Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018892
CDS Infomation

pacid=37424822 polypeptide=PGSC0003DMP400012967 locus=PGSC0003DMG400007322 ID=PGSC0003DMT400018892.v4.03 annot-version=v4.03
Sequence

ATGTTAGGCATTACACCAATATTGCCCCTTCCGGCACCCCCGTTGGATGGGAATCTGGGA
CCAACACCTCTAGCTCAGGTGGTAGAGGAACCAAATGATGTTAAGATGGAAGAGAATGAA
GAGGAAAACAATAAGGACAAGGTTCCAACATCTGTTGCAACACATACGAGAACTATTGGT
ATTATTTATCCCCCTCCAGATATTAGGAGTATTGTTGACAAGACTTCGCAGTTTGTGGCA
AAGAATGGTCCGGAATTTGAGAAGAGGATTGTTCTAAATAACGCTGGCAATGCAAAATTC
AACTTCCTGAATGCTTCTGATCCTTACCATGCCTATTATCAGCACCGTTTGGCTGAAGCT
CGCGCACATAATCAGGGTTCTGGAGAGCAGCCAGAAGACAAAGAAGGAACCCCTGCTCCT
TCTACCGCTGATGGTGCTGAGGCAACTGCAAAACCTGACCCGTCAGCTCAATTTAGACCT
GTCAGAAAGGTTCTTGAGCCACCTGAGGCAGAGCAATATACTGTTCGACTCCCTGAAGGG
ATCACAGGTGAAGAAATGGATATCATAAAGCTTACATCACAATTTGTGGCCAGAAATGGG
AAGTCTTTCTTAACAGGGTTGACAAGCAGAGAGATGAATAATCCCCAATTTCATTTTCTA
AAGCCTACTCACAGCATGTTCATGTTTTTCACTTCACTTGCGGATGCGTATTCAAAAGTT
CTGATGCCTCCTAAAGGCTTGACGAATAAGCTGCAGAAGAGTGCTGCTGACATGACAACA
GTCCTAGAGCGTTGTCTGCATCGGTTGGAATGGGAAAGATCACAGGAGCAGGCTAGACAG
AAAGCTGAAGATGAGATAGAACAGGAGAGGGTGCAGATGGCTATGATTGATTGGCATGAT
TTTGTTGTTGTTGAGACGATAGATTTTGCTGATGATGAGGATCAGGATTTACCTCCACCT
ATGACCCTTGAGGAGGTTATAAGGAGGAGCAAGATGCCTACATTGGAGGAAGAGGAATAT
GTTGAGCCTGGAAAGGAGGTGGAAATGGAGATGGATGAAGAAGAGGTGCAGCTAGTTGAA
GAAGGTATGCGAGCTGCGACTCTTGAAGGGAATGGTGGTGTCAAGAGTGCTGAAACAATG
GCAATTTCCGAAGAAAATGATCCACCAATGCGGATTGTGAAGAACTGGAAGAGGCCTGAA
GAGAGAATCCCGGCAGAAAGGGACCCAACTAAGTATGTTGTCTCTCCTATAACTGGTGAG
TTAATACCTATTAGTGAGATGTCTGAACATATGAGGATCTCTCTCATTGATCCGAAGTAC
AAGGAACAGAAGGACAGGATGTTTGCGAAGATTAAGGAAACGACTCTTGCGCAAGATGAT
GAGATCTCTAGGAACATTGTTGGGCTTGCACGAACTCGTCCAGATATATTTGGTACTACA
GAAGAAGAAGTTTCAAATGCGGTCAAGGCTGAGATTGAGAAAAAAATAGAAGAGCCGAAG
CAGGTCATATGGGATGGTCACACAGGTAGCATTGGCCGCACTGCAAGCCAGGCAATGTCT
CAGAACAATGCAGAGGATCAGAATGATGCTGCAAATGATGTAAGAAACCTTCCTGGTCCA
CAGGCTCCTCCACCTCCCAGACCCGGTCTTCCTTCTGTTAGGCCACTACCTCCACCTCCT
GGGCTTGCGCTGAATATTCCTAGGCCTCCTAATACATTCCAGTATTCCACACCAACCATT
GCTGGTGCTGCTCCGCCTCCACCTCAACCTCCTATGGTTAACATGATTCCTCAGGTTCGG
CCCCCACCTCCTCCCATGCTACAACTACAAGGTCAGCAAAACCTCATGGTCAATCGTCCC
CCAATGCCTCCATCAATGGCTATGAGTTCGCATACCCTTCCTATTCCACCACCTCCTGGA
TCACAGTTTACACCTATGGGAGCACCTCGGCCCTTTGTTCCCCACCCGATGTCCCAGCCC
GGAATGTCTATGGTCCCGCCTCCTCCTATGCCCCAAGGAATGCCGCCACCTCCTCCACCA
GAAGAAGCTCCTCCTCTCCCTGAAGAGCCGGAGCCGAAGAGGCAAAAGCTTGATGAGTCT
GTTCTCATTCCTGAAGACCAGTTTTTGGCTCAGCATTCGGGACCTGCAAGGATCAATGTA
TCTGTGCCGAATACCGATGAAGGGAATCTCAAAGGACAAGTTCTGGAAATCACTGTGCTA
TCTCTGTCTGAAACCATTGCCAGTCTGAAAGAGAAGATATCTGGGGAGATCCAGCTTCCT
GCGAACAAACAAAAGCTGAGTGGAAAGGCTGGTTTTCTCAAGGACAACTTGTCTCTTGCA
TACTATAATGTTGCTTCTGGAGAAACATTCAGTCTCTCTCTGAGAGAACGTGGTGGGAGA
AAGAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400012967
PEP Infomation

pacid=37424822 transcript=PGSC0003DMT400018892 locus=PGSC0003DMG400007322 ID=PGSC0003DMT400018892.v4.03 annot-version=v4.03
Sequence

MLGITPILPLPAPPLDGNLGPTPLAQVVEEPNDVKMEENEEENNKDKVPTSVATHTRTIG
IIYPPPDIRSIVDKTSQFVAKNGPEFEKRIVLNNAGNAKFNFLNASDPYHAYYQHRLAEA
RAHNQGSGEQPEDKEGTPAPSTADGAEATAKPDPSAQFRPVRKVLEPPEAEQYTVRLPEG
ITGEEMDIIKLTSQFVARNGKSFLTGLTSREMNNPQFHFLKPTHSMFMFFTSLADAYSKV
LMPPKGLTNKLQKSAADMTTVLERCLHRLEWERSQEQARQKAEDEIEQERVQMAMIDWHD
FVVVETIDFADDEDQDLPPPMTLEEVIRRSKMPTLEEEEYVEPGKEVEMEMDEEEVQLVE
EGMRAATLEGNGGVKSAETMAISEENDPPMRIVKNWKRPEERIPAERDPTKYVVSPITGE
LIPISEMSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTRPDIFGTT
EEEVSNAVKAEIEKKIEEPKQVIWDGHTGSIGRTASQAMSQNNAEDQNDAANDVRNLPGP
QAPPPPRPGLPSVRPLPPPPGLALNIPRPPNTFQYSTPTIAGAAPPPPQPPMVNMIPQVR
PPPPPMLQLQGQQNLMVNRPPMPPSMAMSSHTLPIPPPPGSQFTPMGAPRPFVPHPMSQP
GMSMVPPPPMPQGMPPPPPPEEAPPLPEEPEPKRQKLDESVLIPEDQFLAQHSGPARINV
SVPNTDEGNLKGQVLEITVLSLSETIASLKEKISGEIQLPANKQKLSGKAGFLKDNLSLA
YYNVASGETFSLSLRERGGRKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400018892
Transcript Infomation

pacid=37424822 locus=PGSC0003DMG400007322 ID=PGSC0003DMT400018892.v4.03 annot-version=v4.03
Sequence

ATGTTAGGCATTACACCAATATTGCCCCTTCCGGCACCCCCGTTGGATGGGAATCTGGGA
CCAACACCTCTAGCTCAGGTGGTAGAGGAACCAAATGATGTTAAGATGGAAGAGAATGAA
GAGGAAAACAATAAGGACAAGGTTCCAACATCTGTTGCAACACATACGAGAACTATTGGT
ATTATTTATCCCCCTCCAGATATTAGGAGTATTGTTGACAAGACTTCGCAGTTTGTGGCA
AAGAATGGTCCGGAATTTGAGAAGAGGATTGTTCTAAATAACGCTGGCAATGCAAAATTC
AACTTCCTGAATGCTTCTGATCCTTACCATGCCTATTATCAGCACCGTTTGGCTGAAGCT
CGCGCACATAATCAGGGTTCTGGAGAGCAGCCAGAAGACAAAGAAGGAACCCCTGCTCCT
TCTACCGCTGATGGTGCTGAGGCAACTGCAAAACCTGACCCGTCAGCTCAATTTAGACCT
GTCAGAAAGGTTCTTGAGCCACCTGAGGCAGAGCAATATACTGTTCGACTCCCTGAAGGG
ATCACAGGTGAAGAAATGGATATCATAAAGCTTACATCACAATTTGTGGCCAGAAATGGG
AAGTCTTTCTTAACAGGGTTGACAAGCAGAGAGATGAATAATCCCCAATTTCATTTTCTA
AAGCCTACTCACAGCATGTTCATGTTTTTCACTTCACTTGCGGATGCGTATTCAAAAGTT
CTGATGCCTCCTAAAGGCTTGACGAATAAGCTGCAGAAGAGTGCTGCTGACATGACAACA
GTCCTAGAGCGTTGTCTGCATCGGTTGGAATGGGAAAGATCACAGGAGCAGGCTAGACAG
AAAGCTGAAGATGAGATAGAACAGGAGAGGGTGCAGATGGCTATGATTGATTGGCATGAT
TTTGTTGTTGTTGAGACGATAGATTTTGCTGATGATGAGGATCAGGATTTACCTCCACCT
ATGACCCTTGAGGAGGTTATAAGGAGGAGCAAGATGCCTACATTGGAGGAAGAGGAATAT
GTTGAGCCTGGAAAGGAGGTGGAAATGGAGATGGATGAAGAAGAGGTGCAGCTAGTTGAA
GAAGGTATGCGAGCTGCGACTCTTGAAGGGAATGGTGGTGTCAAGAGTGCTGAAACAATG
GCAATTTCCGAAGAAAATGATCCACCAATGCGGATTGTGAAGAACTGGAAGAGGCCTGAA
GAGAGAATCCCGGCAGAAAGGGACCCAACTAAGTATGTTGTCTCTCCTATAACTGGTGAG
TTAATACCTATTAGTGAGATGTCTGAACATATGAGGATCTCTCTCATTGATCCGAAGTAC
AAGGAACAGAAGGACAGGATGTTTGCGAAGATTAAGGAAACGACTCTTGCGCAAGATGAT
GAGATCTCTAGGAACATTGTTGGGCTTGCACGAACTCGTCCAGATATATTTGGTACTACA
GAAGAAGAAGTTTCAAATGCGGTCAAGGCTGAGATTGAGAAAAAAATAGAAGAGCCGAAG
CAGGTCATATGGGATGGTCACACAGGTAGCATTGGCCGCACTGCAAGCCAGGCAATGTCT
CAGAACAATGCAGAGGATCAGAATGATGCTGCAAATGATGTAAGAAACCTTCCTGGTCCA
CAGGCTCCTCCACCTCCCAGACCCGGTCTTCCTTCTGTTAGGCCACTACCTCCACCTCCT
GGGCTTGCGCTGAATATTCCTAGGCCTCCTAATACATTCCAGTATTCCACACCAACCATT
GCTGGTGCTGCTCCGCCTCCACCTCAACCTCCTATGGTTAACATGATTCCTCAGGTTCGG
CCCCCACCTCCTCCCATGCTACAACTACAAGGTCAGCAAAACCTCATGGTCAATCGTCCC
CCAATGCCTCCATCAATGGCTATGAGTTCGCATACCCTTCCTATTCCACCACCTCCTGGA
TCACAGTTTACACCTATGGGAGCACCTCGGCCCTTTGTTCCCCACCCGATGTCCCAGCCC
GGAATGTCTATGGTCCCGCCTCCTCCTATGCCCCAAGGAATGCCGCCACCTCCTCCACCA
GAAGAAGCTCCTCCTCTCCCTGAAGAGCCGGAGCCGAAGAGGCAAAAGCTTGATGAGTCT
GTTCTCATTCCTGAAGACCAGTTTTTGGCTCAGCATTCGGGACCTGCAAGGATCAATGTA
TCTGTGCCGAATACCGATGAAGGGAATCTCAAAGGACAAGTTCTGGAAATCACTGTGCTA
TCTCTGTCTGAAACCATTGCCAGTCTGAAAGAGAAGATATCTGGGGAGATCCAGCTTCCT
GCGAACAAACAAAAGCTGAGTGGAAAGGCTGGTTTTCTCAAGGACAACTTGTCTCTTGCA
TACTATAATGTTGCTTCTGGAGAAACATTCAGTCTCTCTCTGAGAGAACGTGGTGGGAGA
AAGAGATGA