Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018568
CDS Infomation

pacid=37477277 polypeptide=PGSC0003DMP400012776 locus=PGSC0003DMG400007204 ID=PGSC0003DMT400018568.v4.03 annot-version=v4.03
Sequence

ATGGAAGGTGTATCTCCAGACCGGGAATCTGTGGAGTCTGGCGCAAAAAAATCCAGTATA
TCTTCAGGTGGCAGGGTTCATGATCGGAAAGAGTTTCTCCATAGGTTTGTAGATAGTGAA
AGCCTGACCGAAAACCTTAAAACGTGGTATGAAGAAACAATAGAAAATTCAACTCATAAG
GAACCCTCATTTGATGTCCCTTTTGAGTTGATAGATCTTCAAAAGTTCGATTATGCTTTG
GGAGGAGTTCCATTTCAGCAGCTGATTCGTATGCCTAGTGCTGTTTATGCCTCGACTTCT
GGTGCTGCGGAAGCAACTGCTTATCTTGCTCTGGAGGATTTTTTACATGCAAGTGTGAAA
GGTTTGTGGGAGGCATTTTGGGGTCAGGATGAAACTTTGCCTTTCTATGTTTCTTGTGTC
TATAATTCAAACCTGAGATTTTATCAGGCTGAGAAAGCCATTTCGAAAGGGAGGCTAGGA
GGTCTTTGTGCCACAGCTGTAATGCTAAAAAACCCAAGGCATCCACAAGGGAAGTGGGAT
GATATTCTGGAACTTGCTATTCTAAGGTCTGATATTGGAAACCTTGCTACAGAAGAGAAT
GACTGTAAACCTTGTCTCTCAATTTTAGGCGAAGCTTTATTCTTTGCTCTAAGAGTATTG
GTTGCAAGAAGCATCAGCAGATCCAATATTCCTCTCAGTTTGAATTCAGTTTTTGTTCTT
TTAGTTGACACTCAATATGGTGGAGTCCTAAAAGTTGAAGGAGATATACGCAAGTTGGAA
ATGGATTTGAATGATGTATATGGTTGTGCTGCTGAATGGATAAAGAATAATGCTTTAATT
ACCATTTCTCCCATCGATAGGATCTGGAACAAGCTTGGAAATGCTAATTGGGGGGATATT
GGGGCTTTACAGGCACTTTATGCGACCTTCCACTCAATCACACAATATGCTGGAATGTCA
AAGAATTCAATTGAAGATTTGGCTGCGGACCACAGTGCTCGGCTTCAGGCAAGAAGAATT
GAAAGACAATTGGGGGATAGCTGGGTGAATGGAAATGGTTTGTTTCGCTACCAGCAGCGT
AGTGCTTCACCTGAAATTGTTGAAGTACATGAAGAGTCCTTCAGGTTAGAACCTGACAAG
TCCATGAAGCTGGAAATCGGTTCTGTTGTGCTGATAGAAGATTCAAACTGGAAGAAGGAT
TATCAGATAAATGAAGTCCTAACAGATGGAGAAATTCCATATTATATTGCATCTTCTGTC
GAAGATCCTGGTACGACTTCATTTTTATATGTTGGTTCACATCCTTCTCTGCTGGAACCA
GCGTGGGAAGATATGAAGCTGTGGTATCAAGTTCAGAGGCAGACAAAGGTATTGGGTGTT
ATGAAGCAAAAGGAGTTGTCTAGCAAGTATCTACCTCAGTTGAATGCATCTGGGCGGATA
ATTCACCCTGGCCAATGCAGGAGACCAAGCTCGGGCAGTAACTGTGATCGTCAATGGTGT
GGAACTCCAGTTTTAGTGACTAGTCCAGTGGGCAGAACAGTTGCTGATTTGGTGAGACTT
GGCCAATTTGGTTGTGATGAGGCTATTAGATGTTGCCATGACTGCTTATCTGCCCTTTCT
GCTGCTGCCTCAGCTGGCATTCGGCACGGCGATATCAGACCTGAGAATGTTATTTTTGTT
AATTCTGGTGTGAGGCAGCCTTATTTCGTTCTCATTGGTTGGGGACATGCTATTTTAGAA
GAGAGGGATCGTCCTGCAATGAATTTACATTTCTCCTCTACCTATGCCCTTCAAGAAGGG
AAACTGTGCTCAGCCTCTGATGCAGAGAGTCTGGTGTACATGCTTTACTTCTCTTCTGGT
AGTAACATGCCTAATTTGGATTCGGTTGAAGGGGCACTGCAGTGGAGAGAAACCTCTTGG
TCAAAAAGGTTGATCCAACAGAAGCTAGGAGATATTTCTGCTGTCTTGAAAGCATTCGCA
GATTATGTTGACAGCCTCTGTGGAACGCCATATCCGATGAATTTTGATATCTGGCTCACA
AGGTTAAAGAGACATATTCCCGTGGAAGATCATGGAAAGCAGATTGATACCTTGAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012776
PEP Infomation

pacid=37477277 transcript=PGSC0003DMT400018568 locus=PGSC0003DMG400007204 ID=PGSC0003DMT400018568.v4.03 annot-version=v4.03
Sequence

MEGVSPDRESVESGAKKSSISSGGRVHDRKEFLHRFVDSESLTENLKTWYEETIENSTHK
EPSFDVPFELIDLQKFDYALGGVPFQQLIRMPSAVYASTSGAAEATAYLALEDFLHASVK
GLWEAFWGQDETLPFYVSCVYNSNLRFYQAEKAISKGRLGGLCATAVMLKNPRHPQGKWD
DILELAILRSDIGNLATEENDCKPCLSILGEALFFALRVLVARSISRSNIPLSLNSVFVL
LVDTQYGGVLKVEGDIRKLEMDLNDVYGCAAEWIKNNALITISPIDRIWNKLGNANWGDI
GALQALYATFHSITQYAGMSKNSIEDLAADHSARLQARRIERQLGDSWVNGNGLFRYQQR
SASPEIVEVHEESFRLEPDKSMKLEIGSVVLIEDSNWKKDYQINEVLTDGEIPYYIASSV
EDPGTTSFLYVGSHPSLLEPAWEDMKLWYQVQRQTKVLGVMKQKELSSKYLPQLNASGRI
IHPGQCRRPSSGSNCDRQWCGTPVLVTSPVGRTVADLVRLGQFGCDEAIRCCHDCLSALS
AAASAGIRHGDIRPENVIFVNSGVRQPYFVLIGWGHAILEERDRPAMNLHFSSTYALQEG
KLCSASDAESLVYMLYFSSGSNMPNLDSVEGALQWRETSWSKRLIQQKLGDISAVLKAFA
DYVDSLCGTPYPMNFDIWLTRLKRHIPVEDHGKQIDTLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400018568
Transcript Infomation

pacid=37477277 locus=PGSC0003DMG400007204 ID=PGSC0003DMT400018568.v4.03 annot-version=v4.03
Sequence

ATGGAAGGTGTATCTCCAGACCGGGAATCTGTGGAGTCTGGCGCAAAAAAATCCAGTATA
TCTTCAGGTGGCAGGGTTCATGATCGGAAAGAGTTTCTCCATAGGTTTGTAGATAGTGAA
AGCCTGACCGAAAACCTTAAAACGTGGTATGAAGAAACAATAGAAAATTCAACTCATAAG
GAACCCTCATTTGATGTCCCTTTTGAGTTGATAGATCTTCAAAAGTTCGATTATGCTTTG
GGAGGAGTTCCATTTCAGCAGCTGATTCGTATGCCTAGTGCTGTTTATGCCTCGACTTCT
GGTGCTGCGGAAGCAACTGCTTATCTTGCTCTGGAGGATTTTTTACATGCAAGTGTGAAA
GGTTTGTGGGAGGCATTTTGGGGTCAGGATGAAACTTTGCCTTTCTATGTTTCTTGTGTC
TATAATTCAAACCTGAGATTTTATCAGGCTGAGAAAGCCATTTCGAAAGGGAGGCTAGGA
GGTCTTTGTGCCACAGCTGTAATGCTAAAAAACCCAAGGCATCCACAAGGGAAGTGGGAT
GATATTCTGGAACTTGCTATTCTAAGGTCTGATATTGGAAACCTTGCTACAGAAGAGAAT
GACTGTAAACCTTGTCTCTCAATTTTAGGCGAAGCTTTATTCTTTGCTCTAAGAGTATTG
GTTGCAAGAAGCATCAGCAGATCCAATATTCCTCTCAGTTTGAATTCAGTTTTTGTTCTT
TTAGTTGACACTCAATATGGTGGAGTCCTAAAAGTTGAAGGAGATATACGCAAGTTGGAA
ATGGATTTGAATGATGTATATGGTTGTGCTGCTGAATGGATAAAGAATAATGCTTTAATT
ACCATTTCTCCCATCGATAGGATCTGGAACAAGCTTGGAAATGCTAATTGGGGGGATATT
GGGGCTTTACAGGCACTTTATGCGACCTTCCACTCAATCACACAATATGCTGGAATGTCA
AAGAATTCAATTGAAGATTTGGCTGCGGACCACAGTGCTCGGCTTCAGGCAAGAAGAATT
GAAAGACAATTGGGGGATAGCTGGGTGAATGGAAATGGTTTGTTTCGCTACCAGCAGCGT
AGTGCTTCACCTGAAATTGTTGAAGTACATGAAGAGTCCTTCAGGTTAGAACCTGACAAG
TCCATGAAGCTGGAAATCGGTTCTGTTGTGCTGATAGAAGATTCAAACTGGAAGAAGGAT
TATCAGATAAATGAAGTCCTAACAGATGGAGAAATTCCATATTATATTGCATCTTCTGTC
GAAGATCCTGGTACGACTTCATTTTTATATGTTGGTTCACATCCTTCTCTGCTGGAACCA
GCGTGGGAAGATATGAAGCTGTGGTATCAAGTTCAGAGGCAGACAAAGGTATTGGGTGTT
ATGAAGCAAAAGGAGTTGTCTAGCAAGTATCTACCTCAGTTGAATGCATCTGGGCGGATA
ATTCACCCTGGCCAATGCAGGAGACCAAGCTCGGGCAGTAACTGTGATCGTCAATGGTGT
GGAACTCCAGTTTTAGTGACTAGTCCAGTGGGCAGAACAGTTGCTGATTTGGTGAGACTT
GGCCAATTTGGTTGTGATGAGGCTATTAGATGTTGCCATGACTGCTTATCTGCCCTTTCT
GCTGCTGCCTCAGCTGGCATTCGGCACGGCGATATCAGACCTGAGAATGTTATTTTTGTT
AATTCTGGTGTGAGGCAGCCTTATTTCGTTCTCATTGGTTGGGGACATGCTATTTTAGAA
GAGAGGGATCGTCCTGCAATGAATTTACATTTCTCCTCTACCTATGCCCTTCAAGAAGGG
AAACTGTGCTCAGCCTCTGATGCAGAGAGTCTGGTGTACATGCTTTACTTCTCTTCTGGT
AGTAACATGCCTAATTTGGATTCGGTTGAAGGGGCACTGCAGTGGAGAGAAACCTCTTGG
TCAAAAAGGTTGATCCAACAGAAGCTAGGAGATATTTCTGCTGTCTTGAAAGCATTCGCA
GATTATGTTGACAGCCTCTGTGGAACGCCATATCCGATGAATTTTGATATCTGGCTCACA
AGGTTAAAGAGACATATTCCCGTGGAAGATCATGGAAAGCAGATTGATACCTTGAGTTAG