Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018803
CDS Infomation

pacid=37450817 polypeptide=PGSC0003DMP400012912 locus=PGSC0003DMG400007289 ID=PGSC0003DMT400018803.v4.03 annot-version=v4.03
Sequence

ATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTC
GATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTGGAGATACGGAAGAATAAA
AGAGAAGAGAGTTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCT
AGCACTGCTGCTGTTTCTCACCTCGATAAGAAGCTGGAGACTCTTCCTGAATTGATTGCT
GGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGCACAACACAGTTCCGGAAACTG
CTTTCAATTGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGC
TTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGTTTGAGGCAGCGTGGGCT
CTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTGCT
GTTCCAATTTTCATCAGACTTCTAAGTTCACCAAGCGATGATGTCCGTGAACAGGCAGTT
TGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCAT
GGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGA
AATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCGCAGTTTGAGCAG
ACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTG
ACAGATGCATGCTGGGCTCTTTCGTATCTTTCTGATGGAACTAATGACAAAATCCAGGCT
GTTATTGAAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012912
PEP Infomation

pacid=37450817 transcript=PGSC0003DMT400018803 locus=PGSC0003DMG400007289 ID=PGSC0003DMT400018803.v4.03 annot-version=v4.03
Sequence

MSLRPNSRTEARRSRYKVAVDAEEGRRRREDNMVEIRKNKREESLLKKRREGLLQAQQFP
STAAVSHLDKKLETLPELIAGVWSDDSSLQLECTTQFRKLLSIERNPPIEEVIQSGVVPR
FVEFLARDDYPQLQFEAAWALTNIASGTSENTKVVIDYGAVPIFIRLLSSPSDDVREQAV
WALGNIAGDSPKYRDLVLGHGALVALLAQFNEQAKLSMLRNATWTLSNFCRGKPQPQFEQ
TKAALPTLGRLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCSRLVELLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400018803
Transcript Infomation

pacid=37450817 locus=PGSC0003DMG400007289 ID=PGSC0003DMT400018803.v4.03 annot-version=v4.03
Sequence

ATGTCACTGAGGCCGAACTCGAGAACGGAGGCTCGCCGGAGCAGGTACAAAGTTGCCGTC
GATGCGGAGGAAGGACGGAGAAGAAGGGAAGATAACATGGTGGAGATACGGAAGAATAAA
AGAGAAGAGAGTTTGCTTAAGAAGCGTCGTGAAGGTTTACTACAAGCTCAGCAGTTTCCT
AGCACTGCTGCTGTTTCTCACCTCGATAAGAAGCTGGAGACTCTTCCTGAATTGATTGCT
GGGGTTTGGTCTGATGACAGCAGTTTGCAACTTGAATGCACAACACAGTTCCGGAAACTG
CTTTCAATTGAACGCAATCCTCCTATAGAGGAAGTGATACAGTCTGGGGTAGTTCCTCGC
TTTGTTGAATTTCTTGCTCGAGATGACTATCCTCAACTGCAGTTTGAGGCAGCGTGGGCT
CTTACAAATATTGCATCTGGTACATCAGAAAACACTAAAGTTGTGATTGATTATGGTGCT
GTTCCAATTTTCATCAGACTTCTAAGTTCACCAAGCGATGATGTCCGTGAACAGGCAGTT
TGGGCTTTGGGAAATATTGCTGGTGACTCGCCCAAGTATCGTGACCTTGTGCTTGGCCAT
GGAGCTTTAGTGGCATTGCTGGCACAATTTAATGAGCAGGCAAAGCTATCTATGTTGAGA
AATGCTACCTGGACATTGTCAAACTTTTGTAGGGGAAAACCTCAGCCGCAGTTTGAGCAG
ACAAAAGCGGCACTCCCCACTCTTGGTCGCCTTATCCACTCAAATGATGAAGAAGTCTTG
ACAGATGCATGCTGGGCTCTTTCGTATCTTTCTGATGGAACTAATGACAAAATCCAGGCT
GTTATTGAAGCTGGAGTGTGTTCCCGCCTTGTTGAGCTGCTACTGTGA