Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018940
CDS Infomation

pacid=37465918 polypeptide=PGSC0003DMP400013002 locus=PGSC0003DMG400007344 ID=PGSC0003DMT400018940.v4.03 annot-version=v4.03
Sequence

ATGGATATCGGCTTAGCAGTTGGTGGTGCATTTCTCTCTTCAGCTTTGAATGTTCTCTTT
GATAGGCTTACTCCTCAGGGTGATCTGCTCAACATGTTTCAGAAACATACGAATGATGTT
CGGCTCTTAAAGAAGCTGAGAATGACTTTGCTTGGTCTTCAAACTGTGTTAAGTGATGCA
GAGAATAAGCAAGCATCAAATCAATTTGTGAGCCAGTGGCTTAATGAGCTTCGAGATGCT
GTGGACTCTGCTGAAAATTTGATGGAACAAGTCAATTATGAGGTTTTGAGACTTCAGGTG
TCTAGCAACCAGCAAGTAAGTGACCTCAACCTGTGCTTGAGTGATGATTTCTTTCTTAAC
ATAAAGGAGAAGTTGGAAGACACTATTGAAACATTGAAGGATTTGCAAGAGCAAATTGGT
CTACTTGGCTTAAAGGAACATTTTGGTTCGACTAAACGAGAAACTAGAACACCTTCAACT
TCTTTGGTTGACGATTCTGATATCTTTGGAAGGCAGAATGATATAGAGAATTTGATTGAC
CATTTATTGTCTGAAGATGTAAATGGAAATTTTTTGACTGTAGTTCCTATTGTTGGAATG
GGAGGTGTGGGTAAGACAACACTTGCTAAAGCGGTTTACAATGATGAGAAGGTGAAAAAC
CATTTTGGTTTGAAAGCTTGGTTTTGTGTTTCTGAGGCATATGATGCTTTCAGAATAACG
AAAGGGTTACTTCAAGAAATTGGCTCATTTGACTTAAAGGTTGGTGACAATCTTAATCAG
CTACAGGCCAAATTGAAGGAAAGCCTGAAGGGAAAGAAGTTTCTTGTTGTCCTTGATGAT
GTGTGGAATGATAACTATAATGAGTGGGATGACCTGAGAAATCTTTTTGTACAAGGAGAT
ATGGGAAGTAAGATCATTGTAACTACACGTAAGGAGAATGTTGCCTCGATGATGGGTAGC
AGAGCAATCAACGTGGGAACTCTGTCTAGTGAAGTCTCTTGGGATTTATTCAAACGACAT
TCACTAGAAAATAGGGATCCTGAGGAACACCCAAAATTTGAAGAGGTTGGAAGAAAAATT
GCAGACAAGTGCAAAGGGGTGCCTTTAGCTCTAAAGACACTTGCTGGTATTTTGCGCTGC
AAATCAGAGGTGGAAGAGTGGAGAGACATTTTAAGTAGGAAAATATGGGACCAACCAAGT
TGTTTGAATGGTATATTACCAGCGTTGATGCTGAGCTACAATGATCTTCCTCCAGATTTG
AAGCGATGTTTTGCTTATTGTGCAATATATCCAAAAGATTATCTATTTTGCAAAGACCAA
GTTATATACTTGTGGATTGCTAATGGTCTTGTACAGCAGTTTCATTCAGGTAACCAATAC
TTTTGTGAGTTGAGATCAAGATCATTGTTCGAAAGGGTCCCAGAGTCTGAAGGGAAACCG
GAGGGATTCTTAATGCATGACCTAGTCAATGATTTGGCCCGAATTGCATCTTCAAAACTT
TGTATTAGGTTGGAAGAGAACAAAGGATCTCATATGTTGGAACAAAGTCGGCACATGTCC
TATTCCATGGGAGAAGGTGATGACTTTGAACAGTTGAAGCCCCTCTACAAATTGCAGCAG
TTGAGGACATTGCTTCTAATCGATACTGATTACTCACCTCCGCTAACCAAGAGGGTGTTG
CATAACATATTGCCAAGACTAACATCCTTAAGGTCATTATCGTTGTCAAATAGTTGGATT
GTGGAGTTGCCAGATGTGTTGTTTATCAAATTAAAGCTTCTCAGATTCTTGGACCTTTCT
AGGGTGCTGATTGAAAAGTTGCCAGATTCCATTTGTGTATTGTATAACTTGGAGACACTT
CTACTGTCACATTGTAGTAATCTTAAGGAGTTACCGCTGCAGATGGAAAAGCTAATCAAC
TTACGCCATCTTGACGTAAGCAACACTTTTAGCTTGAAGATGCTGCTACATCTAAGCAAG
TTGAAAAGCCTCCAAGTGCTAGTGGGAGCTAAGCTTCTTCTAGGTGGTCATGGTGGATTG
AGAATGGAAGATTTGGGTGAACTGCATAACTTGTATGGATCTCTATCAATTCTAGAGTTG
CAAAATGTGGTTGATAGAAGGGAAGCTCTAAAGGCAAACTTTTGGGAGAAGAATCATGTT
GACAAATTATCATTGGAGTGGAGTGAAAGTACCGCCGACAATTCACAAACTGAAAGAGAC
ATACTTGATGAGCTATGTCCACACACAAACATAAAAGAACTCCAAATCACCGGATATAGA
GGGACAAAATTTCCAAATTGGCCACCTAGTCTTTCGTTTCTTGAGCTGGTTAAATTGTCT
ATTGATTCCTTGCCAGCACTAGGACAACTCCCTTCTTTGAAATTCCTTTTCATTAGAAGG
ATGCATCGAATAACAGAGGTTACAGAAGAATTCTATGGAAGTTCGTCATCTGGAAAACAT
TTTAACTCTCTTGAGAAGCTTGAATTTGAAGATATGCCAGAGTGGAAGCAATGGCACGTA
CTAGGAAGTGGCGAGTTCCCTATACTTGAGAATCTTTCAATTGAAAATTGTCCGAAGTTG
ATAGGGAAGTTGCCTGAAAATCTTTGTTCTCTGACAGAATTGAGCATTTCAAGATGTCCT
GAACTCAATTTAGAGACACCTCTTTTTAACGAGGCTGAACTGTTTACATCCCAACTTAAG
GGAATGAAGCACATTGTTGATTTATATATTGTTGGTTGTAACTCTCTTACCTCCTTACCT
TTTAGCATACTGCCGAGTACCTTGAAGACAATAACCATATCTCGTTGCCAGAAATTGAAA
TTGGATCCACCAGTCGGTGAGATAAGTTATTGTAACATGTTTCTCGAGAGATTGAAACTG
CATGAATGTGTTTCTATAGATGATATATCACCTGAGTTGGTCCCAAGAGCATGCAAATTG
AATATATCTAGTTGCCATAACATAACTAGCTTTTCGATTCCTACTGTGACTGAGAGACTC
TTCATTTTTGGATGTCACAACCTTTCGGTTGCATGTGGGGGCAGCCAGATGACGTACTTG
GGTATCGTCTACTGTGAGAAGCTGAAGTGGCTGCCAGAACGTATGCAGGAACTCCTTCCA
TCTCTTAAGGAACTGGAACTGTTGGATTGTCCAGAAATAGAGTCCTTTCCTGAAGGAGGA
ATGCCATTCAATTTACAACAACTTCGAATTGGGAATTGCAAGAAACTGGTGAACAGCCGA
AAAGAGTGGAGTTTACATAGACTCCCCTGTCTCAGAAAGTTAGTGATCGAACATGATGGC
AGTGACGAAGAGATCGAACATTGGGAGTTGCCTTGCTCTATTCAAAGATTTGAGGTATCC
AATCTGAAAACATTAAGCACCCAACTTCTCAAAAGCCTCACCTCTCTTGAAGATCTACGT
ATTGGTAATTTACCTCAAATTCAGTCAATGCTGGAAGAAGGGCTTCCCTCCTCTCTTTCT
CACCTCACTTCACTTCAAAGCCTAAGCATCTTCTCCTGCCATCAACTCCAGTCTCTTTCC
CTTCCCTCCTCCCTCTCCAAGCTGAACATCGAGAATTGTCCTAATCTCCAATCACTTTCC
GAATCAGCACTGCCTTCCTCCCTCTATGAGCTGACCATCGCGCATTGCGCTAATCTCCAA
TCCCTTCCAGCAAAAGGAATGCTCTCTTCCCTCTCTAAACTAGATATTTCCAACTGTCCA
TTCCTCAAACCACTCCTAGAATTTGACAAGGGGGAATACTGGCCAGAAATTGCTCATATC
TCCATCATAGAAATCGATGAGGAATACCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400013002
PEP Infomation

pacid=37465918 transcript=PGSC0003DMT400018940 locus=PGSC0003DMG400007344 ID=PGSC0003DMT400018940.v4.03 annot-version=v4.03
Sequence

MDIGLAVGGAFLSSALNVLFDRLTPQGDLLNMFQKHTNDVRLLKKLRMTLLGLQTVLSDA
ENKQASNQFVSQWLNELRDAVDSAENLMEQVNYEVLRLQVSSNQQVSDLNLCLSDDFFLN
IKEKLEDTIETLKDLQEQIGLLGLKEHFGSTKRETRTPSTSLVDDSDIFGRQNDIENLID
HLLSEDVNGNFLTVVPIVGMGGVGKTTLAKAVYNDEKVKNHFGLKAWFCVSEAYDAFRIT
KGLLQEIGSFDLKVGDNLNQLQAKLKESLKGKKFLVVLDDVWNDNYNEWDDLRNLFVQGD
MGSKIIVTTRKENVASMMGSRAINVGTLSSEVSWDLFKRHSLENRDPEEHPKFEEVGRKI
ADKCKGVPLALKTLAGILRCKSEVEEWRDILSRKIWDQPSCLNGILPALMLSYNDLPPDL
KRCFAYCAIYPKDYLFCKDQVIYLWIANGLVQQFHSGNQYFCELRSRSLFERVPESEGKP
EGFLMHDLVNDLARIASSKLCIRLEENKGSHMLEQSRHMSYSMGEGDDFEQLKPLYKLQQ
LRTLLLIDTDYSPPLTKRVLHNILPRLTSLRSLSLSNSWIVELPDVLFIKLKLLRFLDLS
RVLIEKLPDSICVLYNLETLLLSHCSNLKELPLQMEKLINLRHLDVSNTFSLKMLLHLSK
LKSLQVLVGAKLLLGGHGGLRMEDLGELHNLYGSLSILELQNVVDRREALKANFWEKNHV
DKLSLEWSESTADNSQTERDILDELCPHTNIKELQITGYRGTKFPNWPPSLSFLELVKLS
IDSLPALGQLPSLKFLFIRRMHRITEVTEEFYGSSSSGKHFNSLEKLEFEDMPEWKQWHV
LGSGEFPILENLSIENCPKLIGKLPENLCSLTELSISRCPELNLETPLFNEAELFTSQLK
GMKHIVDLYIVGCNSLTSLPFSILPSTLKTITISRCQKLKLDPPVGEISYCNMFLERLKL
HECVSIDDISPELVPRACKLNISSCHNITSFSIPTVTERLFIFGCHNLSVACGGSQMTYL
GIVYCEKLKWLPERMQELLPSLKELELLDCPEIESFPEGGMPFNLQQLRIGNCKKLVNSR
KEWSLHRLPCLRKLVIEHDGSDEEIEHWELPCSIQRFEVSNLKTLSTQLLKSLTSLEDLR
IGNLPQIQSMLEEGLPSSLSHLTSLQSLSIFSCHQLQSLSLPSSLSKLNIENCPNLQSLS
ESALPSSLYELTIAHCANLQSLPAKGMLSSLSKLDISNCPFLKPLLEFDKGEYWPEIAHI
SIIEIDEEYL*

Transcript Sequence

Transcript ID

PGSC0003DMT400018940
Transcript Infomation

pacid=37465918 locus=PGSC0003DMG400007344 ID=PGSC0003DMT400018940.v4.03 annot-version=v4.03
Sequence

ATGGATATCGGCTTAGCAGTTGGTGGTGCATTTCTCTCTTCAGCTTTGAATGTTCTCTTT
GATAGGCTTACTCCTCAGGGTGATCTGCTCAACATGTTTCAGAAACATACGAATGATGTT
CGGCTCTTAAAGAAGCTGAGAATGACTTTGCTTGGTCTTCAAACTGTGTTAAGTGATGCA
GAGAATAAGCAAGCATCAAATCAATTTGTGAGCCAGTGGCTTAATGAGCTTCGAGATGCT
GTGGACTCTGCTGAAAATTTGATGGAACAAGTCAATTATGAGGTTTTGAGACTTCAGGTG
TCTAGCAACCAGCAAGTAAGTGACCTCAACCTGTGCTTGAGTGATGATTTCTTTCTTAAC
ATAAAGGAGAAGTTGGAAGACACTATTGAAACATTGAAGGATTTGCAAGAGCAAATTGGT
CTACTTGGCTTAAAGGAACATTTTGGTTCGACTAAACGAGAAACTAGAACACCTTCAACT
TCTTTGGTTGACGATTCTGATATCTTTGGAAGGCAGAATGATATAGAGAATTTGATTGAC
CATTTATTGTCTGAAGATGTAAATGGAAATTTTTTGACTGTAGTTCCTATTGTTGGAATG
GGAGGTGTGGGTAAGACAACACTTGCTAAAGCGGTTTACAATGATGAGAAGGTGAAAAAC
CATTTTGGTTTGAAAGCTTGGTTTTGTGTTTCTGAGGCATATGATGCTTTCAGAATAACG
AAAGGGTTACTTCAAGAAATTGGCTCATTTGACTTAAAGGTTGGTGACAATCTTAATCAG
CTACAGGCCAAATTGAAGGAAAGCCTGAAGGGAAAGAAGTTTCTTGTTGTCCTTGATGAT
GTGTGGAATGATAACTATAATGAGTGGGATGACCTGAGAAATCTTTTTGTACAAGGAGAT
ATGGGAAGTAAGATCATTGTAACTACACGTAAGGAGAATGTTGCCTCGATGATGGGTAGC
AGAGCAATCAACGTGGGAACTCTGTCTAGTGAAGTCTCTTGGGATTTATTCAAACGACAT
TCACTAGAAAATAGGGATCCTGAGGAACACCCAAAATTTGAAGAGGTTGGAAGAAAAATT
GCAGACAAGTGCAAAGGGGTGCCTTTAGCTCTAAAGACACTTGCTGGTATTTTGCGCTGC
AAATCAGAGGTGGAAGAGTGGAGAGACATTTTAAGTAGGAAAATATGGGACCAACCAAGT
TGTTTGAATGGTATATTACCAGCGTTGATGCTGAGCTACAATGATCTTCCTCCAGATTTG
AAGCGATGTTTTGCTTATTGTGCAATATATCCAAAAGATTATCTATTTTGCAAAGACCAA
GTTATATACTTGTGGATTGCTAATGGTCTTGTACAGCAGTTTCATTCAGGTAACCAATAC
TTTTGTGAGTTGAGATCAAGATCATTGTTCGAAAGGGTCCCAGAGTCTGAAGGGAAACCG
GAGGGATTCTTAATGCATGACCTAGTCAATGATTTGGCCCGAATTGCATCTTCAAAACTT
TGTATTAGGTTGGAAGAGAACAAAGGATCTCATATGTTGGAACAAAGTCGGCACATGTCC
TATTCCATGGGAGAAGGTGATGACTTTGAACAGTTGAAGCCCCTCTACAAATTGCAGCAG
TTGAGGACATTGCTTCTAATCGATACTGATTACTCACCTCCGCTAACCAAGAGGGTGTTG
CATAACATATTGCCAAGACTAACATCCTTAAGGTCATTATCGTTGTCAAATAGTTGGATT
GTGGAGTTGCCAGATGTGTTGTTTATCAAATTAAAGCTTCTCAGATTCTTGGACCTTTCT
AGGGTGCTGATTGAAAAGTTGCCAGATTCCATTTGTGTATTGTATAACTTGGAGACACTT
CTACTGTCACATTGTAGTAATCTTAAGGAGTTACCGCTGCAGATGGAAAAGCTAATCAAC
TTACGCCATCTTGACGTAAGCAACACTTTTAGCTTGAAGATGCTGCTACATCTAAGCAAG
TTGAAAAGCCTCCAAGTGCTAGTGGGAGCTAAGCTTCTTCTAGGTGGTCATGGTGGATTG
AGAATGGAAGATTTGGGTGAACTGCATAACTTGTATGGATCTCTATCAATTCTAGAGTTG
CAAAATGTGGTTGATAGAAGGGAAGCTCTAAAGGCAAACTTTTGGGAGAAGAATCATGTT
GACAAATTATCATTGGAGTGGAGTGAAAGTACCGCCGACAATTCACAAACTGAAAGAGAC
ATACTTGATGAGCTATGTCCACACACAAACATAAAAGAACTCCAAATCACCGGATATAGA
GGGACAAAATTTCCAAATTGGCCACCTAGTCTTTCGTTTCTTGAGCTGGTTAAATTGTCT
ATTGATTCCTTGCCAGCACTAGGACAACTCCCTTCTTTGAAATTCCTTTTCATTAGAAGG
ATGCATCGAATAACAGAGGTTACAGAAGAATTCTATGGAAGTTCGTCATCTGGAAAACAT
TTTAACTCTCTTGAGAAGCTTGAATTTGAAGATATGCCAGAGTGGAAGCAATGGCACGTA
CTAGGAAGTGGCGAGTTCCCTATACTTGAGAATCTTTCAATTGAAAATTGTCCGAAGTTG
ATAGGGAAGTTGCCTGAAAATCTTTGTTCTCTGACAGAATTGAGCATTTCAAGATGTCCT
GAACTCAATTTAGAGACACCTCTTTTTAACGAGGCTGAACTGTTTACATCCCAACTTAAG
GGAATGAAGCACATTGTTGATTTATATATTGTTGGTTGTAACTCTCTTACCTCCTTACCT
TTTAGCATACTGCCGAGTACCTTGAAGACAATAACCATATCTCGTTGCCAGAAATTGAAA
TTGGATCCACCAGTCGGTGAGATAAGTTATTGTAACATGTTTCTCGAGAGATTGAAACTG
CATGAATGTGTTTCTATAGATGATATATCACCTGAGTTGGTCCCAAGAGCATGCAAATTG
AATATATCTAGTTGCCATAACATAACTAGCTTTTCGATTCCTACTGTGACTGAGAGACTC
TTCATTTTTGGATGTCACAACCTTTCGGTTGCATGTGGGGGCAGCCAGATGACGTACTTG
GGTATCGTCTACTGTGAGAAGCTGAAGTGGCTGCCAGAACGTATGCAGGAACTCCTTCCA
TCTCTTAAGGAACTGGAACTGTTGGATTGTCCAGAAATAGAGTCCTTTCCTGAAGGAGGA
ATGCCATTCAATTTACAACAACTTCGAATTGGGAATTGCAAGAAACTGGTGAACAGCCGA
AAAGAGTGGAGTTTACATAGACTCCCCTGTCTCAGAAAGTTAGTGATCGAACATGATGGC
AGTGACGAAGAGATCGAACATTGGGAGTTGCCTTGCTCTATTCAAAGATTTGAGGTATCC
AATCTGAAAACATTAAGCACCCAACTTCTCAAAAGCCTCACCTCTCTTGAAGATCTACGT
ATTGGTAATTTACCTCAAATTCAGTCAATGCTGGAAGAAGGGCTTCCCTCCTCTCTTTCT
CACCTCACTTCACTTCAAAGCCTAAGCATCTTCTCCTGCCATCAACTCCAGTCTCTTTCC
CTTCCCTCCTCCCTCTCCAAGCTGAACATCGAGAATTGTCCTAATCTCCAATCACTTTCC
GAATCAGCACTGCCTTCCTCCCTCTATGAGCTGACCATCGCGCATTGCGCTAATCTCCAA
TCCCTTCCAGCAAAAGGAATGCTCTCTTCCCTCTCTAAACTAGATATTTCCAACTGTCCA
TTCCTCAAACCACTCCTAGAATTTGACAAGGGGGAATACTGGCCAGAAATTGCTCATATC
TCCATCATAGAAATCGATGAGGAATACCTTTAA