Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018621
CDS Infomation

pacid=37427273 polypeptide=PGSC0003DMP400012806 locus=PGSC0003DMG400007225 ID=PGSC0003DMT400018621.v4.03 annot-version=v4.03
Sequence

ATGAATTCATTTTCCACACTCTCATTTCTTCTTCTCCTTGTGCTTCCCCTCTTGGCTTCA
TGTCATGAAAAACAGGTTTATATAGTGTATTTTGGAGGGCATAATGAGGAGAAAGCATTG
TATGAGATTGAAGAAAACCATCACTCATATTTATTATCAGTGAAGGATAATGAAGAAGAA
GCCAAATCTTCTCTCATTTATAGTTATAAACACAGCATCAATGGATTTGCCGCACTTCTC
ACCCCTCATCAAGCCTCTAAATTATCTGAGTTGGAAGAAGTGGTATCAGTGTATAAAAGT
GAGCCAAGAAAATATAGTTTGCATACAACAAGGTCATGGGAGTTTTCTGGAGTGGAAGAG
TCAGTGGCACCAAATTCTTTGAACAAAGATGACTTGCTATTGAAAGCCAGATATGGAAAA
GATGTTATTATTGGGGTTCTTGATAGCGGGCTATGGCCAGAATCTAAGAGCTTTAGTGAT
GAAGGGATAGGACCAATTCCAAAGTCATGGAAAGGAATCTGCCAATCTGGAGATGCTTTC
AACTCTTCAAACTGTAATAAGAAAATAATTGGAGCTAGGTACTATATAAAAGGTTATGAA
CAATATTATGGCCCTCTAAACAGAACCTTAGATTATCTATCTCCAAGAGACAAGGATGGA
CATGGAACTCATACATCATCAACAGCAGGAGGTAAAAAGGTTCCAAATGCCTCTGCCATT
GGTGGCTTTGCATCTGGCACCGCCTTGGGTGGGGCCCCACTCGCACGGCTTGCAATGTAC
AAAGTCTGTTGGGCTATTCCAAGGGAGGGGAAAGAAGATGGGAACACTTGCTTTGAAGAA
GACATGTTAGCAGCACTGGATGATGCTATTGCAGATGGTGTTGATGTTATTAGTATTTCC
ATTGGAACAAAACAGCCTCAGCCTTTTGATCAAGACAGCATTGCAATTGGAGCACTTCAT
GCCATGAAGAAGAATATAGTTGTATCTTGTAGTGCTGGAAATTCAGGGCCTGCACCTTCT
ACATTGTCTAATACAGCTCCTTGGATTATCACTGTTGGTGCAAGCAGTGTTGACAGGAAA
TTTTTGTCACCAATTGTACTAGGAAATGGCAAGAAATTCATGGGACAAACAGTTACACCT
TACAAGCTGAAGAAGAAGATGTACCCTCTAGTTTATGCCGGAGAAGTGATCAACACTAAC
GTAACCAAAGATTTAGCAGGGCAATGTTTACCAGGTTCTCTTTCGCCAGAAAAGGCCAAG
GGGAAAATAGTAATGTGCTTGAGAGGGAATGGGACAAGAGTAGGAAAAGGCGGAGAAGTG
AAAAGGGCAGGAGGAATTGGTTACATACTAGGAAATAGTAAAGCAAATGGGGCTGAGTTA
GCAGCAGATGCTCATCTTCTTCCAGCCACAGCAGTGGACTATAAAAGTGGAGTTCAGATT
CTCAACTACATCAGTTCTACAAAGTCCCCTGTAGCTTATATAGTCCCAGCTAAAACAGTT
TTGCATGCTAAACCAGCACCTTACATGGCTTCATTCACTAGTAGAGGTCCAAGTGCAGTT
GCACCGGATATCCTCAAGCCGGATATCACGGCACCAGGGCTGAATATATTGGCAGCATGG
AGTGGAGGATCATCCCCTACGAAGCTAGATATTGACAACCGTGTAGTTGAGTATAACATA
CTCTCAGGTACTTCCATGTCTTGCCCTCATGTTGGTGGCGCCGCAGCACTTTTGAAGGCT
ATACATCCCACTTGGAGCAGTGCTGCAATAAGATCTGCTCTCATAACCTCAGCTGAATTA
CAAAATAATGTTGGTGAGCAAATAACTGATGCATCTGGGAAGCCAGCAGATCCATTCCAG
TTCGGAGGAGGGCATTTCAGGCCATCAAAGGCAGCAGATCCTGGACTTGTCTACGATGCT
TCCTACCAAGACTATCTTCTCTTCCTGTGTGCCTCTGGTGTTAAGGATCTTGACAAATCC
TTCAAGTGTCCTAAGAAATCACATTCGCCTAGAGACCTAAATTACCCGTCTCTGGCTATT
CCAAATCTCAATGACACTGTGACTGCTAGAAGAAGATTGACAAATGTTGGTGCACCAAAG
AGCATTTACTATGCCAGTGCCAAACCTCCATTGGGATTCTCTATTGAGATTTCACCACCC
GTCTTGGCTTTTAACCACGTTGGCTCCGAGAGGACGTTCACTATCACAGTGAAAGCTCAC
CGTGACATGATGCATAGAATTCCGAAAGATCAGTATGTGTTTGGATGGTATTCCTGGAAT
GATGGAATCCATAATGTTAGGAGTCCAATTGCTGTAAAATTGGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400012806
PEP Infomation

pacid=37427273 transcript=PGSC0003DMT400018621 locus=PGSC0003DMG400007225 ID=PGSC0003DMT400018621.v4.03 annot-version=v4.03
Sequence

MNSFSTLSFLLLLVLPLLASCHEKQVYIVYFGGHNEEKALYEIEENHHSYLLSVKDNEEE
AKSSLIYSYKHSINGFAALLTPHQASKLSELEEVVSVYKSEPRKYSLHTTRSWEFSGVEE
SVAPNSLNKDDLLLKARYGKDVIIGVLDSGLWPESKSFSDEGIGPIPKSWKGICQSGDAF
NSSNCNKKIIGARYYIKGYEQYYGPLNRTLDYLSPRDKDGHGTHTSSTAGGKKVPNASAI
GGFASGTALGGAPLARLAMYKVCWAIPREGKEDGNTCFEEDMLAALDDAIADGVDVISIS
IGTKQPQPFDQDSIAIGALHAMKKNIVVSCSAGNSGPAPSTLSNTAPWIITVGASSVDRK
FLSPIVLGNGKKFMGQTVTPYKLKKKMYPLVYAGEVINTNVTKDLAGQCLPGSLSPEKAK
GKIVMCLRGNGTRVGKGGEVKRAGGIGYILGNSKANGAELAADAHLLPATAVDYKSGVQI
LNYISSTKSPVAYIVPAKTVLHAKPAPYMASFTSRGPSAVAPDILKPDITAPGLNILAAW
SGGSSPTKLDIDNRVVEYNILSGTSMSCPHVGGAAALLKAIHPTWSSAAIRSALITSAEL
QNNVGEQITDASGKPADPFQFGGGHFRPSKAADPGLVYDASYQDYLLFLCASGVKDLDKS
FKCPKKSHSPRDLNYPSLAIPNLNDTVTARRRLTNVGAPKSIYYASAKPPLGFSIEISPP
VLAFNHVGSERTFTITVKAHRDMMHRIPKDQYVFGWYSWNDGIHNVRSPIAVKLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400018621
Transcript Infomation

pacid=37427273 locus=PGSC0003DMG400007225 ID=PGSC0003DMT400018621.v4.03 annot-version=v4.03
Sequence

ATGAATTCATTTTCCACACTCTCATTTCTTCTTCTCCTTGTGCTTCCCCTCTTGGCTTCA
TGTCATGAAAAACAGGTTTATATAGTGTATTTTGGAGGGCATAATGAGGAGAAAGCATTG
TATGAGATTGAAGAAAACCATCACTCATATTTATTATCAGTGAAGGATAATGAAGAAGAA
GCCAAATCTTCTCTCATTTATAGTTATAAACACAGCATCAATGGATTTGCCGCACTTCTC
ACCCCTCATCAAGCCTCTAAATTATCTGAGTTGGAAGAAGTGGTATCAGTGTATAAAAGT
GAGCCAAGAAAATATAGTTTGCATACAACAAGGTCATGGGAGTTTTCTGGAGTGGAAGAG
TCAGTGGCACCAAATTCTTTGAACAAAGATGACTTGCTATTGAAAGCCAGATATGGAAAA
GATGTTATTATTGGGGTTCTTGATAGCGGGCTATGGCCAGAATCTAAGAGCTTTAGTGAT
GAAGGGATAGGACCAATTCCAAAGTCATGGAAAGGAATCTGCCAATCTGGAGATGCTTTC
AACTCTTCAAACTGTAATAAGAAAATAATTGGAGCTAGGTACTATATAAAAGGTTATGAA
CAATATTATGGCCCTCTAAACAGAACCTTAGATTATCTATCTCCAAGAGACAAGGATGGA
CATGGAACTCATACATCATCAACAGCAGGAGGTAAAAAGGTTCCAAATGCCTCTGCCATT
GGTGGCTTTGCATCTGGCACCGCCTTGGGTGGGGCCCCACTCGCACGGCTTGCAATGTAC
AAAGTCTGTTGGGCTATTCCAAGGGAGGGGAAAGAAGATGGGAACACTTGCTTTGAAGAA
GACATGTTAGCAGCACTGGATGATGCTATTGCAGATGGTGTTGATGTTATTAGTATTTCC
ATTGGAACAAAACAGCCTCAGCCTTTTGATCAAGACAGCATTGCAATTGGAGCACTTCAT
GCCATGAAGAAGAATATAGTTGTATCTTGTAGTGCTGGAAATTCAGGGCCTGCACCTTCT
ACATTGTCTAATACAGCTCCTTGGATTATCACTGTTGGTGCAAGCAGTGTTGACAGGAAA
TTTTTGTCACCAATTGTACTAGGAAATGGCAAGAAATTCATGGGACAAACAGTTACACCT
TACAAGCTGAAGAAGAAGATGTACCCTCTAGTTTATGCCGGAGAAGTGATCAACACTAAC
GTAACCAAAGATTTAGCAGGGCAATGTTTACCAGGTTCTCTTTCGCCAGAAAAGGCCAAG
GGGAAAATAGTAATGTGCTTGAGAGGGAATGGGACAAGAGTAGGAAAAGGCGGAGAAGTG
AAAAGGGCAGGAGGAATTGGTTACATACTAGGAAATAGTAAAGCAAATGGGGCTGAGTTA
GCAGCAGATGCTCATCTTCTTCCAGCCACAGCAGTGGACTATAAAAGTGGAGTTCAGATT
CTCAACTACATCAGTTCTACAAAGTCCCCTGTAGCTTATATAGTCCCAGCTAAAACAGTT
TTGCATGCTAAACCAGCACCTTACATGGCTTCATTCACTAGTAGAGGTCCAAGTGCAGTT
GCACCGGATATCCTCAAGCCGGATATCACGGCACCAGGGCTGAATATATTGGCAGCATGG
AGTGGAGGATCATCCCCTACGAAGCTAGATATTGACAACCGTGTAGTTGAGTATAACATA
CTCTCAGGTACTTCCATGTCTTGCCCTCATGTTGGTGGCGCCGCAGCACTTTTGAAGGCT
ATACATCCCACTTGGAGCAGTGCTGCAATAAGATCTGCTCTCATAACCTCAGCTGAATTA
CAAAATAATGTTGGTGAGCAAATAACTGATGCATCTGGGAAGCCAGCAGATCCATTCCAG
TTCGGAGGAGGGCATTTCAGGCCATCAAAGGCAGCAGATCCTGGACTTGTCTACGATGCT
TCCTACCAAGACTATCTTCTCTTCCTGTGTGCCTCTGGTGTTAAGGATCTTGACAAATCC
TTCAAGTGTCCTAAGAAATCACATTCGCCTAGAGACCTAAATTACCCGTCTCTGGCTATT
CCAAATCTCAATGACACTGTGACTGCTAGAAGAAGATTGACAAATGTTGGTGCACCAAAG
AGCATTTACTATGCCAGTGCCAAACCTCCATTGGGATTCTCTATTGAGATTTCACCACCC
GTCTTGGCTTTTAACCACGTTGGCTCCGAGAGGACGTTCACTATCACAGTGAAAGCTCAC
CGTGACATGATGCATAGAATTCCGAAAGATCAGTATGTGTTTGGATGGTATTCCTGGAAT
GATGGAATCCATAATGTTAGGAGTCCAATTGCTGTAAAATTGGCATAA