Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018912
CDS Infomation

pacid=37424522 polypeptide=PGSC0003DMP400012985 locus=PGSC0003DMG401007333 ID=PGSC0003DMT400018912.v4.03 annot-version=v4.03
Sequence

ATGGTTTCTTCCACCATTCTAATTCAGCAACCGACGAACTTCTTCCACCAGCCAGAGTTT
CACCATCAGTTATGGAGAGGTCTGCACCATGGATGTGCTGCATCATTGCAGAAACATCCT
ATTTTTGTATGTAATAGTAGCAAGAGAAACAGACCTTCGAGAGTTTCTTCAATTGCTAAT
GGTGCTGTTACTTCTTCCACTTTGGAGGCTTATGATTCTTCTCCGTCTCCTTCTGCATTT
CCTCTTTTTACACTCCCTTCTCAACCCCAAGATACTCCTGCTTCTCAGTTGGAACTGGCA
GATCCTGATTTCTACAAAATAGGATATGTTAGAAGTTTTCGAGCCTACGGAATTGAATTC
AGGGAGGGACCAGATGGGTATGGAGTGTTTGCTTCCAAAGACGTGGAGCCTCTCCGTCGA
GCTAGGGTTATAATGGAAATTCCTTTAGAACTTATGTTAACCATAAGCAAAAAGCTTCCT
TGGATGTTTTTTCCAGATATTATACCTGTAGGACATCCAATATTCGACATTATCAATTCA
ACCAATCCTGAGACAGATTCGGACTTGAGGTTGGCATGCCTTCTTTTATATGCTTTTGAT
TGCAAGGACAACTTTTGGCAGCTTTACGGAGACTTCTTGCCTAGTGCTGATGAATGCACT
AGCTTTCTTCTAGCTACTGAGGAGGATCTTTTGGAGTTGCAAGACGAGAAGCTTGCTTCA
ACCATGAGAGAACAGCAACACCGGGCACTTGAGTTTTGGGAGAGAAACTGGCATTCTGCA
GTACCTCTCAAAATTAAGCGTCTTGCTCAGGATCCTGAGAGATTTATTTGGGCAATGAGT
ATAGCACAATCTCGATGCATCAACTTGCAAACGAGAATTGGTTCACTGGTTCAAGATGCA
AATATGTTGGTACCTTATGCTGACATGATGAATCATTCTTTTCAGCCAAATTGCTTTTTC
CATTGGCGCTTCAAGGACCGCATGCTGGAGGTGATGATAAATGCGGGACAAAAAATTAGA
AAAGGAGAAGAGATGACTGTTGATTACATGGCTGGACAGAAGAATGACTTGTTTATGCAG
AGATATGGTTTCTCATCGCCTGTGAATCCTTGGGATGTCATTCATTTCACCGGAGATGCC
AAAATTCATCTAGACACCTTTTTATCGGTCTTTAACATATCTGGCCTCCCTGGAGAATAT
TACCACAACAGTAAACTATCAAATGATGGAGACAGGTTCGTCGATGGAGCAATAATAGCA
GCTGCAAGAACATTGCCCACTTGGTCAGATGGAGATCTCCCTCCAATTCCAAGTTTAGAG
AGGAAAGCAGTGAAGGAGCTGCAAGAAGAATGCCACCAGATGCTTGCAGAATTTCCCACA
ACTTCTGACGAAGACCAGAAAATCCTAGATTTGATGCCTGAATGCAGGAGAACACTCGAA
GCAGCAATAAAGTATAGATTACATCGGAAATTACTGATAGAGAAGGTTATACAGGCCTTG
GACATTTACCAAGACAGGATTCTGTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012985
PEP Infomation

pacid=37424522 transcript=PGSC0003DMT400018912 locus=PGSC0003DMG401007333 ID=PGSC0003DMT400018912.v4.03 annot-version=v4.03
Sequence

MVSSTILIQQPTNFFHQPEFHHQLWRGLHHGCAASLQKHPIFVCNSSKRNRPSRVSSIAN
GAVTSSTLEAYDSSPSPSAFPLFTLPSQPQDTPASQLELADPDFYKIGYVRSFRAYGIEF
REGPDGYGVFASKDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPVGHPIFDIINS
TNPETDSDLRLACLLLYAFDCKDNFWQLYGDFLPSADECTSFLLATEEDLLELQDEKLAS
TMREQQHRALEFWERNWHSAVPLKIKRLAQDPERFIWAMSIAQSRCINLQTRIGSLVQDA
NMLVPYADMMNHSFQPNCFFHWRFKDRMLEVMINAGQKIRKGEEMTVDYMAGQKNDLFMQ
RYGFSSPVNPWDVIHFTGDAKIHLDTFLSVFNISGLPGEYYHNSKLSNDGDRFVDGAIIA
AARTLPTWSDGDLPPIPSLERKAVKELQEECHQMLAEFPTTSDEDQKILDLMPECRRTLE
AAIKYRLHRKLLIEKVIQALDIYQDRILF*

Transcript Sequence

Transcript ID

PGSC0003DMT400018912
Transcript Infomation

pacid=37424522 locus=PGSC0003DMG401007333 ID=PGSC0003DMT400018912.v4.03 annot-version=v4.03
Sequence

ATGGTTTCTTCCACCATTCTAATTCAGCAACCGACGAACTTCTTCCACCAGCCAGAGTTT
CACCATCAGTTATGGAGAGGTCTGCACCATGGATGTGCTGCATCATTGCAGAAACATCCT
ATTTTTGTATGTAATAGTAGCAAGAGAAACAGACCTTCGAGAGTTTCTTCAATTGCTAAT
GGTGCTGTTACTTCTTCCACTTTGGAGGCTTATGATTCTTCTCCGTCTCCTTCTGCATTT
CCTCTTTTTACACTCCCTTCTCAACCCCAAGATACTCCTGCTTCTCAGTTGGAACTGGCA
GATCCTGATTTCTACAAAATAGGATATGTTAGAAGTTTTCGAGCCTACGGAATTGAATTC
AGGGAGGGACCAGATGGGTATGGAGTGTTTGCTTCCAAAGACGTGGAGCCTCTCCGTCGA
GCTAGGGTTATAATGGAAATTCCTTTAGAACTTATGTTAACCATAAGCAAAAAGCTTCCT
TGGATGTTTTTTCCAGATATTATACCTGTAGGACATCCAATATTCGACATTATCAATTCA
ACCAATCCTGAGACAGATTCGGACTTGAGGTTGGCATGCCTTCTTTTATATGCTTTTGAT
TGCAAGGACAACTTTTGGCAGCTTTACGGAGACTTCTTGCCTAGTGCTGATGAATGCACT
AGCTTTCTTCTAGCTACTGAGGAGGATCTTTTGGAGTTGCAAGACGAGAAGCTTGCTTCA
ACCATGAGAGAACAGCAACACCGGGCACTTGAGTTTTGGGAGAGAAACTGGCATTCTGCA
GTACCTCTCAAAATTAAGCGTCTTGCTCAGGATCCTGAGAGATTTATTTGGGCAATGAGT
ATAGCACAATCTCGATGCATCAACTTGCAAACGAGAATTGGTTCACTGGTTCAAGATGCA
AATATGTTGGTACCTTATGCTGACATGATGAATCATTCTTTTCAGCCAAATTGCTTTTTC
CATTGGCGCTTCAAGGACCGCATGCTGGAGGTGATGATAAATGCGGGACAAAAAATTAGA
AAAGGAGAAGAGATGACTGTTGATTACATGGCTGGACAGAAGAATGACTTGTTTATGCAG
AGATATGGTTTCTCATCGCCTGTGAATCCTTGGGATGTCATTCATTTCACCGGAGATGCC
AAAATTCATCTAGACACCTTTTTATCGGTCTTTAACATATCTGGCCTCCCTGGAGAATAT
TACCACAACAGTAAACTATCAAATGATGGAGACAGGTTCGTCGATGGAGCAATAATAGCA
GCTGCAAGAACATTGCCCACTTGGTCAGATGGAGATCTCCCTCCAATTCCAAGTTTAGAG
AGGAAAGCAGTGAAGGAGCTGCAAGAAGAATGCCACCAGATGCTTGCAGAATTTCCCACA
ACTTCTGACGAAGACCAGAAAATCCTAGATTTGATGCCTGAATGCAGGAGAACACTCGAA
GCAGCAATAAAGTATAGATTACATCGGAAATTACTGATAGAGAAGGTTATACAGGCCTTG
GACATTTACCAAGACAGGATTCTGTTCTAA