Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018684
CDS Infomation

pacid=37445432 polypeptide=PGSC0003DMP400012838 locus=PGSC0003DMG400007237 ID=PGSC0003DMT400018684.v4.03 annot-version=v4.03
Sequence

ATGGATTCCCAATCACACCCAGTTCAAGAACCATCACAAACCGTAAATTCATACGAGCAG
TACCAAAATTCTTCAGATTCGTACTATCAAAACCCTTCACAAACCCTAGGTCAAGATCCC
GCACCAGGTGTTTGTGAAAATGCCGAGCTGAACGGCTCAAATTCCAACTTTCGTGAAAAC
TCAGCTAAGCCAGGCGACAATAATTCAGCTCAAAACAAACTATCAGATTTGAATTCAAAT
CTTATGTTACAGAAGCCATTGTTGTCGGGTAATGGGTTGACTAACACTCATAGTGGTGGT
GCCGAGAGGGACCAATCAGGTGGTGAAGAAGAAACTTCCAGTAGAAGAAGGAGGAGAAGC
CGATGGGACCCACCCCCGACTGATTCGAGCAATGATGGCACTGGAGGAAATGATGGAACC
GGGGCTGGACGAAAGAGGAAATCGAGGTGGGCGGATGATGAGCCGAAGCCGGTGATTCAG
TTGCCTGATTTCATGAAGGATTTCGCTGGAGGTATTGAATTTGACCCTGAAGTACAAGCT
CTTAACAGTAGATTACTTGAAATTAGTAGGAAACTGCAATCTGGTATGCCTTTAGATGAT
AGACCTGAAGGAGCTCGATCCCCTTCGCCTGAACCTATATATGATAATATGGGTGTACGT
ATAAATACGAGGGAGTATCGTGCTCGAGAAAAACTAAATAGGGAAAGACAAGAGATTATA
TCACAGATAATAAAGAAAAATCCAGCTTTTAAGCCACCAGCAGATTATAGGCCTCCTAAA
CTTCATAAAAAGCTTTACATTCCAATGAAGGAGTACCCGGGCTATAATTTTATCGGCCTT
ATAATTGGGCCGAGAGGGAATACTCAGAAGAGAATGGAAAAGGAAACTGGAGCAAAGATT
GTAATTCGAGGTAAAGGATCGATTAAAGAAGGGAGGTTCCAACAGAAAGGGAATTTGAAA
CATGATCCGGCAGAGAATGAGGATTTACATGTGCTAGTGGAAGCTGATACTCAGGAGTCA
CTTGAGGCTGCTGCAGCTATGTTGGAGAAGCTTTTGCAGCCCGTCGATGAAGTACTTAAT
GAGCATAAGAGGCAGCAGCTCAGGGAACTTGCAGCGTTGAATGGAACGATTAGAGATGAA
GAGTTTTGTAGGCTTTGTGGTGAACCAGGTCATAGGCAATATGCCTGTCCTTCTCGCACC
ACCACATTTAAAAGTGATGTGCTTTGCAAAATATGTGGTGATGGAGGACATCCCACTATA
GATTGTCCAGTGAAAAATACTACTGGAAAGAAAATGGATGATGAGTATCAGAACTTCTTG
GCAGAATTGGGAGGGACAGTTCCTGAATCATCACTTAAGCAGAATGCAGCAACTCTTGCT
CTTGGTCCTGGAAGCACAGGCAGTAATCCTCCTTGGGCCAGCAGTAATAATACAAGTGGT
GGTGGTACCACTTCACACCCTGGATTAGGGTCAAATATAATGAAGCCAAAAGAATTTGAC
GATACAAACTTGTATATTGGTTACCTTCCTCCTACTCTGGATGATGATGGTTTGATCAAT
TTATTCTCTCCCTTTGGTACCATCGTAATGGCTAAAGTTATAAAGGATCGTCTCAGTGGT
CTGAGTAAAGGTTATGGTTTTGTTAAGTATTCAGATGTTCAACAAGCTAATAGTGCCATT
GCTGGCATGAATGGTCATTGTCTTGATGGGAGAACTATTGCTGTGAGAGTAGCCGGCAAA
CCCCCTCAGCCTGCTGTGCCTCCAAGCCCTCCTGCTCCAGCAATGCCCCCATATCCTGCT
CCTAATCAGGCATCTGGAGTCTATCCGTCTCAGCAGTATGCAACGGGTGGTCCCATTGGT
CCCCCTGGTGGCTATGCTGGGACTCCAGTTCCTTGGGGACCACCTGTGCCTCCACCATAT
GCCTCTTACCCACCTCCTGGATCAATCATGTATCCTCCTCCTCCTCCAGGTCAATTTGTA
CCTCCATATGGTGCACAGTATCCTCCACCAATGCCAACACCATCTTCCGGTGTCCCCGCT
CAGACAGTTTCTTCTGGCGAAAACCAGCAAAATTATACATCTTCTGGTGAGACACAACAA
AGTTATCCTCCCGGAGTGCAATCTCATAATAGTGCTCCTGTTCAATCACTTCCCAGTTAT
GCCTATGGCAATTCCGTCGCTGCATTGCCACCCCATACCCAACCTGCATATCCAACATCT
TCATACAGCTATCCTTCTTATTATGGCATGGCACCACCACCTCCTCTTCCTCCAACTGCA
ACACAGTCCAGTGTAGATCATTCACAGAGTATGAGCAATGTTCCCTGGGCCTCAAATCCA
CCAGAGCCTGCACCTGCACCTCCACCTCCACCTCCACCATCTGCAGAGAAACCTCCATAT
GGTACAGATGCAGAGTATGAAAAGTTCATGTCGGAGATGAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400012838
PEP Infomation

pacid=37445432 transcript=PGSC0003DMT400018684 locus=PGSC0003DMG400007237 ID=PGSC0003DMT400018684.v4.03 annot-version=v4.03
Sequence

MDSQSHPVQEPSQTVNSYEQYQNSSDSYYQNPSQTLGQDPAPGVCENAELNGSNSNFREN
SAKPGDNNSAQNKLSDLNSNLMLQKPLLSGNGLTNTHSGGAERDQSGGEEETSSRRRRRS
RWDPPPTDSSNDGTGGNDGTGAGRKRKSRWADDEPKPVIQLPDFMKDFAGGIEFDPEVQA
LNSRLLEISRKLQSGMPLDDRPEGARSPSPEPIYDNMGVRINTREYRAREKLNRERQEII
SQIIKKNPAFKPPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKI
VIRGKGSIKEGRFQQKGNLKHDPAENEDLHVLVEADTQESLEAAAAMLEKLLQPVDEVLN
EHKRQQLRELAALNGTIRDEEFCRLCGEPGHRQYACPSRTTTFKSDVLCKICGDGGHPTI
DCPVKNTTGKKMDDEYQNFLAELGGTVPESSLKQNAATLALGPGSTGSNPPWASSNNTSG
GGTTSHPGLGSNIMKPKEFDDTNLYIGYLPPTLDDDGLINLFSPFGTIVMAKVIKDRLSG
LSKGYGFVKYSDVQQANSAIAGMNGHCLDGRTIAVRVAGKPPQPAVPPSPPAPAMPPYPA
PNQASGVYPSQQYATGGPIGPPGGYAGTPVPWGPPVPPPYASYPPPGSIMYPPPPPGQFV
PPYGAQYPPPMPTPSSGVPAQTVSSGENQQNYTSSGETQQSYPPGVQSHNSAPVQSLPSY
AYGNSVAALPPHTQPAYPTSSYSYPSYYGMAPPPPLPPTATQSSVDHSQSMSNVPWASNP
PEPAPAPPPPPPPSAEKPPYGTDAEYEKFMSEMK*

Transcript Sequence

Transcript ID

PGSC0003DMT400018684
Transcript Infomation

pacid=37445432 locus=PGSC0003DMG400007237 ID=PGSC0003DMT400018684.v4.03 annot-version=v4.03
Sequence

ATGGATTCCCAATCACACCCAGTTCAAGAACCATCACAAACCGTAAATTCATACGAGCAG
TACCAAAATTCTTCAGATTCGTACTATCAAAACCCTTCACAAACCCTAGGTCAAGATCCC
GCACCAGGTGTTTGTGAAAATGCCGAGCTGAACGGCTCAAATTCCAACTTTCGTGAAAAC
TCAGCTAAGCCAGGCGACAATAATTCAGCTCAAAACAAACTATCAGATTTGAATTCAAAT
CTTATGTTACAGAAGCCATTGTTGTCGGGTAATGGGTTGACTAACACTCATAGTGGTGGT
GCCGAGAGGGACCAATCAGGTGGTGAAGAAGAAACTTCCAGTAGAAGAAGGAGGAGAAGC
CGATGGGACCCACCCCCGACTGATTCGAGCAATGATGGCACTGGAGGAAATGATGGAACC
GGGGCTGGACGAAAGAGGAAATCGAGGTGGGCGGATGATGAGCCGAAGCCGGTGATTCAG
TTGCCTGATTTCATGAAGGATTTCGCTGGAGGTATTGAATTTGACCCTGAAGTACAAGCT
CTTAACAGTAGATTACTTGAAATTAGTAGGAAACTGCAATCTGGTATGCCTTTAGATGAT
AGACCTGAAGGAGCTCGATCCCCTTCGCCTGAACCTATATATGATAATATGGGTGTACGT
ATAAATACGAGGGAGTATCGTGCTCGAGAAAAACTAAATAGGGAAAGACAAGAGATTATA
TCACAGATAATAAAGAAAAATCCAGCTTTTAAGCCACCAGCAGATTATAGGCCTCCTAAA
CTTCATAAAAAGCTTTACATTCCAATGAAGGAGTACCCGGGCTATAATTTTATCGGCCTT
ATAATTGGGCCGAGAGGGAATACTCAGAAGAGAATGGAAAAGGAAACTGGAGCAAAGATT
GTAATTCGAGGTAAAGGATCGATTAAAGAAGGGAGGTTCCAACAGAAAGGGAATTTGAAA
CATGATCCGGCAGAGAATGAGGATTTACATGTGCTAGTGGAAGCTGATACTCAGGAGTCA
CTTGAGGCTGCTGCAGCTATGTTGGAGAAGCTTTTGCAGCCCGTCGATGAAGTACTTAAT
GAGCATAAGAGGCAGCAGCTCAGGGAACTTGCAGCGTTGAATGGAACGATTAGAGATGAA
GAGTTTTGTAGGCTTTGTGGTGAACCAGGTCATAGGCAATATGCCTGTCCTTCTCGCACC
ACCACATTTAAAAGTGATGTGCTTTGCAAAATATGTGGTGATGGAGGACATCCCACTATA
GATTGTCCAGTGAAAAATACTACTGGAAAGAAAATGGATGATGAGTATCAGAACTTCTTG
GCAGAATTGGGAGGGACAGTTCCTGAATCATCACTTAAGCAGAATGCAGCAACTCTTGCT
CTTGGTCCTGGAAGCACAGGCAGTAATCCTCCTTGGGCCAGCAGTAATAATACAAGTGGT
GGTGGTACCACTTCACACCCTGGATTAGGGTCAAATATAATGAAGCCAAAAGAATTTGAC
GATACAAACTTGTATATTGGTTACCTTCCTCCTACTCTGGATGATGATGGTTTGATCAAT
TTATTCTCTCCCTTTGGTACCATCGTAATGGCTAAAGTTATAAAGGATCGTCTCAGTGGT
CTGAGTAAAGGTTATGGTTTTGTTAAGTATTCAGATGTTCAACAAGCTAATAGTGCCATT
GCTGGCATGAATGGTCATTGTCTTGATGGGAGAACTATTGCTGTGAGAGTAGCCGGCAAA
CCCCCTCAGCCTGCTGTGCCTCCAAGCCCTCCTGCTCCAGCAATGCCCCCATATCCTGCT
CCTAATCAGGCATCTGGAGTCTATCCGTCTCAGCAGTATGCAACGGGTGGTCCCATTGGT
CCCCCTGGTGGCTATGCTGGGACTCCAGTTCCTTGGGGACCACCTGTGCCTCCACCATAT
GCCTCTTACCCACCTCCTGGATCAATCATGTATCCTCCTCCTCCTCCAGGTCAATTTGTA
CCTCCATATGGTGCACAGTATCCTCCACCAATGCCAACACCATCTTCCGGTGTCCCCGCT
CAGACAGTTTCTTCTGGCGAAAACCAGCAAAATTATACATCTTCTGGTGAGACACAACAA
AGTTATCCTCCCGGAGTGCAATCTCATAATAGTGCTCCTGTTCAATCACTTCCCAGTTAT
GCCTATGGCAATTCCGTCGCTGCATTGCCACCCCATACCCAACCTGCATATCCAACATCT
TCATACAGCTATCCTTCTTATTATGGCATGGCACCACCACCTCCTCTTCCTCCAACTGCA
ACACAGTCCAGTGTAGATCATTCACAGAGTATGAGCAATGTTCCCTGGGCCTCAAATCCA
CCAGAGCCTGCACCTGCACCTCCACCTCCACCTCCACCATCTGCAGAGAAACCTCCATAT
GGTACAGATGCAGAGTATGAAAAGTTCATGTCGGAGATGAAATGA