Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018531
CDS Infomation

pacid=37477479 polypeptide=PGSC0003DMP400012751 locus=PGSC0003DMG400007192 ID=PGSC0003DMT400018531.v4.03 annot-version=v4.03
Sequence

ATGCAGAAAGGAGATGCTGGACCAATTGATCTGGACAAGACAACAACGACATTGGAACCT
GATAAGACGAGCAGTGGGGGTCTTTTTGTTCCTGGGAAAGAGAGAGTAGTTTTTAAACCT
TCAGAACGGAAATCACTTCTAGGGCTTGATGCCTTGGCGATTGCTAAAAGGGGAGGGGCT
ACTGTAGAGAGTGAATTTAAAGTTCCAAGGGAGAGACTTGCTTCATTTGCGTCATCTTTA
GATGAGGATGAAGAGTCATCTGCTGCTTCTGGAATTGATGAGTTGGGACATACTGCATCT
AATGTTTCACGGAATAATGTACAGAGGAGGTATCGTGAATCTTATGCTAGTGAGACATCT
GTTTCAGGTAGTGCAGTAACCTATGAACGGGAAGATGCTGAGACAGTCGTGAGGCCTCAC
TTGAATGAGAACACAGAGGTTCCGGCTGCATCTTCTGGGAGTTTACGTTCTACGATATCT
AGGGGCGAGTCAGTTGACCATGAAAGAGATGGAAGTAAATACAGGGATAATTACAGAAGT
GAAAGCAGGGAAGGGAGAAGGAGAGATAGAAGAACCAGCAGGGAAGAGCACCACTATAGG
GATTCATCACGTGGTTATGAAAGAGAATATGATGGGGATGACGGCAGAAAAAGAAGTAGA
TATGATGGTTTCAGGAGGACTCCTGGAAGATCAGAATGGGATGATGGTAGATGGGAGTGG
CAAGACACCCCTCGTCGTGATAGTCGTTCCAGTAGTAGTAGCAGGCATTATGAGCCTTCA
CCATCACCTAAGTTTCTTGGTGCTTCACCTGATTCTCGACTTGTTTCCCCATGGCTCGGG
GATCATACTCCTCATTCTACTGGAGCTGCTTCTCCGTGGGACAGTGTGGCTCCTTCTCCA
ACTCCAATAAGGGCATCTGGGTCATCTGTAAGATCTTCAAGTTCCAGATATGGTGCAAAA
TCCAGTTTGATTATGTCTTCTACAGGAGGTGCTCTGTCTGAGGACGGAGGAGATGACACA
AATGGTGCCTCTGAAGATCAGAATGAAGAGATTACTGAAAGTATGCGTTTAGAGATGGAG
TATAATTCAGATCGTGCCTGGTATGACCGCGAAGAAGGTAGTACAGTGTTTGAGGGGGAT
GGTTCATCAGCATTTCTAGGTGATGAGGCATCTTTCCAGAAGAAAGAGGTGGAATTGGCC
AAAAAACTGGTTCGTAGAGATGGAAGCAAGATGTCACTTGCTCAAAGTAAAAGGTTATCA
CAGCTCACTGCAGACAATGCTCAATGGGAGGACCGCCAGCTTTTGAGATCTGGAGCTGTT
AGAGGTACCGAGGTGCAGACAGAGTTTGATGATGAGGATGAACGGAAGGTTATTCTTCTT
GTTCACGATACAAAGCCTCCCTTTTTGGATGGAAGAATTGTTTTCACCAAGCAAGCTGAG
CCGATAATGCCAATAAAGGACCCAACGTCAGATATGGCCATAATTTCACGTAAAGGTTCA
GCTCTAGTTCGGGAAATACGTGAAAAACAAAACATGCACAAGTCTCGTCAAAGATTTTGG
GAGCTGGCTGGTTCAAAACTCGGAGATATCCTTGGTGTGGAGAAGAGTGCAGAGCAGGTT
GATGCGGATACTGCTACAGTGGGCGAGGATGGTGAGGTTGATTTTAAAGGAGAAGCTAGA
TTCTCACAGCACTTAAAGAAAGGGGAAGCTGTCAGTGATTTTGCATTATCAAAAACACTT
TCACAGCAAAGGCAGTATCTGCCCATCTTCTCTGTGCGAGATGATTTATTGCAGGTGGTT
CGCGAAAACCAGGTGGTGGTTGTTGTTGGAGAAACTGGTTCTGGAAAGACAACACAGCTA
ACTCAGTACCTTCATGAAGATGGCTATACAAGTAATGGGATTGTTGGTTGCACCCAACCC
AGGCGTGTGGCAGCCATGAGTGTTGCAAAAAGAGTCAGTGAAGAAATGGAAACTGAGCTT
GGTGATAAAGTTGGATATGCCATTCGTTTTGAAGATGTCACTGGGCCAAGTACTGTTATC
AAGTACATGACTGATGGTGTTCTTCTAAGGGAAACACTCAAAGATCCTGATCTTGAAAAA
TATCGTGTAATTGTAATGGATGAGGCCCATGAGAGATCACTTAACACTGATGTCCTTTTT
GGCATTCTTAAGAAGGTTGTGGCTAGGCGACGTGATTTTAAGCTTATTGTCACTTCTGCC
ACTCTGAATGCCCAGAAGTTCTCTAACTTTTTTGGGAGCGTACCAATATTTCACATACCT
GGAAGAACCTTTCCAGTTAATAAATTGTATAGTAAAACCCCATGCGAAGATTATGTCGAA
GCTGCAGTTAAGCAAGCCATGACCATCCATATTACTAGTGCACCGGGTGATATACTCATC
TTCATGACTGGTCAGGATGAGATTGAAGCTACCTGTTATGCACTTTCAGAGCGCATGGAA
CAGCTTACCTCGTCAGCAAAGCAAGCAGTGCCCAATCTATTGATTCTTCCTATATACTCT
CAACTGCCCGCTGATTTGCAAGCAAAAATATTCCAGAAAGCTGAAGACGGGGCTCGAAAA
TGCATTGTTGCTACTAATATTGCTGAAACATCCTTGACTGTCGATGGAATTTACTACGTC
ATTGATACAGGCTATGGTAAAATGAAGGTGTACAATCCTCGTATGGGTATGGATGCTCTG
CAAGTGTTCCCTATTAGTCGAGCTGCAGCTGACCAGCGTGCTGGTCGAGCTGGTAGAACT
GGCCCAGGAACTTGTTACCGGCTTTATACTGAGAATGCGTATGAGAATGAAATGCTGCAA
AGCCCCGTGCCAGAGATTCAACGGACAAATCTTGGGAATGTGGTTTTGCTGCTCAAGTCT
CTCAAAATTCAGAACCTGTTGGATTTTGATTTTATGGACCCACCTCCTCAGGATAACATC
CTTAACTCCATGTATCAGTTGTGGGTATTAGGTGCACTTAACAATGTTGGGGATTTAACA
AGCCTTGGCTGGAAAATGGTGGAGTTCCCATTGGATCCTCCCCTTGCCAAAATGCTCTTG
ATGGGAGAACAACTAGAATGCTTAAATGAGGTTCTGACTATTGTTTCTATGCTTTCAGTG
CCTTCCGTTTTCTTTAGACCCAAGGATAGGGCTGAGGAAAGTGATGCCGCTAGGGAAAAG
TTTTTTGTGCCAGAATCTGATCACCTTACACTGCTTAATGTTTACCAGCAATGGAAAGCT
AATCAATACAGGGGGGACTGGTGTAATGACCACTTTTTACAGGTCAAAGGTCTGCGCAAG
GCTAGGGAAGTAAGGTCTCAATTGCTGGATATCCTCAAGACACTTAAAATTCCACTCACT
TCCTGTGGTCCTGATTGGGATGTTGTAAGGAAAGCCATCTGCTCTGCCTACTTCCATAAT
GCAGCTAGGCTGAAAGGAGTTGGGGAATATGTTAATTGCAGGAATGGAATGCCTTGCCAC
CTTCATCCCACTAGTGCTCTCTATGGATTGGGTTACACTCCTGATAACGTGGTTTATCAT
GAGCTTATCTTGACATCAAAGGAGTACATGCAGTGTGTGACAGCTGTGGAGCCTCACTGG
TTGGCTGAACTGGGGCCCATGTTTTTCTCCGTGAAAGATTCTGATACATCAATGCTGGAA
CATAAAAAGAAACAGAAAGAGGAGAAAACTGCCATGGAGGAAGAAATGGAGAAGTTGCGT
ACAGTACAGGCTGAAGCTGAGAGACGAAACAAGGAGAAGGAGAAGGAAAAGAGAGCAAAA
GAACTGCAACAGGTTTCTATGCCTGGTTTGAAGAAAGGCTCGACTACTTATTTACGACCT
AAGAGGCTCGGTCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012751
PEP Infomation

pacid=37477479 transcript=PGSC0003DMT400018531 locus=PGSC0003DMG400007192 ID=PGSC0003DMT400018531.v4.03 annot-version=v4.03
Sequence

MQKGDAGPIDLDKTTTTLEPDKTSSGGLFVPGKERVVFKPSERKSLLGLDALAIAKRGGA
TVESEFKVPRERLASFASSLDEDEESSAASGIDELGHTASNVSRNNVQRRYRESYASETS
VSGSAVTYEREDAETVVRPHLNENTEVPAASSGSLRSTISRGESVDHERDGSKYRDNYRS
ESREGRRRDRRTSREEHHYRDSSRGYEREYDGDDGRKRSRYDGFRRTPGRSEWDDGRWEW
QDTPRRDSRSSSSSRHYEPSPSPKFLGASPDSRLVSPWLGDHTPHSTGAASPWDSVAPSP
TPIRASGSSVRSSSSRYGAKSSLIMSSTGGALSEDGGDDTNGASEDQNEEITESMRLEME
YNSDRAWYDREEGSTVFEGDGSSAFLGDEASFQKKEVELAKKLVRRDGSKMSLAQSKRLS
QLTADNAQWEDRQLLRSGAVRGTEVQTEFDDEDERKVILLVHDTKPPFLDGRIVFTKQAE
PIMPIKDPTSDMAIISRKGSALVREIREKQNMHKSRQRFWELAGSKLGDILGVEKSAEQV
DADTATVGEDGEVDFKGEARFSQHLKKGEAVSDFALSKTLSQQRQYLPIFSVRDDLLQVV
RENQVVVVVGETGSGKTTQLTQYLHEDGYTSNGIVGCTQPRRVAAMSVAKRVSEEMETEL
GDKVGYAIRFEDVTGPSTVIKYMTDGVLLRETLKDPDLEKYRVIVMDEAHERSLNTDVLF
GILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFHIPGRTFPVNKLYSKTPCEDYVE
AAVKQAMTIHITSAPGDILIFMTGQDEIEATCYALSERMEQLTSSAKQAVPNLLILPIYS
QLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVYNPRMGMDAL
QVFPISRAAADQRAGRAGRTGPGTCYRLYTENAYENEMLQSPVPEIQRTNLGNVVLLLKS
LKIQNLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGDLTSLGWKMVEFPLDPPLAKMLL
MGEQLECLNEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKA
NQYRGDWCNDHFLQVKGLRKAREVRSQLLDILKTLKIPLTSCGPDWDVVRKAICSAYFHN
AARLKGVGEYVNCRNGMPCHLHPTSALYGLGYTPDNVVYHELILTSKEYMQCVTAVEPHW
LAELGPMFFSVKDSDTSMLEHKKKQKEEKTAMEEEMEKLRTVQAEAERRNKEKEKEKRAK
ELQQVSMPGLKKGSTTYLRPKRLGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400018531
Transcript Infomation

pacid=37477479 locus=PGSC0003DMG400007192 ID=PGSC0003DMT400018531.v4.03 annot-version=v4.03
Sequence

ATGCAGAAAGGAGATGCTGGACCAATTGATCTGGACAAGACAACAACGACATTGGAACCT
GATAAGACGAGCAGTGGGGGTCTTTTTGTTCCTGGGAAAGAGAGAGTAGTTTTTAAACCT
TCAGAACGGAAATCACTTCTAGGGCTTGATGCCTTGGCGATTGCTAAAAGGGGAGGGGCT
ACTGTAGAGAGTGAATTTAAAGTTCCAAGGGAGAGACTTGCTTCATTTGCGTCATCTTTA
GATGAGGATGAAGAGTCATCTGCTGCTTCTGGAATTGATGAGTTGGGACATACTGCATCT
AATGTTTCACGGAATAATGTACAGAGGAGGTATCGTGAATCTTATGCTAGTGAGACATCT
GTTTCAGGTAGTGCAGTAACCTATGAACGGGAAGATGCTGAGACAGTCGTGAGGCCTCAC
TTGAATGAGAACACAGAGGTTCCGGCTGCATCTTCTGGGAGTTTACGTTCTACGATATCT
AGGGGCGAGTCAGTTGACCATGAAAGAGATGGAAGTAAATACAGGGATAATTACAGAAGT
GAAAGCAGGGAAGGGAGAAGGAGAGATAGAAGAACCAGCAGGGAAGAGCACCACTATAGG
GATTCATCACGTGGTTATGAAAGAGAATATGATGGGGATGACGGCAGAAAAAGAAGTAGA
TATGATGGTTTCAGGAGGACTCCTGGAAGATCAGAATGGGATGATGGTAGATGGGAGTGG
CAAGACACCCCTCGTCGTGATAGTCGTTCCAGTAGTAGTAGCAGGCATTATGAGCCTTCA
CCATCACCTAAGTTTCTTGGTGCTTCACCTGATTCTCGACTTGTTTCCCCATGGCTCGGG
GATCATACTCCTCATTCTACTGGAGCTGCTTCTCCGTGGGACAGTGTGGCTCCTTCTCCA
ACTCCAATAAGGGCATCTGGGTCATCTGTAAGATCTTCAAGTTCCAGATATGGTGCAAAA
TCCAGTTTGATTATGTCTTCTACAGGAGGTGCTCTGTCTGAGGACGGAGGAGATGACACA
AATGGTGCCTCTGAAGATCAGAATGAAGAGATTACTGAAAGTATGCGTTTAGAGATGGAG
TATAATTCAGATCGTGCCTGGTATGACCGCGAAGAAGGTAGTACAGTGTTTGAGGGGGAT
GGTTCATCAGCATTTCTAGGTGATGAGGCATCTTTCCAGAAGAAAGAGGTGGAATTGGCC
AAAAAACTGGTTCGTAGAGATGGAAGCAAGATGTCACTTGCTCAAAGTAAAAGGTTATCA
CAGCTCACTGCAGACAATGCTCAATGGGAGGACCGCCAGCTTTTGAGATCTGGAGCTGTT
AGAGGTACCGAGGTGCAGACAGAGTTTGATGATGAGGATGAACGGAAGGTTATTCTTCTT
GTTCACGATACAAAGCCTCCCTTTTTGGATGGAAGAATTGTTTTCACCAAGCAAGCTGAG
CCGATAATGCCAATAAAGGACCCAACGTCAGATATGGCCATAATTTCACGTAAAGGTTCA
GCTCTAGTTCGGGAAATACGTGAAAAACAAAACATGCACAAGTCTCGTCAAAGATTTTGG
GAGCTGGCTGGTTCAAAACTCGGAGATATCCTTGGTGTGGAGAAGAGTGCAGAGCAGGTT
GATGCGGATACTGCTACAGTGGGCGAGGATGGTGAGGTTGATTTTAAAGGAGAAGCTAGA
TTCTCACAGCACTTAAAGAAAGGGGAAGCTGTCAGTGATTTTGCATTATCAAAAACACTT
TCACAGCAAAGGCAGTATCTGCCCATCTTCTCTGTGCGAGATGATTTATTGCAGGTGGTT
CGCGAAAACCAGGTGGTGGTTGTTGTTGGAGAAACTGGTTCTGGAAAGACAACACAGCTA
ACTCAGTACCTTCATGAAGATGGCTATACAAGTAATGGGATTGTTGGTTGCACCCAACCC
AGGCGTGTGGCAGCCATGAGTGTTGCAAAAAGAGTCAGTGAAGAAATGGAAACTGAGCTT
GGTGATAAAGTTGGATATGCCATTCGTTTTGAAGATGTCACTGGGCCAAGTACTGTTATC
AAGTACATGACTGATGGTGTTCTTCTAAGGGAAACACTCAAAGATCCTGATCTTGAAAAA
TATCGTGTAATTGTAATGGATGAGGCCCATGAGAGATCACTTAACACTGATGTCCTTTTT
GGCATTCTTAAGAAGGTTGTGGCTAGGCGACGTGATTTTAAGCTTATTGTCACTTCTGCC
ACTCTGAATGCCCAGAAGTTCTCTAACTTTTTTGGGAGCGTACCAATATTTCACATACCT
GGAAGAACCTTTCCAGTTAATAAATTGTATAGTAAAACCCCATGCGAAGATTATGTCGAA
GCTGCAGTTAAGCAAGCCATGACCATCCATATTACTAGTGCACCGGGTGATATACTCATC
TTCATGACTGGTCAGGATGAGATTGAAGCTACCTGTTATGCACTTTCAGAGCGCATGGAA
CAGCTTACCTCGTCAGCAAAGCAAGCAGTGCCCAATCTATTGATTCTTCCTATATACTCT
CAACTGCCCGCTGATTTGCAAGCAAAAATATTCCAGAAAGCTGAAGACGGGGCTCGAAAA
TGCATTGTTGCTACTAATATTGCTGAAACATCCTTGACTGTCGATGGAATTTACTACGTC
ATTGATACAGGCTATGGTAAAATGAAGGTGTACAATCCTCGTATGGGTATGGATGCTCTG
CAAGTGTTCCCTATTAGTCGAGCTGCAGCTGACCAGCGTGCTGGTCGAGCTGGTAGAACT
GGCCCAGGAACTTGTTACCGGCTTTATACTGAGAATGCGTATGAGAATGAAATGCTGCAA
AGCCCCGTGCCAGAGATTCAACGGACAAATCTTGGGAATGTGGTTTTGCTGCTCAAGTCT
CTCAAAATTCAGAACCTGTTGGATTTTGATTTTATGGACCCACCTCCTCAGGATAACATC
CTTAACTCCATGTATCAGTTGTGGGTATTAGGTGCACTTAACAATGTTGGGGATTTAACA
AGCCTTGGCTGGAAAATGGTGGAGTTCCCATTGGATCCTCCCCTTGCCAAAATGCTCTTG
ATGGGAGAACAACTAGAATGCTTAAATGAGGTTCTGACTATTGTTTCTATGCTTTCAGTG
CCTTCCGTTTTCTTTAGACCCAAGGATAGGGCTGAGGAAAGTGATGCCGCTAGGGAAAAG
TTTTTTGTGCCAGAATCTGATCACCTTACACTGCTTAATGTTTACCAGCAATGGAAAGCT
AATCAATACAGGGGGGACTGGTGTAATGACCACTTTTTACAGGTCAAAGGTCTGCGCAAG
GCTAGGGAAGTAAGGTCTCAATTGCTGGATATCCTCAAGACACTTAAAATTCCACTCACT
TCCTGTGGTCCTGATTGGGATGTTGTAAGGAAAGCCATCTGCTCTGCCTACTTCCATAAT
GCAGCTAGGCTGAAAGGAGTTGGGGAATATGTTAATTGCAGGAATGGAATGCCTTGCCAC
CTTCATCCCACTAGTGCTCTCTATGGATTGGGTTACACTCCTGATAACGTGGTTTATCAT
GAGCTTATCTTGACATCAAAGGAGTACATGCAGTGTGTGACAGCTGTGGAGCCTCACTGG
TTGGCTGAACTGGGGCCCATGTTTTTCTCCGTGAAAGATTCTGATACATCAATGCTGGAA
CATAAAAAGAAACAGAAAGAGGAGAAAACTGCCATGGAGGAAGAAATGGAGAAGTTGCGT
ACAGTACAGGCTGAAGCTGAGAGACGAAACAAGGAGAAGGAGAAGGAAAAGAGAGCAAAA
GAACTGCAACAGGTTTCTATGCCTGGTTTGAAGAAAGGCTCGACTACTTATTTACGACCT
AAGAGGCTCGGTCTGTAA