Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018872
CDS Infomation

pacid=37429096 polypeptide=PGSC0003DMP400012956 locus=PGSC0003DMG400007317 ID=PGSC0003DMT400018872.v4.03 annot-version=v4.03
Sequence

ATGGGAGATGAGATACAGCCAAGAAGTTATTGGAGATGGAGCAAACACGATTTCTTCCCG
GGAGATTCTTTCCAGAATTGGAGCGCATACCGATCAGCACTGTCACAAACATTTACCAGA
TTGAAGGAACGAGTTGCAAGCCGTTCTGAGGATGCTGATGAGATTGTGGAGCTAAGGAAA
GAAAGTGAGAATGAGATGAAACGTTGCCTTAGTTGGTGGGACCTCATCTGGTTTGGCTTT
GGCTCTGTTATTGGAGCAGGCATCTTCGTACTCACTGGCCAAGAAGCTCATGAACATGCC
GGACCAGCTATAGTTTTATCCTATGTGGCTTCTGGCATTTCAGCAATGCTCTCTGTTTTC
TGCTACACAGAATTTGCAGTAGAAATTCCTGTAGCAGGGGGTTCATTTGCATACATCAGA
GTAGAACTGGGAGACTTTGCAGCCTTTATCACAGCAGGAAACATAATTCTTGGATCCATT
GCTGGTAGTGCCGCAGTAGCAAGAGCCTGGACTTCTTACTTTACAACTCTCTTGAATCGT
CATCCAAACTCTTTACGTATACATACAAATCTCATAGACGGGTTCAACTTACTAGATCCA
ATAGCTGTTGCAATTTTAGCAATTACATCAATAATTGCAATAAGCAGCACTAGAAGAACT
TCATACTTAAACTGGATAGCATCAGCAGTTAATATGGTGGTGATTTCATTTGTCATAATT
GCTGGACTTGCTCATGCCAATACCTCCAATTTGACACCCTTTGCGCCACATGGTGCCAAA
GGTATCTTCGTTGCAGCGGCAATAGTGTATTTTGCATATGGGGGTTTTGACAACATTGCA
ACCATGGCAGAGGAAACAAAAAATCCATCGAAAGATATACCACTAGGGTTGCTAGGATCA
ATGTCAATTATCACTGTGATATATTGCTTGATGGCACTTTCACTAAGTATGATGCAAAAG
TATACAGATATAGACCCTAACGCCGCCTACTCTGTTGCATTTCAAAAAGTGGGGATGAAA
TGGGCAAAATACCTGGTTGCCCTTGGAGCTCTGAAAGGAATGACCACTGTCCTTTTGGCA
GGAGCAATTGGACAGGCACGCTATGCCACTCATATTGCACGAGTTCATATGATTCCACCA
TGGTTTTCACTTGTTCACCCAAAGACAGGAACTCCCATAAATGCAACTCTCTTGATCAGA
CTTGTAAGTGCCTGTATAGCATTCTTTTCAAGTTTGGATGTCTTGGCAAGTTTGTTATCT
ATAAGCGGCCTACTAATATCCATGATGATGGCTGTTGCTCTGCTTGTGAGGAGATACTAT
GTCAGAGGTATCACCCCCCGGACGAATCTTTTGAAGCTTACCTTCTTTCTACTGGTCATA
ATTGTATCCTCCGTTGGGACTTCTGCTTATTGGGGACTGGACCCTAATGGTTGGCTTGGT
TACACAGTAACTGTTCCCCTTTGGTTCCTGGCAACCTTGGCAATTTCGGTTCTTTTGCCA
CAGGATAGAACACCAAAAGTCTGGGGAGTCCCACTGGTTCCTTGGTTCCCATCCCTCTCA
GTTGCAATAAACGTGTTTCTCATGGGATCATTAGGAGCTCAGGCATTTATAAGGTTTGGC
ATATGTACGGTTGTAATGCTGATATATTATATATTTTTTGGCCTCCATGCAACTTATGAC
ATGGCTCATCAACCAAAGAAGCCAACGACTTCAAGGATCTTAGAAGAAGATATGGGAAGC
GCTAGGGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400012956
PEP Infomation

pacid=37429096 transcript=PGSC0003DMT400018872 locus=PGSC0003DMG400007317 ID=PGSC0003DMT400018872.v4.03 annot-version=v4.03
Sequence

MGDEIQPRSYWRWSKHDFFPGDSFQNWSAYRSALSQTFTRLKERVASRSEDADEIVELRK
ESENEMKRCLSWWDLIWFGFGSVIGAGIFVLTGQEAHEHAGPAIVLSYVASGISAMLSVF
CYTEFAVEIPVAGGSFAYIRVELGDFAAFITAGNIILGSIAGSAAVARAWTSYFTTLLNR
HPNSLRIHTNLIDGFNLLDPIAVAILAITSIIAISSTRRTSYLNWIASAVNMVVISFVII
AGLAHANTSNLTPFAPHGAKGIFVAAAIVYFAYGGFDNIATMAEETKNPSKDIPLGLLGS
MSIITVIYCLMALSLSMMQKYTDIDPNAAYSVAFQKVGMKWAKYLVALGALKGMTTVLLA
GAIGQARYATHIARVHMIPPWFSLVHPKTGTPINATLLIRLVSACIAFFSSLDVLASLLS
ISGLLISMMMAVALLVRRYYVRGITPRTNLLKLTFFLLVIIVSSVGTSAYWGLDPNGWLG
YTVTVPLWFLATLAISVLLPQDRTPKVWGVPLVPWFPSLSVAINVFLMGSLGAQAFIRFG
ICTVVMLIYYIFFGLHATYDMAHQPKKPTTSRILEEDMGSARA*

Transcript Sequence

Transcript ID

PGSC0003DMT400018872
Transcript Infomation

pacid=37429096 locus=PGSC0003DMG400007317 ID=PGSC0003DMT400018872.v4.03 annot-version=v4.03
Sequence

ATGGGAGATGAGATACAGCCAAGAAGTTATTGGAGATGGAGCAAACACGATTTCTTCCCG
GGAGATTCTTTCCAGAATTGGAGCGCATACCGATCAGCACTGTCACAAACATTTACCAGA
TTGAAGGAACGAGTTGCAAGCCGTTCTGAGGATGCTGATGAGATTGTGGAGCTAAGGAAA
GAAAGTGAGAATGAGATGAAACGTTGCCTTAGTTGGTGGGACCTCATCTGGTTTGGCTTT
GGCTCTGTTATTGGAGCAGGCATCTTCGTACTCACTGGCCAAGAAGCTCATGAACATGCC
GGACCAGCTATAGTTTTATCCTATGTGGCTTCTGGCATTTCAGCAATGCTCTCTGTTTTC
TGCTACACAGAATTTGCAGTAGAAATTCCTGTAGCAGGGGGTTCATTTGCATACATCAGA
GTAGAACTGGGAGACTTTGCAGCCTTTATCACAGCAGGAAACATAATTCTTGGATCCATT
GCTGGTAGTGCCGCAGTAGCAAGAGCCTGGACTTCTTACTTTACAACTCTCTTGAATCGT
CATCCAAACTCTTTACGTATACATACAAATCTCATAGACGGGTTCAACTTACTAGATCCA
ATAGCTGTTGCAATTTTAGCAATTACATCAATAATTGCAATAAGCAGCACTAGAAGAACT
TCATACTTAAACTGGATAGCATCAGCAGTTAATATGGTGGTGATTTCATTTGTCATAATT
GCTGGACTTGCTCATGCCAATACCTCCAATTTGACACCCTTTGCGCCACATGGTGCCAAA
GGTATCTTCGTTGCAGCGGCAATAGTGTATTTTGCATATGGGGGTTTTGACAACATTGCA
ACCATGGCAGAGGAAACAAAAAATCCATCGAAAGATATACCACTAGGGTTGCTAGGATCA
ATGTCAATTATCACTGTGATATATTGCTTGATGGCACTTTCACTAAGTATGATGCAAAAG
TATACAGATATAGACCCTAACGCCGCCTACTCTGTTGCATTTCAAAAAGTGGGGATGAAA
TGGGCAAAATACCTGGTTGCCCTTGGAGCTCTGAAAGGAATGACCACTGTCCTTTTGGCA
GGAGCAATTGGACAGGCACGCTATGCCACTCATATTGCACGAGTTCATATGATTCCACCA
TGGTTTTCACTTGTTCACCCAAAGACAGGAACTCCCATAAATGCAACTCTCTTGATCAGA
CTTGTAAGTGCCTGTATAGCATTCTTTTCAAGTTTGGATGTCTTGGCAAGTTTGTTATCT
ATAAGCGGCCTACTAATATCCATGATGATGGCTGTTGCTCTGCTTGTGAGGAGATACTAT
GTCAGAGGTATCACCCCCCGGACGAATCTTTTGAAGCTTACCTTCTTTCTACTGGTCATA
ATTGTATCCTCCGTTGGGACTTCTGCTTATTGGGGACTGGACCCTAATGGTTGGCTTGGT
TACACAGTAACTGTTCCCCTTTGGTTCCTGGCAACCTTGGCAATTTCGGTTCTTTTGCCA
CAGGATAGAACACCAAAAGTCTGGGGAGTCCCACTGGTTCCTTGGTTCCCATCCCTCTCA
GTTGCAATAAACGTGTTTCTCATGGGATCATTAGGAGCTCAGGCATTTATAAGGTTTGGC
ATATGTACGGTTGTAATGCTGATATATTATATATTTTTTGGCCTCCATGCAACTTATGAC
ATGGCTCATCAACCAAAGAAGCCAACGACTTCAAGGATCTTAGAAGAAGATATGGGAAGC
GCTAGGGCATAA