Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018673
CDS Infomation

pacid=37425233 polypeptide=PGSC0003DMP400012827 locus=PGSC0003DMG400007232 ID=PGSC0003DMT400018673.v4.03 annot-version=v4.03
Sequence

ATGGAATCAACGCCGGTGGCAAAAATGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTT
CAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGCCAGGTATGTCCGCCCAGAACAA
GAATCTCCGGTCACGTACGCTGGAGCATCGGTCCCAGTTATCGATATTCAAAAGTTGGTT
TCAGGGGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCGGCATGTCAACAATGGGGT
TTCCTCCAGGTTATAAACCATGGAGTGACACCTTCGATCCTGGAGGATTTCAAGAGAGAG
GTTATTGATTTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTATGGCAACAAGAAGAC
AGCTTTGAAGGTTTTGGGAATTCATTCGTTGTATCAGAGGAGCAGAAACTTGATTGGAAT
GACATGTTTGGCATAATGACTCTTCCTCTTCGTATCCGGAAAGTGGACTTATTTCAGAAG
TTGCCCTCGAATCTCAGGGGCATTATAGAAGCATACTCGAATGAAATCAAGAGCCTAGCA
ATGATCATCGTATGTCAATTGGCAAAGGCTTTAAGGATAGATGAAAATGAAATGAGAGAG
CTATTCAGTGATGGTGTGCAGTCAATAAGGATGAATTATTATCCACCTTGCCCTGAGCCA
CACAAAACCATTGGCTTTAGCCCTCATTCTGATGCTGATGCCCTCACCATCCTTTTCCAG
CTCGATGAAACTGAAGGTCTCCAAGTTCGAAAAGACGACATTTGGGTGCCTATAAAGCCC
CTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAACTTCTCT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400012827
PEP Infomation

pacid=37425233 transcript=PGSC0003DMT400018673 locus=PGSC0003DMG400007232 ID=PGSC0003DMT400018673.v4.03 annot-version=v4.03
Sequence

MESTPVAKMNFGKSLLVPSVQELAKQHLTNIPARYVRPEQESPVTYAGASVPVIDIQKLV
SGDSMDSELQKLHSACQQWGFLQVINHGVTPSILEDFKREVIDLFKLPMEEKKKLWQQED
SFEGFGNSFVVSEEQKLDWNDMFGIMTLPLRIRKVDLFQKLPSNLRGIIEAYSNEIKSLA
MIIVCQLAKALRIDENEMRELFSDGVQSIRMNYYPPCPEPHKTIGFSPHSDADALTILFQ
LDETEGLQVRKDDIWVPIKPLPNALIVNIGDMMEVNNNFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400018673
Transcript Infomation

pacid=37425233 locus=PGSC0003DMG400007232 ID=PGSC0003DMT400018673.v4.03 annot-version=v4.03
Sequence

ATGGAATCAACGCCGGTGGCAAAAATGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTT
CAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGCCAGGTATGTCCGCCCAGAACAA
GAATCTCCGGTCACGTACGCTGGAGCATCGGTCCCAGTTATCGATATTCAAAAGTTGGTT
TCAGGGGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCGGCATGTCAACAATGGGGT
TTCCTCCAGGTTATAAACCATGGAGTGACACCTTCGATCCTGGAGGATTTCAAGAGAGAG
GTTATTGATTTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTATGGCAACAAGAAGAC
AGCTTTGAAGGTTTTGGGAATTCATTCGTTGTATCAGAGGAGCAGAAACTTGATTGGAAT
GACATGTTTGGCATAATGACTCTTCCTCTTCGTATCCGGAAAGTGGACTTATTTCAGAAG
TTGCCCTCGAATCTCAGGGGCATTATAGAAGCATACTCGAATGAAATCAAGAGCCTAGCA
ATGATCATCGTATGTCAATTGGCAAAGGCTTTAAGGATAGATGAAAATGAAATGAGAGAG
CTATTCAGTGATGGTGTGCAGTCAATAAGGATGAATTATTATCCACCTTGCCCTGAGCCA
CACAAAACCATTGGCTTTAGCCCTCATTCTGATGCTGATGCCCTCACCATCCTTTTCCAG
CTCGATGAAACTGAAGGTCTCCAAGTTCGAAAAGACGACATTTGGGTGCCTATAAAGCCC
CTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAACTTCTCT
TGA