Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018792
CDS Infomation

pacid=37450082 polypeptide=PGSC0003DMP400012907 locus=PGSC0003DMG400007285 ID=PGSC0003DMT400018792.v4.03 annot-version=v4.03
Sequence

ATGGATCAAATCCCAATCCCCACCATTGATTTCAGTGTTTTCCAGGGTGGTCACAATCAT
GTTCAAGAGTGTGGGAGAAATGAATTGATCAACAATGGCGCCGTAGATCCTTGGTTTGAA
TTGGACAGTGAGGATCTTGATTCTCTTTACACTGTATTTGACCTTAAATATCAAGATAAT
ACATCAGACAAACAAGTTCAGTCATTGGAAGATCAGCAACAAAGCATTTCAGATCACTGG
ACACAAAGTGATGATTCTTCCAACATGGACTTGCCCCTGCAGCCTATCCAAATTCAAACG
ACCCCCAAAGCATCTAATGGGATTCAGCCTCAGGAGCCAAGGCTTGACAATTTCCATGGA
GAGAAAACAAATTCCATTTCTTTAGCATCTTTGGAGCTCTTGAACAATTGTGGGAGATTG
TTCAAGAAACCAAGTGAGGAAAACTTGAGCAATGCATTACTCAGCAACGAGGCTCGTGTA
AGTAACATCCCTAAGTTGTCAACAGAAGAAATCTTACGAGTTGCTGGAGAAAGATATATC
CAGTACTCCACCCAAAGGGTAGATGGTCTTTCTATGTTTATACATCCGTATGCTTCATCA
CTTTCGGGCCTTTCCATAGAGCAAACAAAGGACATGGAACTTGTTCACCTCCTTCTAGCT
GCTGCAGAAGAAGTGGATCAGCAGCAATTTCATTTGGCTAGCCAATCTATTGCACACTGC
CTGTGGAAGGCATCTGCTACAGGTAATCCAATCCAGAGACTTTGTTTCTATTTTGGTGAA
GCTTTACAAGAAAGGATTGATCGAGAAATAAAAAGGTCCCCATGTTTTGAAAGAAAGTTA
GGGTTTTTAAGCAATCTGGCATTAGGTAATACACCTGAATCCTTAACATGCCATACAGAA
ATTCCCTTCAGTCAAGTAATGCAATTCGCGGGAAATCAAGCAATAGTTGAAAATGTTAAA
GGTGCAACCAAGATACATTTGGTTGACTTTAATATCAGAAGTGGAATTCAGTGTACAGGC
TTGATGCAAGCTCTTTCAGAACGACGTGACTGTCCAATTGAGCTTCTGAAGATAACAGCC
ATTGGACACCAAGAAAAAGAGAAAATCGAAGAAACAGGCAAGAGATTACAAAGTTTTGCC
AAATCCTTGAATCTTCCCTTTTCATTTGATATGGTCTTTATGTCTGACATGAAAGATCTC
AAGGCAGAATCAGTCAATGTTAAAGCAGATGAAACTGTAGCTGTCTATTGTTACACTGTA
CTAAGAACAATGATCTGCAGGCAAGATTATTTGGACAACACAATGCGAGTAATCAGAGGA
TTAAGACCATCTGTGGTTGTTGTCTGTGAAGTTGAAGCAAACCATAATTCACCTTCATTT
TTGAACCGTTTTGTGGAGGCACTTTTCTTTTATAGTGTGCTTTTTGATTGCTTTGAAGAC
TGCATGGATAGAGACAATTTGGTCAGAAAGAGGATTGAAGTATTTCACATTGGTGAAGGA
ATCCGGAATATGGTTGCAGCTGAGGGTGCAGAAAGGTTCACTCGGAATGTAAAGCTTGAT
GTATGGAGAGCATACTTTGTGAGGTTTGGAATGGTGGAAATGGAGCTCAGCGAGTCATCT
CGATATCAAGCAAATCTGATTCTCAAGCAATTTTCCCATGGCAGTTCCTGCATTGTTCAA
AATGATGGAAAGGCCCTCCTAGTTGGATGGAAGGGAACACCCATTGAATCTGTTTCTATT
TGGAAGTTTTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012907
PEP Infomation

pacid=37450082 transcript=PGSC0003DMT400018792 locus=PGSC0003DMG400007285 ID=PGSC0003DMT400018792.v4.03 annot-version=v4.03
Sequence

MDQIPIPTIDFSVFQGGHNHVQECGRNELINNGAVDPWFELDSEDLDSLYTVFDLKYQDN
TSDKQVQSLEDQQQSISDHWTQSDDSSNMDLPLQPIQIQTTPKASNGIQPQEPRLDNFHG
EKTNSISLASLELLNNCGRLFKKPSEENLSNALLSNEARVSNIPKLSTEEILRVAGERYI
QYSTQRVDGLSMFIHPYASSLSGLSIEQTKDMELVHLLLAAAEEVDQQQFHLASQSIAHC
LWKASATGNPIQRLCFYFGEALQERIDREIKRSPCFERKLGFLSNLALGNTPESLTCHTE
IPFSQVMQFAGNQAIVENVKGATKIHLVDFNIRSGIQCTGLMQALSERRDCPIELLKITA
IGHQEKEKIEETGKRLQSFAKSLNLPFSFDMVFMSDMKDLKAESVNVKADETVAVYCYTV
LRTMICRQDYLDNTMRVIRGLRPSVVVVCEVEANHNSPSFLNRFVEALFFYSVLFDCFED
CMDRDNLVRKRIEVFHIGEGIRNMVAAEGAERFTRNVKLDVWRAYFVRFGMVEMELSESS
RYQANLILKQFSHGSSCIVQNDGKALLVGWKGTPIESVSIWKFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400018792
Transcript Infomation

pacid=37450082 locus=PGSC0003DMG400007285 ID=PGSC0003DMT400018792.v4.03 annot-version=v4.03
Sequence

ATGGATCAAATCCCAATCCCCACCATTGATTTCAGTGTTTTCCAGGGTGGTCACAATCAT
GTTCAAGAGTGTGGGAGAAATGAATTGATCAACAATGGCGCCGTAGATCCTTGGTTTGAA
TTGGACAGTGAGGATCTTGATTCTCTTTACACTGTATTTGACCTTAAATATCAAGATAAT
ACATCAGACAAACAAGTTCAGTCATTGGAAGATCAGCAACAAAGCATTTCAGATCACTGG
ACACAAAGTGATGATTCTTCCAACATGGACTTGCCCCTGCAGCCTATCCAAATTCAAACG
ACCCCCAAAGCATCTAATGGGATTCAGCCTCAGGAGCCAAGGCTTGACAATTTCCATGGA
GAGAAAACAAATTCCATTTCTTTAGCATCTTTGGAGCTCTTGAACAATTGTGGGAGATTG
TTCAAGAAACCAAGTGAGGAAAACTTGAGCAATGCATTACTCAGCAACGAGGCTCGTGTA
AGTAACATCCCTAAGTTGTCAACAGAAGAAATCTTACGAGTTGCTGGAGAAAGATATATC
CAGTACTCCACCCAAAGGGTAGATGGTCTTTCTATGTTTATACATCCGTATGCTTCATCA
CTTTCGGGCCTTTCCATAGAGCAAACAAAGGACATGGAACTTGTTCACCTCCTTCTAGCT
GCTGCAGAAGAAGTGGATCAGCAGCAATTTCATTTGGCTAGCCAATCTATTGCACACTGC
CTGTGGAAGGCATCTGCTACAGGTAATCCAATCCAGAGACTTTGTTTCTATTTTGGTGAA
GCTTTACAAGAAAGGATTGATCGAGAAATAAAAAGGTCCCCATGTTTTGAAAGAAAGTTA
GGGTTTTTAAGCAATCTGGCATTAGGTAATACACCTGAATCCTTAACATGCCATACAGAA
ATTCCCTTCAGTCAAGTAATGCAATTCGCGGGAAATCAAGCAATAGTTGAAAATGTTAAA
GGTGCAACCAAGATACATTTGGTTGACTTTAATATCAGAAGTGGAATTCAGTGTACAGGC
TTGATGCAAGCTCTTTCAGAACGACGTGACTGTCCAATTGAGCTTCTGAAGATAACAGCC
ATTGGACACCAAGAAAAAGAGAAAATCGAAGAAACAGGCAAGAGATTACAAAGTTTTGCC
AAATCCTTGAATCTTCCCTTTTCATTTGATATGGTCTTTATGTCTGACATGAAAGATCTC
AAGGCAGAATCAGTCAATGTTAAAGCAGATGAAACTGTAGCTGTCTATTGTTACACTGTA
CTAAGAACAATGATCTGCAGGCAAGATTATTTGGACAACACAATGCGAGTAATCAGAGGA
TTAAGACCATCTGTGGTTGTTGTCTGTGAAGTTGAAGCAAACCATAATTCACCTTCATTT
TTGAACCGTTTTGTGGAGGCACTTTTCTTTTATAGTGTGCTTTTTGATTGCTTTGAAGAC
TGCATGGATAGAGACAATTTGGTCAGAAAGAGGATTGAAGTATTTCACATTGGTGAAGGA
ATCCGGAATATGGTTGCAGCTGAGGGTGCAGAAAGGTTCACTCGGAATGTAAAGCTTGAT
GTATGGAGAGCATACTTTGTGAGGTTTGGAATGGTGGAAATGGAGCTCAGCGAGTCATCT
CGATATCAAGCAAATCTGATTCTCAAGCAATTTTCCCATGGCAGTTCCTGCATTGTTCAA
AATGATGGAAAGGCCCTCCTAGTTGGATGGAAGGGAACACCCATTGAATCTGTTTCTATT
TGGAAGTTTTTGTAA