Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018834
CDS Infomation

pacid=37453590 polypeptide=PGSC0003DMP400012932 locus=PGSC0003DMG400007302 ID=PGSC0003DMT400018834.v4.03 annot-version=v4.03
Sequence

ATGGCTGCATCTCCTCCATTTCTTGCCTGTGGAGAAAAAAAGCCCTGGTGGGTTAGCAAC
AAAAAGATTGTGGAAAGATATATCAGAGATGCCAAAATTCTCATTGCCACTCAAGAACCA
AATGAGATTTCTTCAGCTCTTGCCCTTGTTGAAGCTGCACTTGCAATTTCTCCGCGTTTT
GAATTAGCCCTAGAGTTAAAGGCTCGATCTTTGCTTTATTTAAGGTGTTTTAAGGATGTA
GCTTATATGCTAAAAGATTATATTCCTAGTCTGAAAATGCCTAGTGATGACACATCATCT
ACCTCTTCTTCTGGTTCATTTGATAGCTCAAAGGAGCAAATCAGGCTTATTTCTTATGGT
GATGAACCTAACTTCAAGTGCTTCTCTATATCTTATTTGAAGAAGAAGGTTATGGCTAGT
CTTTACAAGAATTGCAATAAAGAAGGTCAATGGAGGTACTTGGTCTTAGGACAAGCTTGT
TGCCATTTGGGCCTAATGGAAGATGCAATGGTTCTGTTACAAACTGGCAAACGCCTTGCT
ACGGATGCATTTCGACGTGAGAGCATTTGTTGGTCTGAGGATAGCTTCTCGTTTGCCAAA
TTTCCAATCTCAAGCAAAAATCGTTGCACAGCTTTGCCAATAACCGAGTCAGAAACAATA
TCTCAACTTCTCAGTCATATCAAGCTGCTACTACGACGAAAAACTGCTGCACTTGCAGCT
CTTGATGCTGGTCTTTACTCAGAAGCTATTAGGCATTTTTCAAAAATTGTGGATGGTCGT
CGTGGTGCCCCTCAGGGGTTTATGGCTGAATGCTATATGCATCGAGCATCAGCGTATCAT
TCTTCTGGTCGAATTGCAGAGGCAATAGCTGATTGCAATCGAACGCTAGCATTGGACCCG
TCTTGTATTGATGCTCTTAGAACTAGAGCCGCACTATTTGAAACCATAAGATGCTTGCCT
GATAGTCTTCATGATTTGGAGCACTTAAAACTCTTGTACAATTCAATGCTACGGGATAGG
AAACTACCAGGACCAATATGGAAGCGTCAAAATGTGGAATACAGGGAGATTCCAGGGAGA
CTTTGTTCCTTGGCTACAAATATTCAAGAATTGAAGAAGAGGGTTGCAAATGGCGAAACG
GGGAATGTAGATTACTATGCATTGATTGGTTTAAACTGGGGTTGTTCAAGATCAGAACTG
GAAAGAGCACATTTGTTGCTAACTTTAAGACACAAGCCTGACAAATTGACGAGTTTCATA
GAAAGGTGTGAGTTTGCAGATGAACAAGATGTAGATTCTGTAAGGGATAGAGCAAAGATG
TCAGCTTTACTGCTCTATAGACTGATACAGAGGGGCTACGCTAGTTTGATGGCGACAATC
AAGGACGAAGAAGCAGCTGAGAAGAAGAGAAAGAAAGCTGCAGCTGCATTGCAACTGATG
CAGCAACAAGTTCAGCTAAATCAAGAACAACAACAATCAAGGACTGAAACTTTTGGCACA
GTTGTAATGCAGCAACAAGTTCAGAAAATTCAAGAACTTCAACGATCTGTACCTGAAACT
CTTGATTCAGATGTGTGCAATACTGCATTATGTAGTAACACAAACGCGACAGTGTTCAAA
GGGGCGTTCTGCAGAGAGATTGCGATAGTTGGGAATATGTTGTCTCAAGCTGGATTTAAT
CAACCAATTCCAGTGAAATATGAAGCATTGAGTTGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012932
PEP Infomation

pacid=37453590 transcript=PGSC0003DMT400018834 locus=PGSC0003DMG400007302 ID=PGSC0003DMT400018834.v4.03 annot-version=v4.03
Sequence

MAASPPFLACGEKKPWWVSNKKIVERYIRDAKILIATQEPNEISSALALVEAALAISPRF
ELALELKARSLLYLRCFKDVAYMLKDYIPSLKMPSDDTSSTSSSGSFDSSKEQIRLISYG
DEPNFKCFSISYLKKKVMASLYKNCNKEGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLA
TDAFRRESICWSEDSFSFAKFPISSKNRCTALPITESETISQLLSHIKLLLRRKTAALAA
LDAGLYSEAIRHFSKIVDGRRGAPQGFMAECYMHRASAYHSSGRIAEAIADCNRTLALDP
SCIDALRTRAALFETIRCLPDSLHDLEHLKLLYNSMLRDRKLPGPIWKRQNVEYREIPGR
LCSLATNIQELKKRVANGETGNVDYYALIGLNWGCSRSELERAHLLLTLRHKPDKLTSFI
ERCEFADEQDVDSVRDRAKMSALLLYRLIQRGYASLMATIKDEEAAEKKRKKAAAALQLM
QQQVQLNQEQQQSRTETFGTVVMQQQVQKIQELQRSVPETLDSDVCNTALCSNTNATVFK
GAFCREIAIVGNMLSQAGFNQPIPVKYEALSC*

Transcript Sequence

Transcript ID

PGSC0003DMT400018834
Transcript Infomation

pacid=37453590 locus=PGSC0003DMG400007302 ID=PGSC0003DMT400018834.v4.03 annot-version=v4.03
Sequence

ATGGCTGCATCTCCTCCATTTCTTGCCTGTGGAGAAAAAAAGCCCTGGTGGGTTAGCAAC
AAAAAGATTGTGGAAAGATATATCAGAGATGCCAAAATTCTCATTGCCACTCAAGAACCA
AATGAGATTTCTTCAGCTCTTGCCCTTGTTGAAGCTGCACTTGCAATTTCTCCGCGTTTT
GAATTAGCCCTAGAGTTAAAGGCTCGATCTTTGCTTTATTTAAGGTGTTTTAAGGATGTA
GCTTATATGCTAAAAGATTATATTCCTAGTCTGAAAATGCCTAGTGATGACACATCATCT
ACCTCTTCTTCTGGTTCATTTGATAGCTCAAAGGAGCAAATCAGGCTTATTTCTTATGGT
GATGAACCTAACTTCAAGTGCTTCTCTATATCTTATTTGAAGAAGAAGGTTATGGCTAGT
CTTTACAAGAATTGCAATAAAGAAGGTCAATGGAGGTACTTGGTCTTAGGACAAGCTTGT
TGCCATTTGGGCCTAATGGAAGATGCAATGGTTCTGTTACAAACTGGCAAACGCCTTGCT
ACGGATGCATTTCGACGTGAGAGCATTTGTTGGTCTGAGGATAGCTTCTCGTTTGCCAAA
TTTCCAATCTCAAGCAAAAATCGTTGCACAGCTTTGCCAATAACCGAGTCAGAAACAATA
TCTCAACTTCTCAGTCATATCAAGCTGCTACTACGACGAAAAACTGCTGCACTTGCAGCT
CTTGATGCTGGTCTTTACTCAGAAGCTATTAGGCATTTTTCAAAAATTGTGGATGGTCGT
CGTGGTGCCCCTCAGGGGTTTATGGCTGAATGCTATATGCATCGAGCATCAGCGTATCAT
TCTTCTGGTCGAATTGCAGAGGCAATAGCTGATTGCAATCGAACGCTAGCATTGGACCCG
TCTTGTATTGATGCTCTTAGAACTAGAGCCGCACTATTTGAAACCATAAGATGCTTGCCT
GATAGTCTTCATGATTTGGAGCACTTAAAACTCTTGTACAATTCAATGCTACGGGATAGG
AAACTACCAGGACCAATATGGAAGCGTCAAAATGTGGAATACAGGGAGATTCCAGGGAGA
CTTTGTTCCTTGGCTACAAATATTCAAGAATTGAAGAAGAGGGTTGCAAATGGCGAAACG
GGGAATGTAGATTACTATGCATTGATTGGTTTAAACTGGGGTTGTTCAAGATCAGAACTG
GAAAGAGCACATTTGTTGCTAACTTTAAGACACAAGCCTGACAAATTGACGAGTTTCATA
GAAAGGTGTGAGTTTGCAGATGAACAAGATGTAGATTCTGTAAGGGATAGAGCAAAGATG
TCAGCTTTACTGCTCTATAGACTGATACAGAGGGGCTACGCTAGTTTGATGGCGACAATC
AAGGACGAAGAAGCAGCTGAGAAGAAGAGAAAGAAAGCTGCAGCTGCATTGCAACTGATG
CAGCAACAAGTTCAGCTAAATCAAGAACAACAACAATCAAGGACTGAAACTTTTGGCACA
GTTGTAATGCAGCAACAAGTTCAGAAAATTCAAGAACTTCAACGATCTGTACCTGAAACT
CTTGATTCAGATGTGTGCAATACTGCATTATGTAGTAACACAAACGCGACAGTGTTCAAA
GGGGCGTTCTGCAGAGAGATTGCGATAGTTGGGAATATGTTGTCTCAAGCTGGATTTAAT
CAACCAATTCCAGTGAAATATGAAGCATTGAGTTGTTGA