Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018993
CDS Infomation

pacid=37467270 polypeptide=PGSC0003DMP400013032 locus=PGSC0003DMG400007358 ID=PGSC0003DMT400018993.v4.03 annot-version=v4.03
Sequence

ATGAGCAGATCAGTATTTAAATTGGACGAGTTAGGCCGCGAGATTGCAAGAATCGCGCTC
CCTGCTGCACTAGCTTTAACAGCAGATCCTATTGCATCTCTGGTTGATACAGCATTCATT
GGCCAAATAGGTCCTGTTGAGCTTGCTGCTGTGGGAATTTCGATTGCTGTTTTCAATCAA
GCATCAAGGATTGCAATTTTTCCGCTTGTCAGTGTCACTACCTCTTTTGTTGCTGAGGAG
GATGCCATCACAAAAGTAAGTCCCGAACCACGAGACAACGAAAGCCAGGATATACAATCA
CAAGATGTTGAAGGATTGGATACAGAGTCGCAATCGAACAGTGAAAACAAAGAGCTAATA
CCTCAAAACAGGAGTGTGTACAAGTCCAAAACGACAGCTACATCCTTTGAAGTTGTGAAG
CCAAAGCCTGAAAAGAAGCACATTCCATCTGCATCGTCTGCATTGATCATCGGTGCCATC
CTTGGCTTCATCCAAGCCGTCTTTCTAATTTCCGGAGCAAAGCCTATATTGAGCTTCATG
GGAGTCAAACATGGATCACCCATGCTAAAACCAGCTCAAGAGTACCTAAAATTGAGGTCA
CTCGGTGCACCGGCAGTTCTTCTCTCATTAGCCATGCAAGGAGTTTTTCGAGGATTTAAA
GATACGAAAACTCCACTCTTTGCAACTGTGGCTGGAGATTTGACAAACATAATTTTGGAC
CCCATATTCATTTTTGCGTTCCATATGGGCGTCAGAGGTGCTGCAATTGCTCATGTAATT
TCACAGTACCTAATTTCAGTAATACTGTTTTGGAGATTGATGGAAAAAGTTGATCTCTTA
CCTCCTAGTCTAAAGTATATGCAATTTGCTCGATTTCTCACAAATGGATTTCTATTGTTA
ATGAGGGTTATAGCAGTGACGTTCTGTGTAACGTTAGCTGCATCATTAGCTGCAAGGTTA
GGACCCACAGAAATGGCTGCATTTCAGGTTTGCTTGCAGGTTTGGTTGACTACATCTCTT
TTAGCTGATGGTTTGGCCGTTGCTGGTCAGGTGATATATGATCTTCCTATCATTTCAACT
GTTGTAGTGAGCCTTTCTGTTCTTGCTTGTCTGTCTACTATCCGACCAGGGTTGTCTTTT
CGCTTTGACTCACCAGTGGCGGCTCAAGCTAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400013032
PEP Infomation

pacid=37467270 transcript=PGSC0003DMT400018993 locus=PGSC0003DMG400007358 ID=PGSC0003DMT400018993.v4.03 annot-version=v4.03
Sequence

MSRSVFKLDELGREIARIALPAALALTADPIASLVDTAFIGQIGPVELAAVGISIAVFNQ
ASRIAIFPLVSVTTSFVAEEDAITKVSPEPRDNESQDIQSQDVEGLDTESQSNSENKELI
PQNRSVYKSKTTATSFEVVKPKPEKKHIPSASSALIIGAILGFIQAVFLISGAKPILSFM
GVKHGSPMLKPAQEYLKLRSLGAPAVLLSLAMQGVFRGFKDTKTPLFATVAGDLTNIILD
PIFIFAFHMGVRGAAIAHVISQYLISVILFWRLMEKVDLLPPSLKYMQFARFLTNGFLLL
MRVIAVTFCVTLAASLAARLGPTEMAAFQVCLQVWLTTSLLADGLAVAGQVIYDLPIIST
VVVSLSVLACLSTIRPGLSFRFDSPVAAQAN*

Transcript Sequence

Transcript ID

PGSC0003DMT400018993
Transcript Infomation

pacid=37467270 locus=PGSC0003DMG400007358 ID=PGSC0003DMT400018993.v4.03 annot-version=v4.03
Sequence

ATGAGCAGATCAGTATTTAAATTGGACGAGTTAGGCCGCGAGATTGCAAGAATCGCGCTC
CCTGCTGCACTAGCTTTAACAGCAGATCCTATTGCATCTCTGGTTGATACAGCATTCATT
GGCCAAATAGGTCCTGTTGAGCTTGCTGCTGTGGGAATTTCGATTGCTGTTTTCAATCAA
GCATCAAGGATTGCAATTTTTCCGCTTGTCAGTGTCACTACCTCTTTTGTTGCTGAGGAG
GATGCCATCACAAAAGTAAGTCCCGAACCACGAGACAACGAAAGCCAGGATATACAATCA
CAAGATGTTGAAGGATTGGATACAGAGTCGCAATCGAACAGTGAAAACAAAGAGCTAATA
CCTCAAAACAGGAGTGTGTACAAGTCCAAAACGACAGCTACATCCTTTGAAGTTGTGAAG
CCAAAGCCTGAAAAGAAGCACATTCCATCTGCATCGTCTGCATTGATCATCGGTGCCATC
CTTGGCTTCATCCAAGCCGTCTTTCTAATTTCCGGAGCAAAGCCTATATTGAGCTTCATG
GGAGTCAAACATGGATCACCCATGCTAAAACCAGCTCAAGAGTACCTAAAATTGAGGTCA
CTCGGTGCACCGGCAGTTCTTCTCTCATTAGCCATGCAAGGAGTTTTTCGAGGATTTAAA
GATACGAAAACTCCACTCTTTGCAACTGTGGCTGGAGATTTGACAAACATAATTTTGGAC
CCCATATTCATTTTTGCGTTCCATATGGGCGTCAGAGGTGCTGCAATTGCTCATGTAATT
TCACAGTACCTAATTTCAGTAATACTGTTTTGGAGATTGATGGAAAAAGTTGATCTCTTA
CCTCCTAGTCTAAAGTATATGCAATTTGCTCGATTTCTCACAAATGGATTTCTATTGTTA
ATGAGGGTTATAGCAGTGACGTTCTGTGTAACGTTAGCTGCATCATTAGCTGCAAGGTTA
GGACCCACAGAAATGGCTGCATTTCAGGTTTGCTTGCAGGTTTGGTTGACTACATCTCTT
TTAGCTGATGGTTTGGCCGTTGCTGGTCAGGTGATATATGATCTTCCTATCATTTCAACT
GTTGTAGTGAGCCTTTCTGTTCTTGCTTGTCTGTCTACTATCCGACCAGGGTTGTCTTTT
CGCTTTGACTCACCAGTGGCGGCTCAAGCTAATTAG