Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018809
CDS Infomation

pacid=37454554 polypeptide=PGSC0003DMP400012917 locus=PGSC0003DMG400007292 ID=PGSC0003DMT400018809.v4.03 annot-version=v4.03
Sequence

ATGGGTTCACACATGATGGAACCAGATGACTTAGCAACGTATGCTAAAATATTTAGACAT
GGACAAAATGATTCATCAATTTGCATGTCAATTGGCAAAATTCAATCCAAAGGTTCCATC
TTATTCCATAACACGAACCCATTAGATTACTCTGTTCCTCTCCTACTCTCTCAGCTCTCC
TTGGCTTCCCTCTTCATTCTTTTCACTTCTACCGTCTTCAAACCCCTCGGTCAACCATCT
AATGTCATTCAAATTTTTGGTGGCTTACTACTAGGTCCGTCCTTTCTAGGACGAATTGAT
GGATTCATACAGCTTTTCTATCCTTACAGAAGTCTGGTAGTTATCGATGCTGTTGCATTA
TTTGGTTATATGTTCTTCTTCTTCTTGATTGGAGTGCAAATAGATCCTTGGATTCTCAAG
AGAGTTGAGAAGAAAGAGTTCATCATTGGTGTATCAACTGTAGCAACTGCTCTTGTGCTA
AGCATTAGTACCTCTTTTATTCTCATCACTTTTCATATACATATTGATCCATTAGTAGCT
GAATCACTCCCTGTAGTAGCTACCATGTCTTCTGTACTCGGATTCCCAGTCATCGCTCAC
TATCTCACCGAGCTTAGGATGGTCAATTCTGATTTTGGAAGGATGGCACTCTCTTGTTCC
CTTGTTAGTAATATGTTTGGGTTTTTAATCATAGCTATTACCAGCCTCTCAAGTCAACCA
TCCGTCGAGAAATTCATGTTTCTACAAAGTATTACTTCTGGTATAGGCTTTACCATGTTT
GTATTTCTTGTTGTGAGACCTCTAGTCATATGGAGCACGCGAAGAAATCCACCAGGAGAG
CCATTGAAACAAAGTTTCATTTGTATGGTATTTATTGGGGTCTTGCTTTCTGGATTTTGC
AGCAAGGCTTTAGGACTAAACCTCTTCTACGGGCCACTAGTTTACGGTCTAGCCATACCT
GCTGGACCACCACTAGGCTCTGCCCTCGTCGAGAAGCTTCAATTCATTGTTTCATGGCTC
TTTATGCCTATCTACTTTGTCAAAACAGGTTTGGTTACTGACATATTTTCTGTCAAACTG
AAGAATTATTTGGTTCTGCAATCGATTATTCTCGTTGCTTGTTTGGGGAAATTCCTTGGA
GCACTTATCTCTTCAATCTACAACCAAGTTTCCCTCCGAGATGCAATCTCAATTGGCCTC
GTATCCAATGTTCAAGGTGTTCTAGAGCTAGGCATGTTTAAAATGATGAAGCAAAATGAG
GCAATAGCGGATGAAGCTTTTGTTGTGTTGTGCATATCCCTGTTAATTGCAACTGCAATC
GTGACACCGATACTGAAGTCCCTGTATGATCCACATAAAAGATATGCAGCACACAAGAAC
AAGAATATCCAGCATATGAAGCCCCACTCTGAGCTTCGGGTGCTTGCATGTATACATGAT
CAAGAAAATGTTCCTTCCACAATAAACTTGTTGGAAGCACTTCACCCGTCAAACCAAAGC
CATATGGATATCGCGGTGCTTCATTTAATAGAGATGGTTGGTCGTGCACATCCTCTTCTC
ATAAACCACAAACTCCCATTAATGATGAAGCACACAAACGAGGCGTCAGCTTCAAAAAGA
ATCATCAATGCTTTTAAAGTGTTTGAGAAGAACTTCTGTGAGACAGTAACCATGCATCCT
TTTACAGGTATATCTCCTTATGTAATGATGCATGATGAAGTTTGCACAATGGCGCTTGAA
AGGAGGGCATCTCTCGTAATGATTCCTTTCCACAAGAGGTTAACAAGTAGTACTTCTTCT
TCTGTGAATCAGAAGAGGGCATCGAAGATGGGGATTAAGACTATGAATGACAAGATCCTT
CAGACAACACCTTGTTCAGTTGCAATAATTGTAGACAGATCACTTGTCAACACATCAAGG
CCAATACTAGACGCGTGGTCATTGTACCGTGTTGGTGTACTATTCTTGGGAGGACCAGAT
GATAGGGAAGCACTAGCTCTGGGAGAGCGTATGGCTGGAAAACAGAACATTAGCCTGACA
ATAGTGCGGTTAGTACTCCTTCATGAAAGTGGTAATTACAGCAATAACAACACAAGTAGT
AGCGATTATGAGACGATACAGAAGATGATGGACAATGAAATGTTAAGTGAAGCAAGGAGC
GATATGGCAGGAAATTATCGTGTCAAGTATGTGGAGAAGTTGATAAGAGATGGAACAGGT
ACAGCTGCTGTTATGCGATCCATGGAAGACGAATACGAACTAATCATTGTTGGGAGACGT
CATGACTCACAATCTCCTCTATTACTTGGTCTTTCTGATTGGGTTGAAGAGTCTGAATTA
GGCCCTGTAGGAGACATGTTTGCTTTAGCAGATTCACAAAGTAATTCCACAATATTAGTT
GTGCAACAACACAATGGAGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400012917
PEP Infomation

pacid=37454554 transcript=PGSC0003DMT400018809 locus=PGSC0003DMG400007292 ID=PGSC0003DMT400018809.v4.03 annot-version=v4.03
Sequence

MGSHMMEPDDLATYAKIFRHGQNDSSICMSIGKIQSKGSILFHNTNPLDYSVPLLLSQLS
LASLFILFTSTVFKPLGQPSNVIQIFGGLLLGPSFLGRIDGFIQLFYPYRSLVVIDAVAL
FGYMFFFFLIGVQIDPWILKRVEKKEFIIGVSTVATALVLSISTSFILITFHIHIDPLVA
ESLPVVATMSSVLGFPVIAHYLTELRMVNSDFGRMALSCSLVSNMFGFLIIAITSLSSQP
SVEKFMFLQSITSGIGFTMFVFLVVRPLVIWSTRRNPPGEPLKQSFICMVFIGVLLSGFC
SKALGLNLFYGPLVYGLAIPAGPPLGSALVEKLQFIVSWLFMPIYFVKTGLVTDIFSVKL
KNYLVLQSIILVACLGKFLGALISSIYNQVSLRDAISIGLVSNVQGVLELGMFKMMKQNE
AIADEAFVVLCISLLIATAIVTPILKSLYDPHKRYAAHKNKNIQHMKPHSELRVLACIHD
QENVPSTINLLEALHPSNQSHMDIAVLHLIEMVGRAHPLLINHKLPLMMKHTNEASASKR
IINAFKVFEKNFCETVTMHPFTGISPYVMMHDEVCTMALERRASLVMIPFHKRLTSSTSS
SVNQKRASKMGIKTMNDKILQTTPCSVAIIVDRSLVNTSRPILDAWSLYRVGVLFLGGPD
DREALALGERMAGKQNISLTIVRLVLLHESGNYSNNNTSSSDYETIQKMMDNEMLSEARS
DMAGNYRVKYVEKLIRDGTGTAAVMRSMEDEYELIIVGRRHDSQSPLLLGLSDWVEESEL
GPVGDMFALADSQSNSTILVVQQHNGG*

Transcript Sequence

Transcript ID

PGSC0003DMT400018809
Transcript Infomation

pacid=37454554 locus=PGSC0003DMG400007292 ID=PGSC0003DMT400018809.v4.03 annot-version=v4.03
Sequence

ATGGGTTCACACATGATGGAACCAGATGACTTAGCAACGTATGCTAAAATATTTAGACAT
GGACAAAATGATTCATCAATTTGCATGTCAATTGGCAAAATTCAATCCAAAGGTTCCATC
TTATTCCATAACACGAACCCATTAGATTACTCTGTTCCTCTCCTACTCTCTCAGCTCTCC
TTGGCTTCCCTCTTCATTCTTTTCACTTCTACCGTCTTCAAACCCCTCGGTCAACCATCT
AATGTCATTCAAATTTTTGGTGGCTTACTACTAGGTCCGTCCTTTCTAGGACGAATTGAT
GGATTCATACAGCTTTTCTATCCTTACAGAAGTCTGGTAGTTATCGATGCTGTTGCATTA
TTTGGTTATATGTTCTTCTTCTTCTTGATTGGAGTGCAAATAGATCCTTGGATTCTCAAG
AGAGTTGAGAAGAAAGAGTTCATCATTGGTGTATCAACTGTAGCAACTGCTCTTGTGCTA
AGCATTAGTACCTCTTTTATTCTCATCACTTTTCATATACATATTGATCCATTAGTAGCT
GAATCACTCCCTGTAGTAGCTACCATGTCTTCTGTACTCGGATTCCCAGTCATCGCTCAC
TATCTCACCGAGCTTAGGATGGTCAATTCTGATTTTGGAAGGATGGCACTCTCTTGTTCC
CTTGTTAGTAATATGTTTGGGTTTTTAATCATAGCTATTACCAGCCTCTCAAGTCAACCA
TCCGTCGAGAAATTCATGTTTCTACAAAGTATTACTTCTGGTATAGGCTTTACCATGTTT
GTATTTCTTGTTGTGAGACCTCTAGTCATATGGAGCACGCGAAGAAATCCACCAGGAGAG
CCATTGAAACAAAGTTTCATTTGTATGGTATTTATTGGGGTCTTGCTTTCTGGATTTTGC
AGCAAGGCTTTAGGACTAAACCTCTTCTACGGGCCACTAGTTTACGGTCTAGCCATACCT
GCTGGACCACCACTAGGCTCTGCCCTCGTCGAGAAGCTTCAATTCATTGTTTCATGGCTC
TTTATGCCTATCTACTTTGTCAAAACAGGTTTGGTTACTGACATATTTTCTGTCAAACTG
AAGAATTATTTGGTTCTGCAATCGATTATTCTCGTTGCTTGTTTGGGGAAATTCCTTGGA
GCACTTATCTCTTCAATCTACAACCAAGTTTCCCTCCGAGATGCAATCTCAATTGGCCTC
GTATCCAATGTTCAAGGTGTTCTAGAGCTAGGCATGTTTAAAATGATGAAGCAAAATGAG
GCAATAGCGGATGAAGCTTTTGTTGTGTTGTGCATATCCCTGTTAATTGCAACTGCAATC
GTGACACCGATACTGAAGTCCCTGTATGATCCACATAAAAGATATGCAGCACACAAGAAC
AAGAATATCCAGCATATGAAGCCCCACTCTGAGCTTCGGGTGCTTGCATGTATACATGAT
CAAGAAAATGTTCCTTCCACAATAAACTTGTTGGAAGCACTTCACCCGTCAAACCAAAGC
CATATGGATATCGCGGTGCTTCATTTAATAGAGATGGTTGGTCGTGCACATCCTCTTCTC
ATAAACCACAAACTCCCATTAATGATGAAGCACACAAACGAGGCGTCAGCTTCAAAAAGA
ATCATCAATGCTTTTAAAGTGTTTGAGAAGAACTTCTGTGAGACAGTAACCATGCATCCT
TTTACAGGTATATCTCCTTATGTAATGATGCATGATGAAGTTTGCACAATGGCGCTTGAA
AGGAGGGCATCTCTCGTAATGATTCCTTTCCACAAGAGGTTAACAAGTAGTACTTCTTCT
TCTGTGAATCAGAAGAGGGCATCGAAGATGGGGATTAAGACTATGAATGACAAGATCCTT
CAGACAACACCTTGTTCAGTTGCAATAATTGTAGACAGATCACTTGTCAACACATCAAGG
CCAATACTAGACGCGTGGTCATTGTACCGTGTTGGTGTACTATTCTTGGGAGGACCAGAT
GATAGGGAAGCACTAGCTCTGGGAGAGCGTATGGCTGGAAAACAGAACATTAGCCTGACA
ATAGTGCGGTTAGTACTCCTTCATGAAAGTGGTAATTACAGCAATAACAACACAAGTAGT
AGCGATTATGAGACGATACAGAAGATGATGGACAATGAAATGTTAAGTGAAGCAAGGAGC
GATATGGCAGGAAATTATCGTGTCAAGTATGTGGAGAAGTTGATAAGAGATGGAACAGGT
ACAGCTGCTGTTATGCGATCCATGGAAGACGAATACGAACTAATCATTGTTGGGAGACGT
CATGACTCACAATCTCCTCTATTACTTGGTCTTTCTGATTGGGTTGAAGAGTCTGAATTA
GGCCCTGTAGGAGACATGTTTGCTTTAGCAGATTCACAAAGTAATTCCACAATATTAGTT
GTGCAACAACACAATGGAGGATGA