Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018689
CDS Infomation

pacid=37443308 polypeptide=PGSC0003DMP400012842 locus=PGSC0003DMG400007239 ID=PGSC0003DMT400018689.v4.03 annot-version=v4.03
Sequence

ATGCAGAAGTTGATTCTTGATGGGCAGGAGAACACTAGTGATCATCATGAGTCTGATGAA
AATCACCAAAATCATGATCAATGTATTGTTGTCCCAACTATGCTCAATGCAATTGCTGAT
GGCTTTATCAAGAAAGAAAAGTCATGGTTTGCCACTTCTCAGCTTCCAAGTGATTTATCA
ATTCGAGTTGAAGACATCACATTCTATGTTCACAAGTATCCACTTATTGCAAGGTGTGGC
TACTTGAATCAAATTGAACTTCATGAGCCTCAAAATTCACATTTAGGATATGATATCAAG
CTTGAAAAGTTTCCTGGTGGATCAGAAACTTTTGAGACAATTCTAAAATTCTGTTATGGC
TTGCCAATAAGTCTAAATCCAGCAAATGTAGCAGCATTGAGATGTGGATCAGAGTTTTTA
GAGATGACAGAAGCAATGGAAGAAGGGAATTTGATCTCGAAAACGGAAGCTTTCTTCACA
TTTGTAGTCCTTTCGTCGTGGAATGACACAATCATGGTCATCAAATCATGTGAAATGCTA
TCTCCATGGGCTGAAAATTTACAGATTGTGAGAAGGTGTTGTGACTCAATTGCCTGGAAG
ATATTTAGAGAGAATTCAACAGCAGGGGAGATCATAACGAACAAACGAACTTGGTGGTTC
GATGATGTTGCCACTCTCCGTATTGATTTCTTCATGAGGATCATTACAGCAGTGAAGGTA
AAAGGGATCAAACCTGAGATCATTGGTTCGTGTATTATGAACTACGGAGAGAAATGTTTG
CCTAGCATGTATGGCGATACGAGAGGAATGGATTGTAAAATTGGTACTAATAGAAGGAAC
GATTCGCAATGGAGCATCACGAGTGGGAGGATCAAGGAAACGAGCATTGGACAGAATAAG
GAACAGAGAACAATTATAGAGAGCTTGATCAGTATATTACCTCCTCAGAAGGAAACTGTT
TCTTGCAAGTTTCTTTTAAGGTTGTTGAAGATGTCAATTGTGTATGCTGCATCACCAGCT
TTGATTTCCGAGCTCGAGAAAAGAATCGGGATGGTGCTCGAAAACGCCAGCACGAACGAC
CTCTTGATACCTACATATGCAGTAGGTGAACAAACAATCAATTCAAATGAAGAACAGACT
ATCCATAACATAGATGTGGTGCAGAGGATTTTGGATTATTTCCTGATGTATGAACAGCAA
AAATTGCAGCAACAAGAACTGAAGTCGACGACATTGAATATCAGTAAACTGTTTGACAGC
TACCTAGTGGAAATCGCGAGAGATCCCAATGTATCTATCACTAAGTTCCGAGTTTTAGCT
GAATCATTGCCTCGACATGTTCGAACATGTCATGATGGACTCTACAGAGCTATTGATACA
TACCTTAAGACTCATCCTTCACTGTCTGAACATGATCGACGAAGGCTATGCAAGATCATG
GACTGCGGAAAATTGTCACTTGATGGATGCATGCACGCTGCACAAAACGAAAGGTTGCCT
ATGAGAATCATTATCCAGGTTTTGCTGTCGGAGCAAGTGAAGATGAGGGCTGCAGTACAT
GGTAAGGATATTACAGAGAGTGATGATAACTCAGACAAGGAAAATAGCTGGTCATCAACG
AAGAACGAGGTCAAGTCCCTTAGAGAAGAACTCGAAAATGTGAAGATTCAAATGGCTGAG
CTTCATAGGGACTACTCTGAGCTGCAACAAGAATACGAAAAGACGAACAACAAGCACAGA
AGTCCGTGGACATTGGGATGGAGGAAGATGAAAAAGTCTGCACTTTTCATTAGAAAAATG
ATCGAGGATGAAACTCAAGAGGGAGAGCATAGAGTTAAACCAGGCCGAAGAACACAATCC
ATATCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012842
PEP Infomation

pacid=37443308 transcript=PGSC0003DMT400018689 locus=PGSC0003DMG400007239 ID=PGSC0003DMT400018689.v4.03 annot-version=v4.03
Sequence

MQKLILDGQENTSDHHESDENHQNHDQCIVVPTMLNAIADGFIKKEKSWFATSQLPSDLS
IRVEDITFYVHKYPLIARCGYLNQIELHEPQNSHLGYDIKLEKFPGGSETFETILKFCYG
LPISLNPANVAALRCGSEFLEMTEAMEEGNLISKTEAFFTFVVLSSWNDTIMVIKSCEML
SPWAENLQIVRRCCDSIAWKIFRENSTAGEIITNKRTWWFDDVATLRIDFFMRIITAVKV
KGIKPEIIGSCIMNYGEKCLPSMYGDTRGMDCKIGTNRRNDSQWSITSGRIKETSIGQNK
EQRTIIESLISILPPQKETVSCKFLLRLLKMSIVYAASPALISELEKRIGMVLENASTND
LLIPTYAVGEQTINSNEEQTIHNIDVVQRILDYFLMYEQQKLQQQELKSTTLNISKLFDS
YLVEIARDPNVSITKFRVLAESLPRHVRTCHDGLYRAIDTYLKTHPSLSEHDRRRLCKIM
DCGKLSLDGCMHAAQNERLPMRIIIQVLLSEQVKMRAAVHGKDITESDDNSDKENSWSST
KNEVKSLREELENVKIQMAELHRDYSELQQEYEKTNNKHRSPWTLGWRKMKKSALFIRKM
IEDETQEGEHRVKPGRRTQSIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400018689
Transcript Infomation

pacid=37443308 locus=PGSC0003DMG400007239 ID=PGSC0003DMT400018689.v4.03 annot-version=v4.03
Sequence

ATGCAGAAGTTGATTCTTGATGGGCAGGAGAACACTAGTGATCATCATGAGTCTGATGAA
AATCACCAAAATCATGATCAATGTATTGTTGTCCCAACTATGCTCAATGCAATTGCTGAT
GGCTTTATCAAGAAAGAAAAGTCATGGTTTGCCACTTCTCAGCTTCCAAGTGATTTATCA
ATTCGAGTTGAAGACATCACATTCTATGTTCACAAGTATCCACTTATTGCAAGGTGTGGC
TACTTGAATCAAATTGAACTTCATGAGCCTCAAAATTCACATTTAGGATATGATATCAAG
CTTGAAAAGTTTCCTGGTGGATCAGAAACTTTTGAGACAATTCTAAAATTCTGTTATGGC
TTGCCAATAAGTCTAAATCCAGCAAATGTAGCAGCATTGAGATGTGGATCAGAGTTTTTA
GAGATGACAGAAGCAATGGAAGAAGGGAATTTGATCTCGAAAACGGAAGCTTTCTTCACA
TTTGTAGTCCTTTCGTCGTGGAATGACACAATCATGGTCATCAAATCATGTGAAATGCTA
TCTCCATGGGCTGAAAATTTACAGATTGTGAGAAGGTGTTGTGACTCAATTGCCTGGAAG
ATATTTAGAGAGAATTCAACAGCAGGGGAGATCATAACGAACAAACGAACTTGGTGGTTC
GATGATGTTGCCACTCTCCGTATTGATTTCTTCATGAGGATCATTACAGCAGTGAAGGTA
AAAGGGATCAAACCTGAGATCATTGGTTCGTGTATTATGAACTACGGAGAGAAATGTTTG
CCTAGCATGTATGGCGATACGAGAGGAATGGATTGTAAAATTGGTACTAATAGAAGGAAC
GATTCGCAATGGAGCATCACGAGTGGGAGGATCAAGGAAACGAGCATTGGACAGAATAAG
GAACAGAGAACAATTATAGAGAGCTTGATCAGTATATTACCTCCTCAGAAGGAAACTGTT
TCTTGCAAGTTTCTTTTAAGGTTGTTGAAGATGTCAATTGTGTATGCTGCATCACCAGCT
TTGATTTCCGAGCTCGAGAAAAGAATCGGGATGGTGCTCGAAAACGCCAGCACGAACGAC
CTCTTGATACCTACATATGCAGTAGGTGAACAAACAATCAATTCAAATGAAGAACAGACT
ATCCATAACATAGATGTGGTGCAGAGGATTTTGGATTATTTCCTGATGTATGAACAGCAA
AAATTGCAGCAACAAGAACTGAAGTCGACGACATTGAATATCAGTAAACTGTTTGACAGC
TACCTAGTGGAAATCGCGAGAGATCCCAATGTATCTATCACTAAGTTCCGAGTTTTAGCT
GAATCATTGCCTCGACATGTTCGAACATGTCATGATGGACTCTACAGAGCTATTGATACA
TACCTTAAGACTCATCCTTCACTGTCTGAACATGATCGACGAAGGCTATGCAAGATCATG
GACTGCGGAAAATTGTCACTTGATGGATGCATGCACGCTGCACAAAACGAAAGGTTGCCT
ATGAGAATCATTATCCAGGTTTTGCTGTCGGAGCAAGTGAAGATGAGGGCTGCAGTACAT
GGTAAGGATATTACAGAGAGTGATGATAACTCAGACAAGGAAAATAGCTGGTCATCAACG
AAGAACGAGGTCAAGTCCCTTAGAGAAGAACTCGAAAATGTGAAGATTCAAATGGCTGAG
CTTCATAGGGACTACTCTGAGCTGCAACAAGAATACGAAAAGACGAACAACAAGCACAGA
AGTCCGTGGACATTGGGATGGAGGAAGATGAAAAAGTCTGCACTTTTCATTAGAAAAATG
ATCGAGGATGAAACTCAAGAGGGAGAGCATAGAGTTAAACCAGGCCGAAGAACACAATCC
ATATCTTAA