Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018788
CDS Infomation

pacid=37454210 polypeptide=PGSC0003DMP400012905 locus=PGSC0003DMG400007283 ID=PGSC0003DMT400018788.v4.03 annot-version=v4.03
Sequence

ATGGATGACAGTGATGGTAGTCGATGCAAAGGGCTCATTTCTACTGTTAGAAAGAAAAGA
AGCCAGACGCTGCGGCGACCTAGGACAGAGAATTTGACAGTTCCTGCATGCCATGTTCAC
TCACCCCAGACATCACTTTCAGATAGTGCCTCTAGCGATGAGTATAGTGATGATGCTAAT
GCAGGAGGGAGAATCGACAACCTCAATTACTCTATATCTAGAGATTCTTCTGCTAACAGG
TTCAAAGGTGATTATTCTTCTAAAAAGAACAAGGAGGATGAGGGATCTAGAGCGACATAT
GATAATGCATGTGCAGGAGATGATACGAATCCCAGGCATGGTGCGTCTGTTAGGCAGTTG
GGGAATGTTAGGGACGGTGTAGCTAATGATAGCAAGCTGGAAAAGTTGAAGCTGAAAATT
GGTGGAGCGACTGGCATTATTCAAACCAAAAACAGTTCTTATGGATCATCTGGCAGTTTA
TTGTCTTCTAAAAGTGCACAACCCTCTGATGCCTCTCAGCCTCGGCAGAATCTCACTCCT
CAGGACAATTCAACTGAAGACGGTCCTCTTGCAGATAAGAAAAGTAGGTCGAAAGGAATT
TCGTGCAAGGGTTTCCCAGGAGGCACTTTTGGTGCTAGCAAAAGCAATATGAAGAAGATG
CCAATGAAGAATGTCATTAAAAAACAAGGAGACCAGCCACATCAAAATCGTAAGGTCCAC
AGGCGAAGGAGGCTTATTTTGGATGAGCTTGATGAGGAGGATGAGATTCACTACTTGGAG
AAGCGTAATGTGGGGGAAGAACTAACTAAGACAAGAAGTCTTTCCGGGGGTTTGAAGGTC
GATAAGTATGAAATGTTGGAAGATGTTGGAAGGTCAGGCAAAGAAGTTAAAAGAATATCA
AATCAAGGTTCTGAGTATACTGATTATGAGGAGGAAGAACTATTGTCTGATGGAGAGGCC
AAGCGGACAAAGAAGAAGGATAAACAAATGGAGTCCTATGAGACACCGGTTGAAACAAAG
AGTGAAATAAGTCTTACAACCCGTCCACGACAACAGGCTCTTCTGTCTGGCAAAGAAGTT
AACAGAAAATTAAATCGAGGTTCTGAGGATCCTGATTATGAGAAGGAAGAACTATTGTCT
GATGGAGAGGCCAAGCGGACAAAGAAGAAGGAGAAGCAAATGAAGGAGTCCTATGAGACA
TCGGTTGAAACAAAGAGTGAAATAAGTCTTACAACCCGTCCACGACAACAGGCTCTTCTG
TCTGGCAAAGAAGCTAACAGAAAATTAAATCGAGGTTCTGAGGATCCTGATTATGAGAAG
GAAGAACTATTGTCTGATGGAGAGGCCAAGCGGACAAAGAAGAAGGAGAAGCAAATGAAG
GAGTCCTATGAGACATCGGTTGAAACAAAGAGTGAAATAAGTCTTACAACACGACAACGG
GCTCTTCTATCAAGAAGGGATTCATCTGCTACTTCTGTGAATCAGATTGGGTATCCCTAC
GGTTGTCCTCCAGCACCACCTCAAAAACAAAAGGAGAAGCTCTCAGATGTTGAGCAGCAA
CTGAAAAGAGTAAAGGCTGCTCAGAAACGTAGAATACGATATGAGGAGGTAGCTCGGGAA
TCAGAGGCTGAGGCAATAAGAAAAATACTAGGTCAAGATTCCAACAAGAAGAAGCAAGAG
AAAATAAAGAAGCAGCAGGAAGAGTTGGCACAGGAGAAGGCTGCCAAAGAGCTTGCTCCA
AACACTATCAGAACAGTTATGGGCCCAACTGGAACTGTTGTTACATTCCCTCATGATATG
GGTTTGCCAAGTATTTTTGACTCTAAGCCTTGCAGTTATCCTCCCCCTCGTGAAAAATGT
GCTGGTCCTTCCTGTGTGAACCCATCCAATTACCGGGATCTGAAGTCAAACCTTCGTCTT
TGCAGTCTTAAGTGCTACAAGGCAATTCATGAAAAGATGAAGGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012905
PEP Infomation

pacid=37454210 transcript=PGSC0003DMT400018788 locus=PGSC0003DMG400007283 ID=PGSC0003DMT400018788.v4.03 annot-version=v4.03
Sequence

MDDSDGSRCKGLISTVRKKRSQTLRRPRTENLTVPACHVHSPQTSLSDSASSDEYSDDAN
AGGRIDNLNYSISRDSSANRFKGDYSSKKNKEDEGSRATYDNACAGDDTNPRHGASVRQL
GNVRDGVANDSKLEKLKLKIGGATGIIQTKNSSYGSSGSLLSSKSAQPSDASQPRQNLTP
QDNSTEDGPLADKKSRSKGISCKGFPGGTFGASKSNMKKMPMKNVIKKQGDQPHQNRKVH
RRRRLILDELDEEDEIHYLEKRNVGEELTKTRSLSGGLKVDKYEMLEDVGRSGKEVKRIS
NQGSEYTDYEEEELLSDGEAKRTKKKDKQMESYETPVETKSEISLTTRPRQQALLSGKEV
NRKLNRGSEDPDYEKEELLSDGEAKRTKKKEKQMKESYETSVETKSEISLTTRPRQQALL
SGKEANRKLNRGSEDPDYEKEELLSDGEAKRTKKKEKQMKESYETSVETKSEISLTTRQR
ALLSRRDSSATSVNQIGYPYGCPPAPPQKQKEKLSDVEQQLKRVKAAQKRRIRYEEVARE
SEAEAIRKILGQDSNKKKQEKIKKQQEELAQEKAAKELAPNTIRTVMGPTGTVVTFPHDM
GLPSIFDSKPCSYPPPREKCAGPSCVNPSNYRDLKSNLRLCSLKCYKAIHEKMKD*

Transcript Sequence

Transcript ID

PGSC0003DMT400018788
Transcript Infomation

pacid=37454210 locus=PGSC0003DMG400007283 ID=PGSC0003DMT400018788.v4.03 annot-version=v4.03
Sequence

ATGGATGACAGTGATGGTAGTCGATGCAAAGGGCTCATTTCTACTGTTAGAAAGAAAAGA
AGCCAGACGCTGCGGCGACCTAGGACAGAGAATTTGACAGTTCCTGCATGCCATGTTCAC
TCACCCCAGACATCACTTTCAGATAGTGCCTCTAGCGATGAGTATAGTGATGATGCTAAT
GCAGGAGGGAGAATCGACAACCTCAATTACTCTATATCTAGAGATTCTTCTGCTAACAGG
TTCAAAGGTGATTATTCTTCTAAAAAGAACAAGGAGGATGAGGGATCTAGAGCGACATAT
GATAATGCATGTGCAGGAGATGATACGAATCCCAGGCATGGTGCGTCTGTTAGGCAGTTG
GGGAATGTTAGGGACGGTGTAGCTAATGATAGCAAGCTGGAAAAGTTGAAGCTGAAAATT
GGTGGAGCGACTGGCATTATTCAAACCAAAAACAGTTCTTATGGATCATCTGGCAGTTTA
TTGTCTTCTAAAAGTGCACAACCCTCTGATGCCTCTCAGCCTCGGCAGAATCTCACTCCT
CAGGACAATTCAACTGAAGACGGTCCTCTTGCAGATAAGAAAAGTAGGTCGAAAGGAATT
TCGTGCAAGGGTTTCCCAGGAGGCACTTTTGGTGCTAGCAAAAGCAATATGAAGAAGATG
CCAATGAAGAATGTCATTAAAAAACAAGGAGACCAGCCACATCAAAATCGTAAGGTCCAC
AGGCGAAGGAGGCTTATTTTGGATGAGCTTGATGAGGAGGATGAGATTCACTACTTGGAG
AAGCGTAATGTGGGGGAAGAACTAACTAAGACAAGAAGTCTTTCCGGGGGTTTGAAGGTC
GATAAGTATGAAATGTTGGAAGATGTTGGAAGGTCAGGCAAAGAAGTTAAAAGAATATCA
AATCAAGGTTCTGAGTATACTGATTATGAGGAGGAAGAACTATTGTCTGATGGAGAGGCC
AAGCGGACAAAGAAGAAGGATAAACAAATGGAGTCCTATGAGACACCGGTTGAAACAAAG
AGTGAAATAAGTCTTACAACCCGTCCACGACAACAGGCTCTTCTGTCTGGCAAAGAAGTT
AACAGAAAATTAAATCGAGGTTCTGAGGATCCTGATTATGAGAAGGAAGAACTATTGTCT
GATGGAGAGGCCAAGCGGACAAAGAAGAAGGAGAAGCAAATGAAGGAGTCCTATGAGACA
TCGGTTGAAACAAAGAGTGAAATAAGTCTTACAACCCGTCCACGACAACAGGCTCTTCTG
TCTGGCAAAGAAGCTAACAGAAAATTAAATCGAGGTTCTGAGGATCCTGATTATGAGAAG
GAAGAACTATTGTCTGATGGAGAGGCCAAGCGGACAAAGAAGAAGGAGAAGCAAATGAAG
GAGTCCTATGAGACATCGGTTGAAACAAAGAGTGAAATAAGTCTTACAACACGACAACGG
GCTCTTCTATCAAGAAGGGATTCATCTGCTACTTCTGTGAATCAGATTGGGTATCCCTAC
GGTTGTCCTCCAGCACCACCTCAAAAACAAAAGGAGAAGCTCTCAGATGTTGAGCAGCAA
CTGAAAAGAGTAAAGGCTGCTCAGAAACGTAGAATACGATATGAGGAGGTAGCTCGGGAA
TCAGAGGCTGAGGCAATAAGAAAAATACTAGGTCAAGATTCCAACAAGAAGAAGCAAGAG
AAAATAAAGAAGCAGCAGGAAGAGTTGGCACAGGAGAAGGCTGCCAAAGAGCTTGCTCCA
AACACTATCAGAACAGTTATGGGCCCAACTGGAACTGTTGTTACATTCCCTCATGATATG
GGTTTGCCAAGTATTTTTGACTCTAAGCCTTGCAGTTATCCTCCCCCTCGTGAAAAATGT
GCTGGTCCTTCCTGTGTGAACCCATCCAATTACCGGGATCTGAAGTCAAACCTTCGTCTT
TGCAGTCTTAAGTGCTACAAGGCAATTCATGAAAAGATGAAGGATTAA