Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018575
CDS Infomation

pacid=37477784 polypeptide=PGSC0003DMP400012783 locus=PGSC0003DMG401007209 ID=PGSC0003DMT400018575.v4.03 annot-version=v4.03
Sequence

ATGGGGAATACATGCTCCGGACCCACTTTGAACAAAGATTCAGCAGATTCATCAAAGACA
GATGGAAAAGGCTCTGATTCTAATAATGTCCAGAACACCCCTCCTCCACATCTTCAGATA
CCTGGAGATCAGGATGAAAAATCAACAAATTCCCAAAATGGTGACGACATTGTTGTGGAA
GATGTCAAAAGAAATAATTCTAGTAATCTTAAGCGAGTAATGAGTGCAGGCCTCCAAGTT
GATACTGTTTTAGGACGAAAAACCGGAAATTTGAAAGATATTTATACTTTAGGAAGGAAA
TTAGGACAAGGCCAATTTGGGACAACCTTTTCGTGTGTCGACAAAGCTCAACAAAAAGAA
TTTGCATGTAAATCAATTGCTAAAAGAAAGTTGACAACTGAAGAAGATGTCGAGGATGTA
CGGAGGGAAATTCAGATAATGCATCACTTGGCAGGCCACCCTAGTGTTGTACAGATTGTT
GGGGCTTATGAGGATGCTGTTGCTGTTCATGTTGTAATGGAGCTTTGTGCTGGTGGTGAA
CTTTTCGATAGGATTATAAAGAGAGGCCATTATTCTGAGAAGAAGGCTGCTGAACTTGCA
AGAGTAATAGTAGGTGTTGTAGAAGCATGTCATTCACTCGGTGTTATGCATAGGGACCTC
AAACCTGAGAACTTCCTTTTTGTCAATGAGAAAGAGGAGTCCTCATTGAAGACCATCGAC
TTTGGCTTATCTGTCTTCTTTAGACCAGGTGAAACATTCACTGATGTGGTTGGAAGCCCT
TACTATGTAGCACCAGAAGTCCTGCGCAAGCGTTATGGTCCAGAATGTGATATTTGGAGT
GCTGGAGTAATAATTTATATACTTCTTAGCGGTGTGCCTCCATTTTGGGATGAAACGGAG
CAAGGAATATTTGAACAGATTGTAAAAGGGGAACTTGATTTAGTATCCGAACCTTGGCCA
GCTATATCAGAAAGTGCCAAAGATCTAGTCAGAAAAATGCTTGTGAGAGATCCCAAAAAG
CGGTTGACAGCTCACGAAGTTCTCTGTCACCCATGGGTCCGTGTAGGTGGAGTTGCTCCA
GATAAGCCTCTTGATTCTGCTGTTCTTTCTCGTCTGAATCAATTTTCTGCAATGAATAAA
TTAAAGAAGATAGCAATCAGAGTTATTGCTGAAAATCTATCTGGAGAGGAAATTGCGGGA
TTAAAGCAAATGTTCAAAATGATAGACGCAGATAACAGTGGACATATTACGCTGGAGGAA
CTGAAAAAGGGTTTAGAAAAAGTTGGTTCCAAACTTAAGGATTCAGAAATAAACAGTTTA
ATGCAAGCGGCAGATATGGATAATAGTGGTACCATTGACTATGGCGAGTTTATCGCTGCT
ATGCTCCATCTAAACAAAGTCCAGAAGGAGGATCACATGTATGCCGCTTTTTCATATTTT
GATCAAGATGGTAGTGGATATATCACACAAGAAGAGCTCCAACAGGCTTGTGAGAAGTTT
GGTTTGAGCAATATTCCCATGGAAGAACTTATGCGTGAAGTTGATCAGGATAATGATGGG
CGCATTGACTACAATGAATTTGTAGCAATGATGCAGGATACTGGTTTTGGCAAGAATGGT
AACAAGAGAGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012783
PEP Infomation

pacid=37477784 transcript=PGSC0003DMT400018575 locus=PGSC0003DMG401007209 ID=PGSC0003DMT400018575.v4.03 annot-version=v4.03
Sequence

MGNTCSGPTLNKDSADSSKTDGKGSDSNNVQNTPPPHLQIPGDQDEKSTNSQNGDDIVVE
DVKRNNSSNLKRVMSAGLQVDTVLGRKTGNLKDIYTLGRKLGQGQFGTTFSCVDKAQQKE
FACKSIAKRKLTTEEDVEDVRREIQIMHHLAGHPSVVQIVGAYEDAVAVHVVMELCAGGE
LFDRIIKRGHYSEKKAAELARVIVGVVEACHSLGVMHRDLKPENFLFVNEKEESSLKTID
FGLSVFFRPGETFTDVVGSPYYVAPEVLRKRYGPECDIWSAGVIIYILLSGVPPFWDETE
QGIFEQIVKGELDLVSEPWPAISESAKDLVRKMLVRDPKKRLTAHEVLCHPWVRVGGVAP
DKPLDSAVLSRLNQFSAMNKLKKIAIRVIAENLSGEEIAGLKQMFKMIDADNSGHITLEE
LKKGLEKVGSKLKDSEINSLMQAADMDNSGTIDYGEFIAAMLHLNKVQKEDHMYAAFSYF
DQDGSGYITQEELQQACEKFGLSNIPMEELMREVDQDNDGRIDYNEFVAMMQDTGFGKNG
NKRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400018575
Transcript Infomation

pacid=37477784 locus=PGSC0003DMG401007209 ID=PGSC0003DMT400018575.v4.03 annot-version=v4.03
Sequence

ATGGGGAATACATGCTCCGGACCCACTTTGAACAAAGATTCAGCAGATTCATCAAAGACA
GATGGAAAAGGCTCTGATTCTAATAATGTCCAGAACACCCCTCCTCCACATCTTCAGATA
CCTGGAGATCAGGATGAAAAATCAACAAATTCCCAAAATGGTGACGACATTGTTGTGGAA
GATGTCAAAAGAAATAATTCTAGTAATCTTAAGCGAGTAATGAGTGCAGGCCTCCAAGTT
GATACTGTTTTAGGACGAAAAACCGGAAATTTGAAAGATATTTATACTTTAGGAAGGAAA
TTAGGACAAGGCCAATTTGGGACAACCTTTTCGTGTGTCGACAAAGCTCAACAAAAAGAA
TTTGCATGTAAATCAATTGCTAAAAGAAAGTTGACAACTGAAGAAGATGTCGAGGATGTA
CGGAGGGAAATTCAGATAATGCATCACTTGGCAGGCCACCCTAGTGTTGTACAGATTGTT
GGGGCTTATGAGGATGCTGTTGCTGTTCATGTTGTAATGGAGCTTTGTGCTGGTGGTGAA
CTTTTCGATAGGATTATAAAGAGAGGCCATTATTCTGAGAAGAAGGCTGCTGAACTTGCA
AGAGTAATAGTAGGTGTTGTAGAAGCATGTCATTCACTCGGTGTTATGCATAGGGACCTC
AAACCTGAGAACTTCCTTTTTGTCAATGAGAAAGAGGAGTCCTCATTGAAGACCATCGAC
TTTGGCTTATCTGTCTTCTTTAGACCAGGTGAAACATTCACTGATGTGGTTGGAAGCCCT
TACTATGTAGCACCAGAAGTCCTGCGCAAGCGTTATGGTCCAGAATGTGATATTTGGAGT
GCTGGAGTAATAATTTATATACTTCTTAGCGGTGTGCCTCCATTTTGGGATGAAACGGAG
CAAGGAATATTTGAACAGATTGTAAAAGGGGAACTTGATTTAGTATCCGAACCTTGGCCA
GCTATATCAGAAAGTGCCAAAGATCTAGTCAGAAAAATGCTTGTGAGAGATCCCAAAAAG
CGGTTGACAGCTCACGAAGTTCTCTGTCACCCATGGGTCCGTGTAGGTGGAGTTGCTCCA
GATAAGCCTCTTGATTCTGCTGTTCTTTCTCGTCTGAATCAATTTTCTGCAATGAATAAA
TTAAAGAAGATAGCAATCAGAGTTATTGCTGAAAATCTATCTGGAGAGGAAATTGCGGGA
TTAAAGCAAATGTTCAAAATGATAGACGCAGATAACAGTGGACATATTACGCTGGAGGAA
CTGAAAAAGGGTTTAGAAAAAGTTGGTTCCAAACTTAAGGATTCAGAAATAAACAGTTTA
ATGCAAGCGGCAGATATGGATAATAGTGGTACCATTGACTATGGCGAGTTTATCGCTGCT
ATGCTCCATCTAAACAAAGTCCAGAAGGAGGATCACATGTATGCCGCTTTTTCATATTTT
GATCAAGATGGTAGTGGATATATCACACAAGAAGAGCTCCAACAGGCTTGTGAGAAGTTT
GGTTTGAGCAATATTCCCATGGAAGAACTTATGCGTGAAGTTGATCAGGATAATGATGGG
CGCATTGACTACAATGAATTTGTAGCAATGATGCAGGATACTGGTTTTGGCAAGAATGGT
AACAAGAGAGTGTGA