Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018559
CDS Infomation

pacid=37477675 polypeptide=PGSC0003DMP400012774 locus=PGSC0003DMG400007202 ID=PGSC0003DMT400018559.v4.03 annot-version=v4.03
Sequence

ATGGGAGAAGAGAAAAGAGAAGTAGTATTTAGAGACATTAGAAGATATTACTGTGAATTT
TGTGGCCTTTGCCGTTCGAAGAAATCCCTAATTTCCTCTCATATTCAGTCTCATCATCAA
GATGAAATTGAGAGCCGGAAAGATGAAGCAACTGAAAATGCGAAGGACTCAAAAATGAAC
ATTTGTGAGGAATGTGGTGTGAGTTTTCAGAAGCCTGCTCATTTGAAGCAGCATATGCAA
AGTCATTCACTCGAGAGACCATTTGTATGTCATATAGATGACTGTCATTCTAGCTACCGT
AGAAAGGATCACTTGTCAAGACATCTCTTGCTGCACCAAGGGAAGTTGTTTGAGTGTCCT
GTTGATGGCTGCAAAAGCACATTCAGTTTTCAAGGCAACAGGACTCGGCATGTCAAAGAG
ATGCATGATCAATCTGCCTCCGCAGAGGTTGATCTTCCAAAGGAATATGTCTGCTCTGAA
GCTGGATGTGGAAAGGTGTTTAAATATGCATCCAAATTAAGGAAACATGAAGATTCTCAT
GTTAAGCTGGAGACTGTCGAGGCTATGTGTTTAGAGCCAGGGTGTATGAAACATTTCACA
AATGAGAAATGCCTCAAGGAACACATAGAGAGTTGCCACCAACATATTGTTTGTGAAATA
TGTGGGACCAAGCAATTGAAGAAGAATATTAAGCGGCATCTTCGCACACATGAAGAAGGG
CCTATATCAGAGAGAATAAAATGTGAATTCCAGGATTGCCCACACACTTTCTCCACAAGG
TCAAATCTTGCTCAACACATCAAAGCTGTGCATGTGGGAGCTAAACCATTCTCATGTAGC
ATATCTGGTTGTGGTATGAAATTTGCCTTCAAGCATGTGAGAGATAAACATGAACAATCA
GGCTGCCATGTTTATACTCCTGGAGATTTTGAAGAGGCTGATGAGCAATTCCTATCTAGA
CAAAGAGGTGGTAGGAAGAGAGAACCTACTCTTTTTGAGTCAATTATGCGTAAAAGAATT
ACACCGCCTAGTGGTACAGATCCTGTGTTCAATCAGACACCAGAATATCTCTCATGGTTA
GGCTCCATGGAATCGGATAATCAAATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012774
PEP Infomation

pacid=37477675 transcript=PGSC0003DMT400018559 locus=PGSC0003DMG400007202 ID=PGSC0003DMT400018559.v4.03 annot-version=v4.03
Sequence

MGEEKREVVFRDIRRYYCEFCGLCRSKKSLISSHIQSHHQDEIESRKDEATENAKDSKMN
ICEECGVSFQKPAHLKQHMQSHSLERPFVCHIDDCHSSYRRKDHLSRHLLLHQGKLFECP
VDGCKSTFSFQGNRTRHVKEMHDQSASAEVDLPKEYVCSEAGCGKVFKYASKLRKHEDSH
VKLETVEAMCLEPGCMKHFTNEKCLKEHIESCHQHIVCEICGTKQLKKNIKRHLRTHEEG
PISERIKCEFQDCPHTFSTRSNLAQHIKAVHVGAKPFSCSISGCGMKFAFKHVRDKHEQS
GCHVYTPGDFEEADEQFLSRQRGGRKREPTLFESIMRKRITPPSGTDPVFNQTPEYLSWL
GSMESDNQM*

Transcript Sequence

Transcript ID

PGSC0003DMT400018559
Transcript Infomation

pacid=37477675 locus=PGSC0003DMG400007202 ID=PGSC0003DMT400018559.v4.03 annot-version=v4.03
Sequence

ATGGGAGAAGAGAAAAGAGAAGTAGTATTTAGAGACATTAGAAGATATTACTGTGAATTT
TGTGGCCTTTGCCGTTCGAAGAAATCCCTAATTTCCTCTCATATTCAGTCTCATCATCAA
GATGAAATTGAGAGCCGGAAAGATGAAGCAACTGAAAATGCGAAGGACTCAAAAATGAAC
ATTTGTGAGGAATGTGGTGTGAGTTTTCAGAAGCCTGCTCATTTGAAGCAGCATATGCAA
AGTCATTCACTCGAGAGACCATTTGTATGTCATATAGATGACTGTCATTCTAGCTACCGT
AGAAAGGATCACTTGTCAAGACATCTCTTGCTGCACCAAGGGAAGTTGTTTGAGTGTCCT
GTTGATGGCTGCAAAAGCACATTCAGTTTTCAAGGCAACAGGACTCGGCATGTCAAAGAG
ATGCATGATCAATCTGCCTCCGCAGAGGTTGATCTTCCAAAGGAATATGTCTGCTCTGAA
GCTGGATGTGGAAAGGTGTTTAAATATGCATCCAAATTAAGGAAACATGAAGATTCTCAT
GTTAAGCTGGAGACTGTCGAGGCTATGTGTTTAGAGCCAGGGTGTATGAAACATTTCACA
AATGAGAAATGCCTCAAGGAACACATAGAGAGTTGCCACCAACATATTGTTTGTGAAATA
TGTGGGACCAAGCAATTGAAGAAGAATATTAAGCGGCATCTTCGCACACATGAAGAAGGG
CCTATATCAGAGAGAATAAAATGTGAATTCCAGGATTGCCCACACACTTTCTCCACAAGG
TCAAATCTTGCTCAACACATCAAAGCTGTGCATGTGGGAGCTAAACCATTCTCATGTAGC
ATATCTGGTTGTGGTATGAAATTTGCCTTCAAGCATGTGAGAGATAAACATGAACAATCA
GGCTGCCATGTTTATACTCCTGGAGATTTTGAAGAGGCTGATGAGCAATTCCTATCTAGA
CAAAGAGGTGGTAGGAAGAGAGAACCTACTCTTTTTGAGTCAATTATGCGTAAAAGAATT
ACACCGCCTAGTGGTACAGATCCTGTGTTCAATCAGACACCAGAATATCTCTCATGGTTA
GGCTCCATGGAATCGGATAATCAAATGTGA