Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018674
CDS Infomation

pacid=37445385 polypeptide=PGSC0003DMP400012828 locus=PGSC0003DMG400007233 ID=PGSC0003DMT400018674.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTTCCGACAACAACAATGACGTTGTCACTGATTTCTTCCCATACTATCGACTC
TACAAAGACGGTCGAGTAGAACGTTTCTACGAACTTGCTGGTATACATGAAGTTCCACCA
TCGCTGGAAGATCCAGCGACTGGTGTATCATCAAAAGACGTGAGCATCTCTGCTCACGTC
TCTGCTAGACTCTACCTTCCAAAAAACACCGCACCCAATCAAAAACTCCCCGTCTTAGTG
TATTACCACGGCGGAGGACTTGTATTAGGATCCGCATTTTTCAAAACAGAGCATTGTTAC
CTCAACTATCTGGTTTCCGAATCAAATTGCATAGCGATCTCTGTAAATTACCGTCTTGCC
CCTGAGCATGACATCCCGACAATCTATCAGGATTGTTGGGATGCTCTTCAGTGGGTCGCT
TCACACTCTGTTTCTGATACAATTAACAAAGACCCGTGGATTGAAAACCATGGTGATTTT
AACCGCGTGTTTGTAGGGGGTGACAGTGCTGGAGGTAATATAGTTTATAATATGATCATG
AGAGCGGGGAGAGAAAAATTGATCGGTGATGTGAAACTTTTGGGTGCAATACTTGCATTT
CCTTATTTGATGATACCATCTATTGAAAACTATGACAAAGGTTTGTCTTATAAGCTTTGG
AATACCATTTGCCCGCTCTCTGAACGGGGAAATGATAGTCCAATGGTTAATCCAGTCTCG
AAAAAGTGTCCTAGCTTATCGACGCTAGGATGCTCGAGACTTTTTGTGTGTACAGGAGAG
AAAGACGAACTTGTCCCAGGAGAAGTTGCGACAAAATTCGCCGAAGCTGTGAAGAAAAGT
GGATGGAAAGGGGAAATTGAGTCCATTTTATTTGAAGGTGAAGGTCATTGCTTTCAGTGT
GAGAATCCTCAAGCTGAGAAATCTAAAGATTTGATCAAACGTATAGTTTCTTTCATCCAA
CGCGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012828
PEP Infomation

pacid=37445385 transcript=PGSC0003DMT400018674 locus=PGSC0003DMG400007233 ID=PGSC0003DMT400018674.v4.03 annot-version=v4.03
Sequence

MAASDNNNDVVTDFFPYYRLYKDGRVERFYELAGIHEVPPSLEDPATGVSSKDVSISAHV
SARLYLPKNTAPNQKLPVLVYYHGGGLVLGSAFFKTEHCYLNYLVSESNCIAISVNYRLA
PEHDIPTIYQDCWDALQWVASHSVSDTINKDPWIENHGDFNRVFVGGDSAGGNIVYNMIM
RAGREKLIGDVKLLGAILAFPYLMIPSIENYDKGLSYKLWNTICPLSERGNDSPMVNPVS
KKCPSLSTLGCSRLFVCTGEKDELVPGEVATKFAEAVKKSGWKGEIESILFEGEGHCFQC
ENPQAEKSKDLIKRIVSFIQRD*

Transcript Sequence

Transcript ID

PGSC0003DMT400018674
Transcript Infomation

pacid=37445385 locus=PGSC0003DMG400007233 ID=PGSC0003DMT400018674.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTTCCGACAACAACAATGACGTTGTCACTGATTTCTTCCCATACTATCGACTC
TACAAAGACGGTCGAGTAGAACGTTTCTACGAACTTGCTGGTATACATGAAGTTCCACCA
TCGCTGGAAGATCCAGCGACTGGTGTATCATCAAAAGACGTGAGCATCTCTGCTCACGTC
TCTGCTAGACTCTACCTTCCAAAAAACACCGCACCCAATCAAAAACTCCCCGTCTTAGTG
TATTACCACGGCGGAGGACTTGTATTAGGATCCGCATTTTTCAAAACAGAGCATTGTTAC
CTCAACTATCTGGTTTCCGAATCAAATTGCATAGCGATCTCTGTAAATTACCGTCTTGCC
CCTGAGCATGACATCCCGACAATCTATCAGGATTGTTGGGATGCTCTTCAGTGGGTCGCT
TCACACTCTGTTTCTGATACAATTAACAAAGACCCGTGGATTGAAAACCATGGTGATTTT
AACCGCGTGTTTGTAGGGGGTGACAGTGCTGGAGGTAATATAGTTTATAATATGATCATG
AGAGCGGGGAGAGAAAAATTGATCGGTGATGTGAAACTTTTGGGTGCAATACTTGCATTT
CCTTATTTGATGATACCATCTATTGAAAACTATGACAAAGGTTTGTCTTATAAGCTTTGG
AATACCATTTGCCCGCTCTCTGAACGGGGAAATGATAGTCCAATGGTTAATCCAGTCTCG
AAAAAGTGTCCTAGCTTATCGACGCTAGGATGCTCGAGACTTTTTGTGTGTACAGGAGAG
AAAGACGAACTTGTCCCAGGAGAAGTTGCGACAAAATTCGCCGAAGCTGTGAAGAAAAGT
GGATGGAAAGGGGAAATTGAGTCCATTTTATTTGAAGGTGAAGGTCATTGCTTTCAGTGT
GAGAATCCTCAAGCTGAGAAATCTAAAGATTTGATCAAACGTATAGTTTCTTTCATCCAA
CGCGATTAA