Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018596
CDS Infomation

pacid=37442270 polypeptide=PGSC0003DMP400012796 locus=PGSC0003DMG400007217 ID=PGSC0003DMT400018596.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGAGTGATATATCGAAAATAGAAGGGCAAGGAACAATACAGTCTCCGATTTCT
TCAGTTGTTGCAATAGCCATAACTGGGAACAAGAATAGCAGATATGTGGTGAAATGGGCA
TTGGAGAAATTTATTCCAGAGGGTGAGACGCGCTTCATGTTGCTACATGTCCGCCCTGAG
ATCACCGCGGTTCCAACTCCTATGGGGAACTTGATTCCTATTGCACAAGTAAGAGAAGAC
GTAGCGGATGCTTTCAGGAAGGAAGTTGAGTTGCAAGCAAGTGAAAAACTTCTTCCTTAC
AAGACAATGTGTAGTCGGAGACAGGTACAAGTAGGAGTTGTTCAACTTGAATCAAATGAT
GTTATAAATGCAATTGCAGGGGTAGTATCTAAATGTTCTATCAACAAGCTTGTTATTGGA
ACCTCAACTCCTGGCCTATTTTCAAGGGGAAGAAATTTATCTGCAAGTATATCAGAAACA
TCTCCAACCTTTTGCACAGTTTATGCTGTGTCAAAGGGAAAACTGTCATCAGTGCGGGCC
TCGAGTACAGACAACAACAGATTCCTTATAGATGATAGCAGTGATACAAGTAGTTCATCT
AACAACTCTACAGGCCACAGCTTTAGCTCACAAGCAGAGAGGATGGATCACAGCTCAACT
TCACCTGCTTCATACTCTCATTTGTACTCTCCTTCTCATCAACCGCAACGTTATCAAGCT
AAATCTCCAGTGCACCAGGCCCTCCAGACACTTCTCCATAAAAGAACACATTTCAGCGAA
AACATCCAATCTAGAAGTTCATCTGTCGATATTGGAGAAGCATTTCAAGCTCTTTCAATT
AAAAGCAATACTCCTTTGCATAAAAGAGCAATTTTGGATGAAGTCATCCATCCTAGAGCT
CTATCTGTTGCTATTGGAGAAGCTGATGATGAAAAAAGTTGCTATTTCAGTAGCTCGGGA
ATTACTGATCTCTATAATCGTGCTTCAAGTTTCAAAAAAGCGAAAGTCGACAACCAATCA
TGGTCAACAAGTCAGTATTCTACCTCAGATGTTCCAACAGATTCTTCATCTGGAAGTCAG
GTTAACATCAATTATGACCTAGAAAAACTGAGAATTGAGCTCAGACATATTCAAGGAATG
TATGCAATAGCCCAAACTGAGGCGATAGATGCTTCTCGGAAGTTGAATGAATTTCAGAAG
CTTCGAGTAGACGAAGCAAATAAACTTAAGCAGATAAACCTTAAAGAGGAGGAAGCGAAA
GAATTGGCAGAGCAAGAGAAGTTAAAATGTGAAGCAGCAAAGAAGGAAGCTGACTATGCA
ATGGAATGTGTTGAAAGAGAAGCTGAGCAAAGAAGAGCAGCAGAGAGCATTGCCAACCGG
GAGGCTAGAACAAAAGAAAAGCTAGAGAAATCATTGGCACTACCTTTGCATCACTACCAG
GAATTCACGTGGGAAGAGATTGTGACGGCTAGCTCATCATTCTCCGAGGATCTTAAAATA
GGAATGGGATCATATGGAATGGTCTACAAGTGCTATTTGCATCATACACCTGCAGCAGTG
AAAGTTCTTCATTCAGCTGAGGCTCATAGAACTAAGCAATTTCAACAAGAGCTTGAAGTA
TTGAGCAAAATTCATCATCCTCACTTGTTATTTCTTCTCGGTGCATGCCCTGAACGTGGT
TGCCTAGTTTATGAGTACATGGAGAATGGAAGTTTGGAGGATAGGTTGACAAGGAAAAAC
AACACACCTCCACTTACATGGTTTGACAGGGTTCGCATAGTGTGGGAAGTTGCTTCAGCT
CTTGTTTTCCTTCATAACACGAAGCCAAATCCGATCATACACCGTGATTTAAAGCCAGCT
AACATACTCCTTGATCACAACTTAGTCAGCAAAATTGGAGATGTTGGTCTTTCAACAATG
GTTCAGTCAGACTCTTCCTCAGCAATGACCGCATATAAAGACACTAGTCCAGTTGGCACA
CTTTGCTATATAGATCCTGAGTATCAAAGGACAGGATTAGTCTCTACAAAATCTGATGTT
TATGCTTTTGGGATGGTCATATTGCAGTTGCTTACTGCAAAAAGAGCCATAGCTTTAGCC
CACATGGTAGAAATGGCTACCGAAGAGGATAAACTGGTGGAGTTGCTGGATCAAGAAGCC
GGTGAATGGCCTCTTGAAGAGACGAAGGAACTGGCTGTACTTGCTCTAAAATGCACTGAA
CTTCGACGTAGAGACAGACCTGACCTGAAAGATGAAGTTCTCCCTATTTTGGAGAGATTT
AAAGAGGTTGCTGATAGAGCTCGACATTCGAAATATAATCAACCTCCACCTCCTAGCCAC
TTCAAATGCCCCCTACTCAAGGAAGTGATTCAAGACCCCTGTGTTGCGGCTGATGGATAC
ACTTATGACCGGAAGGCAATAGAGTCATGGCTCGCGGACAATGATAATTCACCAGTTACA
AATTTACCATTACCACATAAGCACCTGCTTCCAAATTATGCACTTCTCTCAGCTATCAAA
GAGTGGAAGTCAGGGAAACATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012796
PEP Infomation

pacid=37442270 transcript=PGSC0003DMT400018596 locus=PGSC0003DMG400007217 ID=PGSC0003DMT400018596.v4.03 annot-version=v4.03
Sequence

MEESDISKIEGQGTIQSPISSVVAIAITGNKNSRYVVKWALEKFIPEGETRFMLLHVRPE
ITAVPTPMGNLIPIAQVREDVADAFRKEVELQASEKLLPYKTMCSRRQVQVGVVQLESND
VINAIAGVVSKCSINKLVIGTSTPGLFSRGRNLSASISETSPTFCTVYAVSKGKLSSVRA
SSTDNNRFLIDDSSDTSSSSNNSTGHSFSSQAERMDHSSTSPASYSHLYSPSHQPQRYQA
KSPVHQALQTLLHKRTHFSENIQSRSSSVDIGEAFQALSIKSNTPLHKRAILDEVIHPRA
LSVAIGEADDEKSCYFSSSGITDLYNRASSFKKAKVDNQSWSTSQYSTSDVPTDSSSGSQ
VNINYDLEKLRIELRHIQGMYAIAQTEAIDASRKLNEFQKLRVDEANKLKQINLKEEEAK
ELAEQEKLKCEAAKKEADYAMECVEREAEQRRAAESIANREARTKEKLEKSLALPLHHYQ
EFTWEEIVTASSSFSEDLKIGMGSYGMVYKCYLHHTPAAVKVLHSAEAHRTKQFQQELEV
LSKIHHPHLLFLLGACPERGCLVYEYMENGSLEDRLTRKNNTPPLTWFDRVRIVWEVASA
LVFLHNTKPNPIIHRDLKPANILLDHNLVSKIGDVGLSTMVQSDSSSAMTAYKDTSPVGT
LCYIDPEYQRTGLVSTKSDVYAFGMVILQLLTAKRAIALAHMVEMATEEDKLVELLDQEA
GEWPLEETKELAVLALKCTELRRRDRPDLKDEVLPILERFKEVADRARHSKYNQPPPPSH
FKCPLLKEVIQDPCVAADGYTYDRKAIESWLADNDNSPVTNLPLPHKHLLPNYALLSAIK
EWKSGKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400018596
Transcript Infomation

pacid=37442270 locus=PGSC0003DMG400007217 ID=PGSC0003DMT400018596.v4.03 annot-version=v4.03
Sequence

ATGGAGGAGAGTGATATATCGAAAATAGAAGGGCAAGGAACAATACAGTCTCCGATTTCT
TCAGTTGTTGCAATAGCCATAACTGGGAACAAGAATAGCAGATATGTGGTGAAATGGGCA
TTGGAGAAATTTATTCCAGAGGGTGAGACGCGCTTCATGTTGCTACATGTCCGCCCTGAG
ATCACCGCGGTTCCAACTCCTATGGGGAACTTGATTCCTATTGCACAAGTAAGAGAAGAC
GTAGCGGATGCTTTCAGGAAGGAAGTTGAGTTGCAAGCAAGTGAAAAACTTCTTCCTTAC
AAGACAATGTGTAGTCGGAGACAGGTACAAGTAGGAGTTGTTCAACTTGAATCAAATGAT
GTTATAAATGCAATTGCAGGGGTAGTATCTAAATGTTCTATCAACAAGCTTGTTATTGGA
ACCTCAACTCCTGGCCTATTTTCAAGGGGAAGAAATTTATCTGCAAGTATATCAGAAACA
TCTCCAACCTTTTGCACAGTTTATGCTGTGTCAAAGGGAAAACTGTCATCAGTGCGGGCC
TCGAGTACAGACAACAACAGATTCCTTATAGATGATAGCAGTGATACAAGTAGTTCATCT
AACAACTCTACAGGCCACAGCTTTAGCTCACAAGCAGAGAGGATGGATCACAGCTCAACT
TCACCTGCTTCATACTCTCATTTGTACTCTCCTTCTCATCAACCGCAACGTTATCAAGCT
AAATCTCCAGTGCACCAGGCCCTCCAGACACTTCTCCATAAAAGAACACATTTCAGCGAA
AACATCCAATCTAGAAGTTCATCTGTCGATATTGGAGAAGCATTTCAAGCTCTTTCAATT
AAAAGCAATACTCCTTTGCATAAAAGAGCAATTTTGGATGAAGTCATCCATCCTAGAGCT
CTATCTGTTGCTATTGGAGAAGCTGATGATGAAAAAAGTTGCTATTTCAGTAGCTCGGGA
ATTACTGATCTCTATAATCGTGCTTCAAGTTTCAAAAAAGCGAAAGTCGACAACCAATCA
TGGTCAACAAGTCAGTATTCTACCTCAGATGTTCCAACAGATTCTTCATCTGGAAGTCAG
GTTAACATCAATTATGACCTAGAAAAACTGAGAATTGAGCTCAGACATATTCAAGGAATG
TATGCAATAGCCCAAACTGAGGCGATAGATGCTTCTCGGAAGTTGAATGAATTTCAGAAG
CTTCGAGTAGACGAAGCAAATAAACTTAAGCAGATAAACCTTAAAGAGGAGGAAGCGAAA
GAATTGGCAGAGCAAGAGAAGTTAAAATGTGAAGCAGCAAAGAAGGAAGCTGACTATGCA
ATGGAATGTGTTGAAAGAGAAGCTGAGCAAAGAAGAGCAGCAGAGAGCATTGCCAACCGG
GAGGCTAGAACAAAAGAAAAGCTAGAGAAATCATTGGCACTACCTTTGCATCACTACCAG
GAATTCACGTGGGAAGAGATTGTGACGGCTAGCTCATCATTCTCCGAGGATCTTAAAATA
GGAATGGGATCATATGGAATGGTCTACAAGTGCTATTTGCATCATACACCTGCAGCAGTG
AAAGTTCTTCATTCAGCTGAGGCTCATAGAACTAAGCAATTTCAACAAGAGCTTGAAGTA
TTGAGCAAAATTCATCATCCTCACTTGTTATTTCTTCTCGGTGCATGCCCTGAACGTGGT
TGCCTAGTTTATGAGTACATGGAGAATGGAAGTTTGGAGGATAGGTTGACAAGGAAAAAC
AACACACCTCCACTTACATGGTTTGACAGGGTTCGCATAGTGTGGGAAGTTGCTTCAGCT
CTTGTTTTCCTTCATAACACGAAGCCAAATCCGATCATACACCGTGATTTAAAGCCAGCT
AACATACTCCTTGATCACAACTTAGTCAGCAAAATTGGAGATGTTGGTCTTTCAACAATG
GTTCAGTCAGACTCTTCCTCAGCAATGACCGCATATAAAGACACTAGTCCAGTTGGCACA
CTTTGCTATATAGATCCTGAGTATCAAAGGACAGGATTAGTCTCTACAAAATCTGATGTT
TATGCTTTTGGGATGGTCATATTGCAGTTGCTTACTGCAAAAAGAGCCATAGCTTTAGCC
CACATGGTAGAAATGGCTACCGAAGAGGATAAACTGGTGGAGTTGCTGGATCAAGAAGCC
GGTGAATGGCCTCTTGAAGAGACGAAGGAACTGGCTGTACTTGCTCTAAAATGCACTGAA
CTTCGACGTAGAGACAGACCTGACCTGAAAGATGAAGTTCTCCCTATTTTGGAGAGATTT
AAAGAGGTTGCTGATAGAGCTCGACATTCGAAATATAATCAACCTCCACCTCCTAGCCAC
TTCAAATGCCCCCTACTCAAGGAAGTGATTCAAGACCCCTGTGTTGCGGCTGATGGATAC
ACTTATGACCGGAAGGCAATAGAGTCATGGCTCGCGGACAATGATAATTCACCAGTTACA
AATTTACCATTACCACATAAGCACCTGCTTCCAAATTATGCACTTCTCTCAGCTATCAAA
GAGTGGAAGTCAGGGAAACATTGA