Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018869
CDS Infomation

pacid=37427897 polypeptide=PGSC0003DMP400012953 locus=PGSC0003DMG400007315 ID=PGSC0003DMT400018869.v4.03 annot-version=v4.03
Sequence

ATGACTGACGTTGAGCTCTCTCGCTCAGAGAAGAAGAAAAAGAAATCAAAGTCTGGCAAA
AATGAAGACGAAACCCAAACACTATCCACCCCAATTGATGGTGATTTTCTCATCAAACCT
CAAAGCTACACCCCCACCATTGACACTTCAGAATGGCCGATTCTCTTGAAAAACTACGAT
CGTCTCAATGTCAGAACGGGTCACTACACTCCTCTCCCGTCTGGGTATTCTCCATTGAAG
CGTCCGCTTGCTGAGTATATAAGGTATGGTATTCTTAATCTTGATAAACCTGCTAATCCA
TCTTCACATGAAGTTGTAGCTTGGATTAAGAGGATCCTTCGGGTCGAGAAAACGGGTCAT
AGTGGTACTTTGGATCCTAAAGTTACTGGGAATTTGATTGTTTGTATTGATAGAGCGACC
CGTTTGGTTAAGTCCCAACAGGGTGCGGGTAAGGAGTATGTGTGTGTAGCTAGGTTGCAT
TCTGATGTACCTGATGTTGCTAAGGTTGCTAGAGCACTTGAAGCTCTTACTGGGGCTGTT
TTTCAAAGACCCCCGTTGATTTCTGCTGTGAAAAGGCAACTTAGGATTAGGACTATTTAT
GAAAGTAAGTTGCTTGAGTATGATGCTGATAGGCATTTGGTTGTTTTTTGGATATCGTGT
GAGGCGGGTACTTATGTTAGGACATTGTGTGTTCATCTTGGGTTGCTTTTGGGTGTGGGT
GGACATATGCAGGAGCTTAGGAGAGTAAGGTCTGGGATTTTAGGTGAGAAGAATAATATG
GTGACAATGCATGATGTGATGGATGCACAATGGATGTATGATAACTATAGGGATGAGACT
TACTTGAGGAGGGTCATTATGCCGTTGGAGGTAGTTTTGACTAGTTATAAGAGGTTGGTG
GTTAAGGATTCGGCAGTTAATGCTATTTGCTATGGTGCAAAGTTGATGATTCCTGGGCTT
CTAAGGTTTGAGAATGATATTGAGGTTGGAGAGGAGGTTGTGTTGATGACTACTAAGGGG
GAGGCCATCGCGTTGGGGATTGCAGAGATGACCACGGCTGTTATGGGAACTTGTGATCAT
GGTGTGGTTGCAAAGATTAAGAGAGTGGTGATGGATAGGGATACTTATCCTAGGAAATGG
GGCTTAGGACCAAGGGCTTCAATGAAGAAGAAGTTGGTTGCTGAGGGTAAGTTGGATAAA
CATGGTAAGCCAAATGATAAAACTCCAGCTGAGTGGTCGAGAAATGTTGTTTTATCCACC
AAAGAGGATACTATGGTAGCTGGTCTTGCTGCTGCTGCTGATGGTGAGATTGAGAAGAAA
AAGAAGAAACATAAGGAAGATGATGAGGAGGCCAACAAGAGAAAATTGGATGATTTAGAT
GTATCCCCTGCACCCAGTGCTTTAAAGAAACCAAAGGTAGAGTTAGTCGAGGAAGCTGTA
GAGAAGTCTGAACTGAAAAAAGAAAAGAAGAAGAAAAAGAAGAAAGAAGCTGATGAAGCT
GGATCCCCTGATGTAGAGTCCTTGAAAAAGGAAAAGAAAAAGAAGGACAAAGAGAATAAT
GATGCTGCATCCTCAGATGAGGAGAAGTCCGAGAAGAAGAAAAAGAAGAAGAAGAAAGAT
AAAGAATCAGAGAATGGTGATGTTGGAAGTGACGATGAAGGAAGTAAAAGCAAGAAGAAG
GAGAAGAAGAAAAAGAAGAATAAAGATGCACAAGAGGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012953
PEP Infomation

pacid=37427897 transcript=PGSC0003DMT400018869 locus=PGSC0003DMG400007315 ID=PGSC0003DMT400018869.v4.03 annot-version=v4.03
Sequence

MTDVELSRSEKKKKKSKSGKNEDETQTLSTPIDGDFLIKPQSYTPTIDTSEWPILLKNYD
RLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGH
SGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDVPDVAKVARALEALTGAV
FQRPPLISAVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTLCVHLGLLLGVG
GHMQELRRVRSGILGEKNNMVTMHDVMDAQWMYDNYRDETYLRRVIMPLEVVLTSYKRLV
VKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMGTCDH
GVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWSRNVVLST
KEDTMVAGLAAAADGEIEKKKKKHKEDDEEANKRKLDDLDVSPAPSALKKPKVELVEEAV
EKSELKKEKKKKKKKEADEAGSPDVESLKKEKKKKDKENNDAASSDEEKSEKKKKKKKKD
KESENGDVGSDDEGSKSKKKEKKKKKNKDAQEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400018869
Transcript Infomation

pacid=37427897 locus=PGSC0003DMG400007315 ID=PGSC0003DMT400018869.v4.03 annot-version=v4.03
Sequence

ATGACTGACGTTGAGCTCTCTCGCTCAGAGAAGAAGAAAAAGAAATCAAAGTCTGGCAAA
AATGAAGACGAAACCCAAACACTATCCACCCCAATTGATGGTGATTTTCTCATCAAACCT
CAAAGCTACACCCCCACCATTGACACTTCAGAATGGCCGATTCTCTTGAAAAACTACGAT
CGTCTCAATGTCAGAACGGGTCACTACACTCCTCTCCCGTCTGGGTATTCTCCATTGAAG
CGTCCGCTTGCTGAGTATATAAGGTATGGTATTCTTAATCTTGATAAACCTGCTAATCCA
TCTTCACATGAAGTTGTAGCTTGGATTAAGAGGATCCTTCGGGTCGAGAAAACGGGTCAT
AGTGGTACTTTGGATCCTAAAGTTACTGGGAATTTGATTGTTTGTATTGATAGAGCGACC
CGTTTGGTTAAGTCCCAACAGGGTGCGGGTAAGGAGTATGTGTGTGTAGCTAGGTTGCAT
TCTGATGTACCTGATGTTGCTAAGGTTGCTAGAGCACTTGAAGCTCTTACTGGGGCTGTT
TTTCAAAGACCCCCGTTGATTTCTGCTGTGAAAAGGCAACTTAGGATTAGGACTATTTAT
GAAAGTAAGTTGCTTGAGTATGATGCTGATAGGCATTTGGTTGTTTTTTGGATATCGTGT
GAGGCGGGTACTTATGTTAGGACATTGTGTGTTCATCTTGGGTTGCTTTTGGGTGTGGGT
GGACATATGCAGGAGCTTAGGAGAGTAAGGTCTGGGATTTTAGGTGAGAAGAATAATATG
GTGACAATGCATGATGTGATGGATGCACAATGGATGTATGATAACTATAGGGATGAGACT
TACTTGAGGAGGGTCATTATGCCGTTGGAGGTAGTTTTGACTAGTTATAAGAGGTTGGTG
GTTAAGGATTCGGCAGTTAATGCTATTTGCTATGGTGCAAAGTTGATGATTCCTGGGCTT
CTAAGGTTTGAGAATGATATTGAGGTTGGAGAGGAGGTTGTGTTGATGACTACTAAGGGG
GAGGCCATCGCGTTGGGGATTGCAGAGATGACCACGGCTGTTATGGGAACTTGTGATCAT
GGTGTGGTTGCAAAGATTAAGAGAGTGGTGATGGATAGGGATACTTATCCTAGGAAATGG
GGCTTAGGACCAAGGGCTTCAATGAAGAAGAAGTTGGTTGCTGAGGGTAAGTTGGATAAA
CATGGTAAGCCAAATGATAAAACTCCAGCTGAGTGGTCGAGAAATGTTGTTTTATCCACC
AAAGAGGATACTATGGTAGCTGGTCTTGCTGCTGCTGCTGATGGTGAGATTGAGAAGAAA
AAGAAGAAACATAAGGAAGATGATGAGGAGGCCAACAAGAGAAAATTGGATGATTTAGAT
GTATCCCCTGCACCCAGTGCTTTAAAGAAACCAAAGGTAGAGTTAGTCGAGGAAGCTGTA
GAGAAGTCTGAACTGAAAAAAGAAAAGAAGAAGAAAAAGAAGAAAGAAGCTGATGAAGCT
GGATCCCCTGATGTAGAGTCCTTGAAAAAGGAAAAGAAAAAGAAGGACAAAGAGAATAAT
GATGCTGCATCCTCAGATGAGGAGAAGTCCGAGAAGAAGAAAAAGAAGAAGAAGAAAGAT
AAAGAATCAGAGAATGGTGATGTTGGAAGTGACGATGAAGGAAGTAAAAGCAAGAAGAAG
GAGAAGAAGAAAAAGAAGAATAAAGATGCACAAGAGGAGTAG