Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018884
CDS Infomation

pacid=37429009 polypeptide=PGSC0003DMP400012962 locus=PGSC0003DMG400007320 ID=PGSC0003DMT400018884.v4.03 annot-version=v4.03
Sequence

ATGCAGCCTCGGAGTAAGTCAAAGTTGTGGGCAAATGATGCATTAACAGCTCCGTCTCTT
GCCCGAAGTAAAAAGGATGGCGATAAGCAATACCAGAAAAAAGAAACTAGCCAGGAAAAA
ACGGATACTGATGACTCTGAGTTGGACGAGGTTATTAAAAAAAAGAAATCTCTGTCAGAT
AGTGAAAAATCTGAGAAACCTGGCGGCTCCCATAATGATGAAGTTATGACCGATACGGAT
TATTTCAAAAGTAGAGTGAGGAAAGATTGGTCCGACTCAGAAAGTAGTGAAGACGATGGT
AGTGATAATGAAAGTGACAAGAGCAGTGAAGATGCAAATGCTGGTAATATCCTTGAACCT
GATGATACAGAGGAATTTTTGAGTGATGGGCTCACCAGATCTAACAATGAGTCGCTTGAG
CCTGTTGACCCTTCATCAAGTGTTAAGGATGAAAAAGAAGAAAATCTGGAGAGCGGACGA
TTATTTGTTCGTAACCTTCCATACACCACTACGGAAGAGGAGCTGGAAGAACACTTTAAA
GCATTTGGCAATGTCTCACAGGTTCATATTGTTGTTGACAAAGATACAAAGCGGTCCAAA
GGAATTGCATATGTTCTCTATCCATTACCAGAATCTGCTGCTAGGGCATTAGCAGAGCTG
GACAGTTCAATCTTTCAAGGACGATTACTTCATGTTATGCCAGCGAAGCAGAAAATTTCT
CCAGAGAAGGCAGAGACAATTGCTAATACCAAGCAATCGTCAAACACATTTAAGCAGAAG
AGACAAGAGGAAAAGAAGGCATCTGAAGCTAGTGGAAATACACAATCTTGGAATACTCTG
TTTATGCGGCCAGACACTGTTGTTGAAAATATTGCAAGAAAATTTGGTGTGAGTAAAAGT
GATCTCCTTGATAGAGAAGCTGATGATCTTGCTGTGCGTATAGCGTTGGGCGAGACTCAA
GTGATAGCGGAGACAAAAAAGGCTCTTGCAAAAGCTGGAGTTAATATTGTTTCTTTGGAA
GAATACGCTGCTGGAAAAACTGATGGGGTGAAACGAAGCAATCATGTTATTCTAGTTAAG
AACTTGCCTTATGGTTCATCAGAAGGTGAACTTGCAAATATGTTTGGGAAGTTTGGGAGC
CTGGATAAAATTGTTCTTCCTCCTACCAAAACCTTAGCTTTGGTTGTCTTCCTAGAACCG
GCAGAAGCACGTTCAGCTTTCCGGGGTCTAGCATACAAACGTTACAAGGACACTCCCCTT
TATTTGGAGTGGGCTCCTGGAAATATTCTTGATCAAACAAGTGATTCAAAAAATGCTCTT
GTTGTTGGTGAAGATGATGCAAAGAGAGTGCTGCTAGAGCAACAAGTGGAAGGAGTAACG
GATCCAGATGTTGATCCTGATAGAGTTGAGTCACGATCACTGTATGTCAAGAACCTAAAT
TTCAAGACGTTGGATGAGAGCTTAAAAAAGCATTTCACCGACCACATAAAGGATGGGCGA
ATATTAAGTGTGAGGGTGAAGAAGCATGTAAAGAATGGAAAAAATGTCTCTATGGGTTTT
GGATTCGTTGAGTTTGATTCTGTTGATACAGCAATCAACGTTTGCAAGGATTTGCAGGGA
ACTGTTTTGGATGGCCATGCACTTATATTGCAACTTTGTCACACTAAGAAGGACCAATTA
CCAAAGAGAGCTGAGAATGACAAGAGTTCAACTAAGTTGCTTGTTAGGAATGTTGCTTTT
GAGGCAACTGAAAAGGATCTCAGGCAATTATTCAGTCCATTCGGGCAGATTAAGAGTTTA
AGGCTGCCAATGAGGTTTGGGAACCATAGAGGATTTGCATTTGTAGAGTTTGTCACGAAG
CAAGAGGCAAAGAACGCCATTGAAGCTCTATCCAGTACTCACTTGTATGGGCGCCATTTG
GTTCTGGAGAGAGCCAAGGAAGGTGAGAGCCTAGAGGAATTACGCGCTCGCACAGCTGCT
CAGTTTACTACTGAGCAAAATGGGTTTCAAACTACTAAATTATCAAAGAAGAGAAAGCAA
ATGGGTATACTGGATGATGGGAGTTCTAAATTCGGGCGAATTGCTGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012962
PEP Infomation

pacid=37429009 transcript=PGSC0003DMT400018884 locus=PGSC0003DMG400007320 ID=PGSC0003DMT400018884.v4.03 annot-version=v4.03
Sequence

MQPRSKSKLWANDALTAPSLARSKKDGDKQYQKKETSQEKTDTDDSELDEVIKKKKSLSD
SEKSEKPGGSHNDEVMTDTDYFKSRVRKDWSDSESSEDDGSDNESDKSSEDANAGNILEP
DDTEEFLSDGLTRSNNESLEPVDPSSSVKDEKEENLESGRLFVRNLPYTTTEEELEEHFK
AFGNVSQVHIVVDKDTKRSKGIAYVLYPLPESAARALAELDSSIFQGRLLHVMPAKQKIS
PEKAETIANTKQSSNTFKQKRQEEKKASEASGNTQSWNTLFMRPDTVVENIARKFGVSKS
DLLDREADDLAVRIALGETQVIAETKKALAKAGVNIVSLEEYAAGKTDGVKRSNHVILVK
NLPYGSSEGELANMFGKFGSLDKIVLPPTKTLALVVFLEPAEARSAFRGLAYKRYKDTPL
YLEWAPGNILDQTSDSKNALVVGEDDAKRVLLEQQVEGVTDPDVDPDRVESRSLYVKNLN
FKTLDESLKKHFTDHIKDGRILSVRVKKHVKNGKNVSMGFGFVEFDSVDTAINVCKDLQG
TVLDGHALILQLCHTKKDQLPKRAENDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSL
RLPMRFGNHRGFAFVEFVTKQEAKNAIEALSSTHLYGRHLVLERAKEGESLEELRARTAA
QFTTEQNGFQTTKLSKKRKQMGILDDGSSKFGRIAD*

Transcript Sequence

Transcript ID

PGSC0003DMT400018884
Transcript Infomation

pacid=37429009 locus=PGSC0003DMG400007320 ID=PGSC0003DMT400018884.v4.03 annot-version=v4.03
Sequence

ATGCAGCCTCGGAGTAAGTCAAAGTTGTGGGCAAATGATGCATTAACAGCTCCGTCTCTT
GCCCGAAGTAAAAAGGATGGCGATAAGCAATACCAGAAAAAAGAAACTAGCCAGGAAAAA
ACGGATACTGATGACTCTGAGTTGGACGAGGTTATTAAAAAAAAGAAATCTCTGTCAGAT
AGTGAAAAATCTGAGAAACCTGGCGGCTCCCATAATGATGAAGTTATGACCGATACGGAT
TATTTCAAAAGTAGAGTGAGGAAAGATTGGTCCGACTCAGAAAGTAGTGAAGACGATGGT
AGTGATAATGAAAGTGACAAGAGCAGTGAAGATGCAAATGCTGGTAATATCCTTGAACCT
GATGATACAGAGGAATTTTTGAGTGATGGGCTCACCAGATCTAACAATGAGTCGCTTGAG
CCTGTTGACCCTTCATCAAGTGTTAAGGATGAAAAAGAAGAAAATCTGGAGAGCGGACGA
TTATTTGTTCGTAACCTTCCATACACCACTACGGAAGAGGAGCTGGAAGAACACTTTAAA
GCATTTGGCAATGTCTCACAGGTTCATATTGTTGTTGACAAAGATACAAAGCGGTCCAAA
GGAATTGCATATGTTCTCTATCCATTACCAGAATCTGCTGCTAGGGCATTAGCAGAGCTG
GACAGTTCAATCTTTCAAGGACGATTACTTCATGTTATGCCAGCGAAGCAGAAAATTTCT
CCAGAGAAGGCAGAGACAATTGCTAATACCAAGCAATCGTCAAACACATTTAAGCAGAAG
AGACAAGAGGAAAAGAAGGCATCTGAAGCTAGTGGAAATACACAATCTTGGAATACTCTG
TTTATGCGGCCAGACACTGTTGTTGAAAATATTGCAAGAAAATTTGGTGTGAGTAAAAGT
GATCTCCTTGATAGAGAAGCTGATGATCTTGCTGTGCGTATAGCGTTGGGCGAGACTCAA
GTGATAGCGGAGACAAAAAAGGCTCTTGCAAAAGCTGGAGTTAATATTGTTTCTTTGGAA
GAATACGCTGCTGGAAAAACTGATGGGGTGAAACGAAGCAATCATGTTATTCTAGTTAAG
AACTTGCCTTATGGTTCATCAGAAGGTGAACTTGCAAATATGTTTGGGAAGTTTGGGAGC
CTGGATAAAATTGTTCTTCCTCCTACCAAAACCTTAGCTTTGGTTGTCTTCCTAGAACCG
GCAGAAGCACGTTCAGCTTTCCGGGGTCTAGCATACAAACGTTACAAGGACACTCCCCTT
TATTTGGAGTGGGCTCCTGGAAATATTCTTGATCAAACAAGTGATTCAAAAAATGCTCTT
GTTGTTGGTGAAGATGATGCAAAGAGAGTGCTGCTAGAGCAACAAGTGGAAGGAGTAACG
GATCCAGATGTTGATCCTGATAGAGTTGAGTCACGATCACTGTATGTCAAGAACCTAAAT
TTCAAGACGTTGGATGAGAGCTTAAAAAAGCATTTCACCGACCACATAAAGGATGGGCGA
ATATTAAGTGTGAGGGTGAAGAAGCATGTAAAGAATGGAAAAAATGTCTCTATGGGTTTT
GGATTCGTTGAGTTTGATTCTGTTGATACAGCAATCAACGTTTGCAAGGATTTGCAGGGA
ACTGTTTTGGATGGCCATGCACTTATATTGCAACTTTGTCACACTAAGAAGGACCAATTA
CCAAAGAGAGCTGAGAATGACAAGAGTTCAACTAAGTTGCTTGTTAGGAATGTTGCTTTT
GAGGCAACTGAAAAGGATCTCAGGCAATTATTCAGTCCATTCGGGCAGATTAAGAGTTTA
AGGCTGCCAATGAGGTTTGGGAACCATAGAGGATTTGCATTTGTAGAGTTTGTCACGAAG
CAAGAGGCAAAGAACGCCATTGAAGCTCTATCCAGTACTCACTTGTATGGGCGCCATTTG
GTTCTGGAGAGAGCCAAGGAAGGTGAGAGCCTAGAGGAATTACGCGCTCGCACAGCTGCT
CAGTTTACTACTGAGCAAAATGGGTTTCAAACTACTAAATTATCAAAGAAGAGAAAGCAA
ATGGGTATACTGGATGATGGGAGTTCTAAATTCGGGCGAATTGCTGATTAA