Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018617
CDS Infomation

pacid=37443683 polypeptide=PGSC0003DMP400012802 locus=PGSC0003DMG400007222 ID=PGSC0003DMT400018617.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTACGGAATCCAAAAAAGTGAACTCCGAGAACCCGGCGGCGGCAAAAACCGGC
GGCAAAGTGTGGTTTTATTCTTTGCTCCTCACCTTACAGTATGGTGCTCAGCCGCTTATA
TCCAAGCGTTTTGTCAGGCGTGAAGTGATAGTTACTTCATCTGTTTTAACATGTGAAGCA
GTCAAGGTTATTTGTGCTCTTGTTCTCATGGCAAAAGAAGGCACTTTGAAGAAAAATTAC
AGGGAGTGGACCTTATTTGGCTCTTTGACTGCATCTGGACTGCCTGCTGCTATCTATGCA
CTACAAAACAGCTTATTGCAGATCTCATATAAAAATCTTGATTCACTCACGTTTTCAATC
TTGAACCAAACAAAACTGTTCTTCACAGCCTTGTTTACTTACATAATTTTGAGGCAGAAG
CAATCCATTCAACAAATTGGGGCTCTTTTCTTGTTAATCATGGCAGCTGTCCTGTTAAGT
GTTGGTGAGGGCTCCAGCAAAGCTTCCAGTAGTAGTAACCCCGATGAGATCTTATTCTAT
GGAATTGTACCAGTTTTGGTTGCATCTGTGCTTTCTGGTATGGCATCTGCCTTGTGTCAA
TGGGCATCTCAGGTTAAGAAACACTCATCTTACCTGATGACTGTTGAGATGTCCATTATT
GGGAGTCTCTGCTTGATAAGTAGTACTTCCAAGTCCCCAGATGGAGAAGCTATTAGACAG
CATGGATTCTTCTATGGATGGACTGCATTAACTTTGATCCCTGTTATTTTAAATGCCGTT
GGTGGAATTCTTGTGGGTCTTGTGACTTCATATGCCGGTGGTGTTAGGAAGGGTTTTGTC
ATTGTGTCTGCACTTCTTGTCACTGCTTTGCTCCAGTTCATCTTCGATGGAAAACTTCCT
TCACCATACTGCCTCGTGGCTCTTCCATTGGTCATGATTAGCATAAGCATATACCAAAAA
TACCCATATCGTGTTAAAAAGAAGCAAATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012802
PEP Infomation

pacid=37443683 transcript=PGSC0003DMT400018617 locus=PGSC0003DMG400007222 ID=PGSC0003DMT400018617.v4.03 annot-version=v4.03
Sequence

MAATESKKVNSENPAAAKTGGKVWFYSLLLTLQYGAQPLISKRFVRREVIVTSSVLTCEA
VKVICALVLMAKEGTLKKNYREWTLFGSLTASGLPAAIYALQNSLLQISYKNLDSLTFSI
LNQTKLFFTALFTYIILRQKQSIQQIGALFLLIMAAVLLSVGEGSSKASSSSNPDEILFY
GIVPVLVASVLSGMASALCQWASQVKKHSSYLMTVEMSIIGSLCLISSTSKSPDGEAIRQ
HGFFYGWTALTLIPVILNAVGGILVGLVTSYAGGVRKGFVIVSALLVTALLQFIFDGKLP
SPYCLVALPLVMISISIYQKYPYRVKKKQM*

Transcript Sequence

Transcript ID

PGSC0003DMT400018617
Transcript Infomation

pacid=37443683 locus=PGSC0003DMG400007222 ID=PGSC0003DMT400018617.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTACGGAATCCAAAAAAGTGAACTCCGAGAACCCGGCGGCGGCAAAAACCGGC
GGCAAAGTGTGGTTTTATTCTTTGCTCCTCACCTTACAGTATGGTGCTCAGCCGCTTATA
TCCAAGCGTTTTGTCAGGCGTGAAGTGATAGTTACTTCATCTGTTTTAACATGTGAAGCA
GTCAAGGTTATTTGTGCTCTTGTTCTCATGGCAAAAGAAGGCACTTTGAAGAAAAATTAC
AGGGAGTGGACCTTATTTGGCTCTTTGACTGCATCTGGACTGCCTGCTGCTATCTATGCA
CTACAAAACAGCTTATTGCAGATCTCATATAAAAATCTTGATTCACTCACGTTTTCAATC
TTGAACCAAACAAAACTGTTCTTCACAGCCTTGTTTACTTACATAATTTTGAGGCAGAAG
CAATCCATTCAACAAATTGGGGCTCTTTTCTTGTTAATCATGGCAGCTGTCCTGTTAAGT
GTTGGTGAGGGCTCCAGCAAAGCTTCCAGTAGTAGTAACCCCGATGAGATCTTATTCTAT
GGAATTGTACCAGTTTTGGTTGCATCTGTGCTTTCTGGTATGGCATCTGCCTTGTGTCAA
TGGGCATCTCAGGTTAAGAAACACTCATCTTACCTGATGACTGTTGAGATGTCCATTATT
GGGAGTCTCTGCTTGATAAGTAGTACTTCCAAGTCCCCAGATGGAGAAGCTATTAGACAG
CATGGATTCTTCTATGGATGGACTGCATTAACTTTGATCCCTGTTATTTTAAATGCCGTT
GGTGGAATTCTTGTGGGTCTTGTGACTTCATATGCCGGTGGTGTTAGGAAGGGTTTTGTC
ATTGTGTCTGCACTTCTTGTCACTGCTTTGCTCCAGTTCATCTTCGATGGAAAACTTCCT
TCACCATACTGCCTCGTGGCTCTTCCATTGGTCATGATTAGCATAAGCATATACCAAAAA
TACCCATATCGTGTTAAAAAGAAGCAAATGTGA