACG
GAAGGCATCTGTGTCGAGGAGTTACTACCTGGATCTTTACAAAAAGTCAGAACTCTGGAG
GTCGGAGAGTGTCCTAATTTGAAAGATTCACTCCTTCCTCCTAATTTAATTCAAAGAATG
CCAAATCTTGAAGAAGTTAAGGTAACAGGAACCTCAATCAATGCTGTGTTTGGATTTGAC
GGCATCACATTCCAAGGTGGACAATTAAGGAAGTTGAACAGATTGACACTGCAGAATCTT
TCTCAACTAACTAGCCTATGGAAGGGTCCTAGTGAATTAGTTATGTTCCACAGGCTAGAA
GTTGTTAAAGTTTCACAATGTGAAAACCTCAGGTATATCTTCCCTTACGCCGTTTCTGAT
TACCTTTGTCATTTACAAGTACTATGGCTAGAAGATTGCAGTGGTTTGGAGAAAGTGATA
GGTGGTCACACAGATGAAGTACCAGAAAGCATAACTCTCCCAAGACTAACTACTTTGAGG
CTTCAACGTCTACCACATCTCACAGATTTCTACACTCAAGAGGCATATTTACGTTGCCCT
GAATTGCAAAGACTGCATAAACAGGATTGCAAAAGATTGAGAACTAACCTCTCTGATTAC
CATAGTGATCAGGAAATCCAAGAAAAGAGCAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400013075
PEP Infomation

pacid=37470612 transcript=PGSC0003DMT400019055 locus=PGSC0003DMG400007385 ID=PGSC0003DMT400019055.v4.03 annot-version=v4.03
Sequence

MDIAVSVVQWCCGKPLAWAWDEVKKQCLYCIKYKENAEAFESEATEFLEKVQRLEEAVQR
SGRHSIREELHRQLDKARDVKNKVNVLTSDMETATSTGCISNYKLSKRIVKLRKAMMQLL
QDPEFISAVSLQPQAIRPRSRAERPDDFLYFPSRKPTMDEIMNALKDEGRSTVQVYGMGG
VGKTYMVKALASRALKEKKFDQVVVSVVSQTVDLRKIQGDIAHGLGEELTSTEVQDRADD
LRNILNDHGNILLILDDLWDTINLSTIGIPQYSESCKCKILITTRQMNVCDDLDRQYSAI
QIKVLSGDDPWTLFTQKAGDNLKVPPGFEEIGKKIVEECRGLPIALSTIGSALYKKDLTY
WETAATRLQSSKTASIKEDDLNSVIRKCIELSYSFLPNDTCKRVFQMCSFFPEDYNIPKE
TLTRYGMGLALIPNIERVKEARGDIHQTVEELKAASLLLDGDKEETVKMHDVIRDISIQI
GYNQEKPKSIVKASMKLENWPGEILTNSCGAISLISNHLKRLPDRVDCPETEILLLQDNK
NLRLVPDEFFQGMRALKVLDFTGVKFKSLPSSTQQLSLLRLLSLDNCRFLKDVSMIGELN
RLEILTLRMSGITSLPESFANLKELRILDITLSLQCENVPPGVISSMDKLEELYMQGCFA
DWEITNENRKANFQEILTLGSLTILKVDIKNVCCLPPDSVAPNWEKFDICVSDSDQRRFA
NATHEASFTRGLATGVTLEAFPEWFRQAVAHKVEKLSYQLCGNLSNILQEYHHGNFDGVK
SLYVDQCVDIAQLIRLGNELPNQPVFPQLEKLNIHHMQKTEGICVEELLPGSLQKVRTLE
VGECPNLKDSLLPPNLIQRMPNLEEVKVTGTSINAVFGFDGITFQGGQLRKLNRLTLQNL
SQLTSLWKGPSELVMFHRLEVVKVSQCENLRYIFPYAVSDYLCHLQVLWLEDCSGLEKVI
GGHTDEVPESITLPRLTTLRLQRLPHLTDFYTQEAYLRCPELQRLHKQDCKRLRTNLSDY
HSDQEIQEKSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400019055
Transcript Infomation

pacid=37470612 locus=PGSC0003DMG400007385 ID=PGSC0003DMT400019055.v4.03 annot-version=v4.03
Sequence

ATGGATATTGCAGTTTCAGTGGTGCAATGGTGTTGTGGTAAGCCTTTGGCTTGGGCATGG
GATGAGGTGAAAAAACAGTGTCTTTACTGTATAAAATATAAAGAAAATGCAGAGGCTTTT
GAGAGTGAGGCTACAGAATTCCTAGAAAAAGTTCAACGCCTCGAAGAGGCCGTCCAAAGA
AGTGGACGACACAGCATCAGGGAAGAGCTTCATAGACAGCTTGATAAAGCCAGAGATGTC
AAGAATAAGGTGAATGTTCTAACAAGCGATATGGAGACAGCAACAAGTACTGGTTGCATC
TCCAACTATAAGCTTAGTAAAAGAATTGTTAAACTGAGAAAAGCTATGATGCAGCTGCTA
CAAGATCCGGAATTCATTTCAGCAGTATCTCTGCAACCACAAGCAATTAGGCCGCGCTCT
CGTGCTGAACGGCCTGATGATTTTCTTTATTTCCCCTCAAGAAAGCCAACCATGGATGAG
ATCATGAATGCCCTGAAAGATGAGGGGCGTAGCACCGTACAAGTATATGGCATGGGAGGT
GTGGGTAAAACCTACATGGTAAAAGCATTGGCAAGTCGAGCTTTGAAGGAAAAAAAATTC
GATCAGGTTGTGGTATCAGTCGTCTCGCAAACTGTTGATTTGAGGAAAATTCAAGGGGAC
ATTGCTCATGGCTTGGGGGAGGAACTTACCTCCACTGAAGTGCAAGATCGTGCGGATGAC
CTTAGGAACATTTTGAATGACCACGGTAACATCCTGTTGATCTTGGATGACTTGTGGGAC
ACAATAAACCTATCAACCATTGGGATACCACAATATTCCGAGAGCTGCAAATGCAAGATC
TTAATCACTACAAGGCAGATGAATGTGTGTGACGATCTGGATAGGCAGTACTCCGCCATC
CAAATCAAAGTCCTTTCAGGCGATGATCCTTGGACATTGTTCACTCAAAAAGCAGGAGAT
AATCTGAAGGTGCCGCCTGGTTTTGAAGAGATAGGGAAGAAAATTGTTGAGGAATGCAGG
GGATTGCCAATAGCACTTTCAACCATTGGAAGTGCACTGTACAAGAAGGACTTGACATAT
TGGGAAACGGCAGCTACACGTCTCCAGAGTTCTAAAACTGCATCCATTAAAGAAGATGAT
CTCAACTCTGTCATCAGAAAATGCATAGAACTGAGCTACAGTTTCTTGCCAAATGATACG
TGCAAGCGGGTTTTCCAGATGTGCTCCTTCTTTCCTGAAGATTATAATATCCCCAAGGAA
ACCTTGACAAGGTATGGCATGGGACTGGCCTTAATCCCAAACATCGAGAGAGTCAAAGAA
GCAAGAGGTGATATTCATCAAACAGTCGAAGAACTCAAAGCTGCTTCTTTGCTCTTAGAT
GGCGATAAGGAGGAGACTGTCAAAATGCACGATGTTATACGTGATATTTCAATACAAATA
GGATACAACCAGGAGAAACCCAAGAGCATTGTTAAAGCAAGCATGAAATTGGAGAACTGG
CCAGGGGAAATCTTAACCAACTCATGTGGAGCAATCTCACTCATATCGAATCATCTTAAA
AGGCTACCTGATAGAGTAGACTGCCCTGAAACTGAGATTCTATTGCTTCAGGATAACAAG
AACTTAAGGTTAGTTCCAGATGAATTCTTCCAAGGTATGAGAGCTCTAAAAGTCTTGGAT
TTTACTGGTGTAAAATTCAAGTCCTTACCCTCCTCAACTCAGCAGTTGTCGCTTCTTCGC
TTACTCTCTTTGGATAATTGCAGATTCCTAAAAGATGTATCTATGATTGGAGAACTTAAC
AGGCTTGAAATTTTGACTCTAAGAATGTCGGGGATCACATCATTGCCTGAAAGTTTTGCA
AACTTGAAAGAGCTACGGATTCTAGATATTACCTTATCTCTTCAATGTGAAAATGTCCCA
CCAGGAGTAATATCTAGCATGGATAAGTTAGAAGAGTTATACATGCAAGGCTGCTTTGCA
GATTGGGAAATTACAAATGAAAACAGGAAAGCTAACTTCCAAGAGATATTGACCTTGGGT
AGCTTGACAATCTTGAAAGTAGATATCAAGAATGTTTGTTGCCTACCTCCTGATAGTGTT
GCTCCTAATTGGGAGAAATTTGATATATGTGTTAGTGATTCAGACCAACGCAGGTTCGCC
AACGCAACACATGAGGCCTCATTTACTAGAGGGTTGGCAACTGGCGTCACGTTGGAAGCA
TTTCCAGAATGGTTTAGGCAGGCAGTAGCACACAAAGTAGAGAAGCTGAGCTACCAATTA
TGTGGTAATTTGAGCAATATTCTGCAAGAATACCACCATGGAAATTTTGATGGAGTGAAA
TCTCTATATGTAGACCAGTGCGTTGACATTGCCCAATTGATAAGGTTGGGAAATGAATTA
CCAAATCAACCAGTGTTCCCTCAACTGGAGAAGCTGAACATTCACCACATGCAAAAAACG
GAAGGCATCTGTGTCGAGGAGTTACTACCTGGATCTTTACAAAAAGTCAGAACTCTGGAG
GTCGGAGAGTGTCCTAATTTGAAAGATTCACTCCTTCCTCCTAATTTAATTCAAAGAATG
CCAAATCTTGAAGAAGTTAAGGTAACAGGAACCTCAATCAATGCTGTGTTTGGATTTGAC
GGCATCACATTCCAAGGTGGACAATTAAGGAAGTTGAACAGATTGACACTGCAGAATCTT
TCTCAACTAACTAGCCTATGGAAGGGTCCTAGTGAATTAGTTATGTTCCACAGGCTAGAA
GTTGTTAAAGTTTCACAATGTGAAAACCTCAGGTATATCTTCCCTTACGCCGTTTCTGAT
TACCTTTGTCATTTACAAGTACTATGGCTAGAAGATTGCAGTGGTTTGGAGAAAGTGATA
GGTGGTCACACAGATGAAGTACCAGAAAGCATAACTCTCCCAAGACTAACTACTTTGAGG
CTTCAACGTCTACCACATCTCACAGATTTCTACACTCAAGAGGCATATTTACGTTGCCCT
GAATTGCAAAGACTGCATAAACAGGATTGCAAAAGATTGAGAACTAACCTCTCTGATTAC
CATAGTGATCAGGAAATCCAAGAAAAGAGCAGCTGA