Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018871
CDS Infomation

pacid=37424307 polypeptide=PGSC0003DMP400012955 locus=PGSC0003DMG400007316 ID=PGSC0003DMT400018871.v4.03 annot-version=v4.03
Sequence

ATGGTGGGAGAGGACAAAGCTGAGCTAGGGGGTTTGCTTGAAATTCTACCCCCTGTTGAG
TTCTGCTGTATATATGGTTCTAAACTCCATCCCAACAACAAAGATGAGACATCTATGACA
GATTACATAATTGGAGTATCTGATCCTCGACAATGGCATTCTGAGAATCTAAAATTGAAC
AAGGATCACTATGCTTCGTGTCTCATCCGCCTTGGTGGAGCAAGGATGATAACTGATATT
GCAAATGACATTGGTGTTGGCGTACACTTCAACCCATTTGTGTCTTGCAACAACAAGATG
GTCAAGTATGGAGTTGTACGGATGCATGACTTGATTCAAGACATATTGGGATGGGAGAGG
TTCTATCTCAGCGGTCGTTTGCAGAAACCAGTGAACATTCTTATGGATAACTTGGATATA
AAAAACGTGAACAGCGTGAACCTGAAAGCTGCAACTTCTGCTGCTCTTCTCCTTTTGCCA
TCAAAATTCACGGAGGAAGATTTATACGCCAAAATTTGTAGCCTCTCATATACAGGTGAC
TTGCGTATGCTTTTTGCAGAGGACAAAAATAAGGTGAACAAAATTGTACAAGGACAGTTC
CATTTATTTGAGGAAATGTATAAGCCATTTCTGGAAGAATATGAGGCCAAAAACTTGTTG
AGATTTTCATTAGCTGGTGATAAGCAAGTAAACATATTGCAGGATTGTGGATTATCTGCT
GCTTCCACCTTGGTTTCTTCCCTTCCTTCATCAATCAGAAGTGAGATGGCCATGAAACTT
GGAGATAAACGAATTCTGGATGACTCTGGTAGAGTTAGACAACAAGTAGTGATTGGTTCA
AAAGAACAGGCTGCTGAGTGCATGAAAAGGCTAGTTAGACGTAAGGTTATGTTTTCTAGC
ACAAGGCAGGCTGTTGCAGGTTTATTGACTGCTGGTGCTGTTCATGGAGTCAGATATGTT
GCAAACAAGATGCACAAGGCTTGGAAATCTTGGGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012955
PEP Infomation

pacid=37424307 transcript=PGSC0003DMT400018871 locus=PGSC0003DMG400007316 ID=PGSC0003DMT400018871.v4.03 annot-version=v4.03
Sequence

MVGEDKAELGGLLEILPPVEFCCIYGSKLHPNNKDETSMTDYIIGVSDPRQWHSENLKLN
KDHYASCLIRLGGARMITDIANDIGVGVHFNPFVSCNNKMVKYGVVRMHDLIQDILGWER
FYLSGRLQKPVNILMDNLDIKNVNSVNLKAATSAALLLLPSKFTEEDLYAKICSLSYTGD
LRMLFAEDKNKVNKIVQGQFHLFEEMYKPFLEEYEAKNLLRFSLAGDKQVNILQDCGLSA
ASTLVSSLPSSIRSEMAMKLGDKRILDDSGRVRQQVVIGSKEQAAECMKRLVRRKVMFSS
TRQAVAGLLTAGAVHGVRYVANKMHKAWKSWV*

Transcript Sequence

Transcript ID

PGSC0003DMT400018871
Transcript Infomation

pacid=37424307 locus=PGSC0003DMG400007316 ID=PGSC0003DMT400018871.v4.03 annot-version=v4.03
Sequence

ATGGTGGGAGAGGACAAAGCTGAGCTAGGGGGTTTGCTTGAAATTCTACCCCCTGTTGAG
TTCTGCTGTATATATGGTTCTAAACTCCATCCCAACAACAAAGATGAGACATCTATGACA
GATTACATAATTGGAGTATCTGATCCTCGACAATGGCATTCTGAGAATCTAAAATTGAAC
AAGGATCACTATGCTTCGTGTCTCATCCGCCTTGGTGGAGCAAGGATGATAACTGATATT
GCAAATGACATTGGTGTTGGCGTACACTTCAACCCATTTGTGTCTTGCAACAACAAGATG
GTCAAGTATGGAGTTGTACGGATGCATGACTTGATTCAAGACATATTGGGATGGGAGAGG
TTCTATCTCAGCGGTCGTTTGCAGAAACCAGTGAACATTCTTATGGATAACTTGGATATA
AAAAACGTGAACAGCGTGAACCTGAAAGCTGCAACTTCTGCTGCTCTTCTCCTTTTGCCA
TCAAAATTCACGGAGGAAGATTTATACGCCAAAATTTGTAGCCTCTCATATACAGGTGAC
TTGCGTATGCTTTTTGCAGAGGACAAAAATAAGGTGAACAAAATTGTACAAGGACAGTTC
CATTTATTTGAGGAAATGTATAAGCCATTTCTGGAAGAATATGAGGCCAAAAACTTGTTG
AGATTTTCATTAGCTGGTGATAAGCAAGTAAACATATTGCAGGATTGTGGATTATCTGCT
GCTTCCACCTTGGTTTCTTCCCTTCCTTCATCAATCAGAAGTGAGATGGCCATGAAACTT
GGAGATAAACGAATTCTGGATGACTCTGGTAGAGTTAGACAACAAGTAGTGATTGGTTCA
AAAGAACAGGCTGCTGAGTGCATGAAAAGGCTAGTTAGACGTAAGGTTATGTTTTCTAGC
ACAAGGCAGGCTGTTGCAGGTTTATTGACTGCTGGTGCTGTTCATGGAGTCAGATATGTT
GCAAACAAGATGCACAAGGCTTGGAAATCTTGGGTGTAA