Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018573
CDS Infomation

pacid=37476434 polypeptide=PGSC0003DMP400012781 locus=PGSC0003DMG400007207 ID=PGSC0003DMT400018573.v4.03 annot-version=v4.03
Sequence

ATGAGTAGCAGGAGAGAAGAAGAGAGGAACGAGAAGATAATAAGAGGGCTTCTCAAGCTC
CCTCCCAATCGCAAATGCATCAACTGCAATAGCTTGGGTCCCCAGTATGTGTGCACAAAC
TTTTGGACCTTTGTCTGCATGACATGCAGCGGAATACATCGTGAGTTTACTCACCGTGTG
AAGTCAGTTTCCATGTCTAAGTTTACTTCCCAAGAAGTGGAAGCTCTTCAACAGGGTGGT
AATCAGCGGGCCAGAGAGATATATTTAAAAAGTTGGGACCCACAAAGTCAGTGGCTTCCT
AATAACAGCAATGTTGATAAAGTGAGGGAATTTATAAAGACCGTCTATGTTGATAAAAAA
TATGCTGGGGCGCAGTCCTCTGATAGACCTCCTAGAGATACCCAGAACTTGAGAAACCAC
GACGATGATATGAGGAGAGCAAGTTCTTATCATTCCTATTCTCAAAGTCCACCATATGAC
TTTCAGTATGAAGAACGGCGTTATGGGAAAAATGCACCAGCACTCTCTAGAAAGCCCGGA
TCAGATCGGGGACTTTACGAAGGAAAGGTGTCGAGTTTCTTGAGTCCTAGTCGTTTAAGT
GATCATATGTATGATGATAGGTTTGGTAATGAAGGATCTAATCCCAGAGCTTCAGATTAC
TCTGTGTCTAGTGGAGGTGATCCATTCAGGTCTGTAGCACAGAGTCCCAACTTTCAGAGA
GGCATCGGAAGTCCCTTAAGTGACACCTCAAGGGATATTTCATATGAAGATATACGGCAT
GCCAAGAAAGATGCTGGAAGAATATTACGAGCACAGAGAACTGCATCTTCTGGAAGTTTT
GAATCGTTTGACAGCAATTCCTTGTCATTCAAGTCTGTAAATTCTGTTGGTTTAGCGGAT
GTTACTTCAGAATCAAAGCAAACAATAGAGACTCACTCTAGTAAATTGTCAACTTTCCCC
TCTTTGCCACAATCATTGGGACCCGGAAATCCAGATGGCCCTGATCTGTTCAATGCTCCC
TCAGTTGCTCAAAACGCTCCACCTACAATTTCAACAAAGTCTCATTTGCCAGTGTCATCA
CCAAATGGCTCCATAGATTTATTTCAGCCATCTATTTCTACTGGTCCAATTGGTAATTCA
CATCAGCCATCGCTCACTCTCCCACCTTCATCTTTGAACTTTTTCTCGGAGGTGCCAAAC
CTGCCTGCTGATGAAAAACCATCATGTGAAGTCACTTCCAAAAATGAAGGATGGGCAACA
TTTGATATGCAGCGGCACACAGCAACAACAGGCATCGAACAGTTCACCCTGGCACCGACA
CCTGCTTATGGCCATACTTCTTTTGACTTTTTACCTGAAAAGACACAGCAACAATCGGTC
ACTGAGAAGTCATTGGATGTGGATCCAGAGAGAAATGATGGATGGGCAACATTTGATGTG
CCTCAGCACGTGACACTCCCTGGAAGTAATAACTTTACCTCCAACAAGATTCAATTAAAG
GGTGATTCTCAACCGAATTCGGACCCAGCTTTCTCTGTCATGCAATGGCCATCACCAATA
GAATCTGCTCCTCATGGACTAGCCGTTAGAGACTCCACTGCTTGTGCATTAAATTTATCA
ATGCCTGCTCCATTTCATGGAGGTGTGCAGAATGTTGAAGCAACTCCAATTGCAAGAAGT
ACTGACTTGTGGAGTGCCTTTGATGTTTCTAATGACCACTTAGCTCTCAAGAGTTTGCCT
AATAGTAAGGAACAAGTTGTAATGAACCATGATCTAGTTGATGATCAGTACATGGGCTTA
AGAGGAGTAGAGAATGTAGCAACAGGTCAAAGTCAAAGAGCTGTGCTGGATAGTGGATAT
CCTATTACTAGTTTTCCATCATATGTCAGTGCCTCGTCCTCTGGATTGTCCACTCTTCCT
GTAGCGACAGGAGTGCATTCACATGCAAATGAGCAGAAGTCCAACAACCCATTTGATCTT
CCTTACGATGCTGACATGGAATGCAGCAATATGCCACAGTACTGGGACATGAGCTCATTA
CAGGCTGCATTGCCAACTGATGGGATGTCATCTTCCTTTGTTGGTGGTGTGACCGAATCT
TGGTTTCTTCAGAACCCAGCAACAACTTATGTTCCTGCTGGACAGCATGGGACATTATTT
GTTTCCTCACAACAATCTGGCAATCAAATATCGAATGTACCGACACATGGGCAAGTTGCT
CCTATTGGCGGAAATCCATTTGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400012781
PEP Infomation

pacid=37476434 transcript=PGSC0003DMT400018573 locus=PGSC0003DMG400007207 ID=PGSC0003DMT400018573.v4.03 annot-version=v4.03
Sequence

MSSRREEERNEKIIRGLLKLPPNRKCINCNSLGPQYVCTNFWTFVCMTCSGIHREFTHRV
KSVSMSKFTSQEVEALQQGGNQRAREIYLKSWDPQSQWLPNNSNVDKVREFIKTVYVDKK
YAGAQSSDRPPRDTQNLRNHDDDMRRASSYHSYSQSPPYDFQYEERRYGKNAPALSRKPG
SDRGLYEGKVSSFLSPSRLSDHMYDDRFGNEGSNPRASDYSVSSGGDPFRSVAQSPNFQR
GIGSPLSDTSRDISYEDIRHAKKDAGRILRAQRTASSGSFESFDSNSLSFKSVNSVGLAD
VTSESKQTIETHSSKLSTFPSLPQSLGPGNPDGPDLFNAPSVAQNAPPTISTKSHLPVSS
PNGSIDLFQPSISTGPIGNSHQPSLTLPPSSLNFFSEVPNLPADEKPSCEVTSKNEGWAT
FDMQRHTATTGIEQFTLAPTPAYGHTSFDFLPEKTQQQSVTEKSLDVDPERNDGWATFDV
PQHVTLPGSNNFTSNKIQLKGDSQPNSDPAFSVMQWPSPIESAPHGLAVRDSTACALNLS
MPAPFHGGVQNVEATPIARSTDLWSAFDVSNDHLALKSLPNSKEQVVMNHDLVDDQYMGL
RGVENVATGQSQRAVLDSGYPITSFPSYVSASSSGLSTLPVATGVHSHANEQKSNNPFDL
PYDADMECSNMPQYWDMSSLQAALPTDGMSSSFVGGVTESWFLQNPATTYVPAGQHGTLF
VSSQQSGNQISNVPTHGQVAPIGGNPFA*

Transcript Sequence

Transcript ID

PGSC0003DMT400018573
Transcript Infomation

pacid=37476434 locus=PGSC0003DMG400007207 ID=PGSC0003DMT400018573.v4.03 annot-version=v4.03
Sequence

ATGAGTAGCAGGAGAGAAGAAGAGAGGAACGAGAAGATAATAAGAGGGCTTCTCAAGCTC
CCTCCCAATCGCAAATGCATCAACTGCAATAGCTTGGGTCCCCAGTATGTGTGCACAAAC
TTTTGGACCTTTGTCTGCATGACATGCAGCGGAATACATCGTGAGTTTACTCACCGTGTG
AAGTCAGTTTCCATGTCTAAGTTTACTTCCCAAGAAGTGGAAGCTCTTCAACAGGGTGGT
AATCAGCGGGCCAGAGAGATATATTTAAAAAGTTGGGACCCACAAAGTCAGTGGCTTCCT
AATAACAGCAATGTTGATAAAGTGAGGGAATTTATAAAGACCGTCTATGTTGATAAAAAA
TATGCTGGGGCGCAGTCCTCTGATAGACCTCCTAGAGATACCCAGAACTTGAGAAACCAC
GACGATGATATGAGGAGAGCAAGTTCTTATCATTCCTATTCTCAAAGTCCACCATATGAC
TTTCAGTATGAAGAACGGCGTTATGGGAAAAATGCACCAGCACTCTCTAGAAAGCCCGGA
TCAGATCGGGGACTTTACGAAGGAAAGGTGTCGAGTTTCTTGAGTCCTAGTCGTTTAAGT
GATCATATGTATGATGATAGGTTTGGTAATGAAGGATCTAATCCCAGAGCTTCAGATTAC
TCTGTGTCTAGTGGAGGTGATCCATTCAGGTCTGTAGCACAGAGTCCCAACTTTCAGAGA
GGCATCGGAAGTCCCTTAAGTGACACCTCAAGGGATATTTCATATGAAGATATACGGCAT
GCCAAGAAAGATGCTGGAAGAATATTACGAGCACAGAGAACTGCATCTTCTGGAAGTTTT
GAATCGTTTGACAGCAATTCCTTGTCATTCAAGTCTGTAAATTCTGTTGGTTTAGCGGAT
GTTACTTCAGAATCAAAGCAAACAATAGAGACTCACTCTAGTAAATTGTCAACTTTCCCC
TCTTTGCCACAATCATTGGGACCCGGAAATCCAGATGGCCCTGATCTGTTCAATGCTCCC
TCAGTTGCTCAAAACGCTCCACCTACAATTTCAACAAAGTCTCATTTGCCAGTGTCATCA
CCAAATGGCTCCATAGATTTATTTCAGCCATCTATTTCTACTGGTCCAATTGGTAATTCA
CATCAGCCATCGCTCACTCTCCCACCTTCATCTTTGAACTTTTTCTCGGAGGTGCCAAAC
CTGCCTGCTGATGAAAAACCATCATGTGAAGTCACTTCCAAAAATGAAGGATGGGCAACA
TTTGATATGCAGCGGCACACAGCAACAACAGGCATCGAACAGTTCACCCTGGCACCGACA
CCTGCTTATGGCCATACTTCTTTTGACTTTTTACCTGAAAAGACACAGCAACAATCGGTC
ACTGAGAAGTCATTGGATGTGGATCCAGAGAGAAATGATGGATGGGCAACATTTGATGTG
CCTCAGCACGTGACACTCCCTGGAAGTAATAACTTTACCTCCAACAAGATTCAATTAAAG
GGTGATTCTCAACCGAATTCGGACCCAGCTTTCTCTGTCATGCAATGGCCATCACCAATA
GAATCTGCTCCTCATGGACTAGCCGTTAGAGACTCCACTGCTTGTGCATTAAATTTATCA
ATGCCTGCTCCATTTCATGGAGGTGTGCAGAATGTTGAAGCAACTCCAATTGCAAGAAGT
ACTGACTTGTGGAGTGCCTTTGATGTTTCTAATGACCACTTAGCTCTCAAGAGTTTGCCT
AATAGTAAGGAACAAGTTGTAATGAACCATGATCTAGTTGATGATCAGTACATGGGCTTA
AGAGGAGTAGAGAATGTAGCAACAGGTCAAAGTCAAAGAGCTGTGCTGGATAGTGGATAT
CCTATTACTAGTTTTCCATCATATGTCAGTGCCTCGTCCTCTGGATTGTCCACTCTTCCT
GTAGCGACAGGAGTGCATTCACATGCAAATGAGCAGAAGTCCAACAACCCATTTGATCTT
CCTTACGATGCTGACATGGAATGCAGCAATATGCCACAGTACTGGGACATGAGCTCATTA
CAGGCTGCATTGCCAACTGATGGGATGTCATCTTCCTTTGTTGGTGGTGTGACCGAATCT
TGGTTTCTTCAGAACCCAGCAACAACTTATGTTCCTGCTGGACAGCATGGGACATTATTT
GTTTCCTCACAACAATCTGGCAATCAAATATCGAATGTACCGACACATGGGCAAGTTGCT
CCTATTGGCGGAAATCCATTTGCATAG