Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018516
CDS Infomation

pacid=37476908 polypeptide=PGSC0003DMP400012742 locus=PGSC0003DMG400007187 ID=PGSC0003DMT400018516.v4.03 annot-version=v4.03
Sequence

ATGGTTCGTGAGAAACATAAACCTCTGAAGCTTTATCAGGTTTGGAAGGGAAGTAATAAA
TTCTTATTGGGAGGAAGATTGATCTTCGGTCCGGATGTGTCATCGTTGTTTCTATCAACA
CTTTTAATTGCTGGCCCAGCACTTGCTTTTTGTATAAAAGTCTCTTGTGTAATCAGACAT
CGTATCAAAGAGCACAAAGATGCTGGTCCTTGGTATCCTATACTTGTAATTGGAGCAGTT
CTTACCATTATGGATATAGTTTTTCTCTTTTTGACATCTAGTAGAGATCCTGGAATTGTC
CCACGAAACACAACCCCTCCTGAATCGGACGAAACATTTGATATACATACCCCTTCCATG
GAGTGGGTCAACGGTAGAACTCCTCATTTGAAACTTCCACGAGCAAAGGATGTAATCGTG
AATGGACACACAGTTAAAGTCAAGTACTGTGATACATGTTTGCTGTACCGGCCTCCTCGT
TCCTCTCATTGTTCGATCTGCAACAATTGTGTTCAAAGATTTGATCACCACTGTCCCTGG
GTTGGTCAGTGCATTGGGCTTCGGAATTACAGATTCTTCTATTTGTTCATATCTACATCA
ACTATATTATGCATATATGTCTTTGTCATATCCTTGGTCAATATCCTTCATCATGGCGGC
AACTTATGGAGAGCTATTTCACAAGATATCTTGTCGGATGTTCTCATTATATACTGCTTC
ATTGCTGTTTGGTTTGTTGGCGGCCTTGCTATTTTCCATTTTTACCTGATTAGCACTAAC
CAGACTACTTACGAGAACTTTAGGTATCGATATGATAAGAAGGAGAATCCCTATAATAGG
GGGACAATTGAAAATATCAGAGAAGTTTTCTTTTCCAAGATCCCACCTTCCTTAAATAAT
TTTCGAGCAGTTTTTAAAGAAAATGACATTGTAATGGTTGAGCCAGCAACTTCCAACTTT
GTGGGAAATATCAATAGCTCAAAAGAGAAGATAGATATTGAGATGGGAACAATGTTTCCA
GAGGATAGTGGACTTTCACTTCCTGAAATTTTGCGGAATTTGGAATATGAGGAGATAGAT
GATACTTTAAAAAGCAGGGAATGGACCAGAGATGCTTATTCTGATTCTGGTGAGCATATG
CGGAGCATCACCAGCTTAAAGGAGACAATTGATATTGAGGTGGGAGATAACTTTGCAGAA
GATAAAGGAACTGCACAGGCAGAAATTTCGCAGAATATGAATGGCAATAGCATGAAGAAA
AATTTCAAAAACAAGGATGAAGGTGGGAGAACTGATTATGAACCTTTTTGGTTTTCACTT
GAACAAGAAAAAGAAAGTGTAAAGAGCTCCACTCTAGGAAGTGCATCTAATGTAGAAGAG
AACTCGGAAGAAGTAAGTAGCTCGGCTCTGTATATGACACCAATAAATGATCGTAGCCCA
AAGGTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400012742
PEP Infomation

pacid=37476908 transcript=PGSC0003DMT400018516 locus=PGSC0003DMG400007187 ID=PGSC0003DMT400018516.v4.03 annot-version=v4.03
Sequence

MVREKHKPLKLYQVWKGSNKFLLGGRLIFGPDVSSLFLSTLLIAGPALAFCIKVSCVIRH
RIKEHKDAGPWYPILVIGAVLTIMDIVFLFLTSSRDPGIVPRNTTPPESDETFDIHTPSM
EWVNGRTPHLKLPRAKDVIVNGHTVKVKYCDTCLLYRPPRSSHCSICNNCVQRFDHHCPW
VGQCIGLRNYRFFYLFISTSTILCIYVFVISLVNILHHGGNLWRAISQDILSDVLIIYCF
IAVWFVGGLAIFHFYLISTNQTTYENFRYRYDKKENPYNRGTIENIREVFFSKIPPSLNN
FRAVFKENDIVMVEPATSNFVGNINSSKEKIDIEMGTMFPEDSGLSLPEILRNLEYEEID
DTLKSREWTRDAYSDSGEHMRSITSLKETIDIEVGDNFAEDKGTAQAEISQNMNGNSMKK
NFKNKDEGGRTDYEPFWFSLEQEKESVKSSTLGSASNVEENSEEVSSSALYMTPINDRSP
KV*

Transcript Sequence

Transcript ID

PGSC0003DMT400018516
Transcript Infomation

pacid=37476908 locus=PGSC0003DMG400007187 ID=PGSC0003DMT400018516.v4.03 annot-version=v4.03
Sequence

ATGGTTCGTGAGAAACATAAACCTCTGAAGCTTTATCAGGTTTGGAAGGGAAGTAATAAA
TTCTTATTGGGAGGAAGATTGATCTTCGGTCCGGATGTGTCATCGTTGTTTCTATCAACA
CTTTTAATTGCTGGCCCAGCACTTGCTTTTTGTATAAAAGTCTCTTGTGTAATCAGACAT
CGTATCAAAGAGCACAAAGATGCTGGTCCTTGGTATCCTATACTTGTAATTGGAGCAGTT
CTTACCATTATGGATATAGTTTTTCTCTTTTTGACATCTAGTAGAGATCCTGGAATTGTC
CCACGAAACACAACCCCTCCTGAATCGGACGAAACATTTGATATACATACCCCTTCCATG
GAGTGGGTCAACGGTAGAACTCCTCATTTGAAACTTCCACGAGCAAAGGATGTAATCGTG
AATGGACACACAGTTAAAGTCAAGTACTGTGATACATGTTTGCTGTACCGGCCTCCTCGT
TCCTCTCATTGTTCGATCTGCAACAATTGTGTTCAAAGATTTGATCACCACTGTCCCTGG
GTTGGTCAGTGCATTGGGCTTCGGAATTACAGATTCTTCTATTTGTTCATATCTACATCA
ACTATATTATGCATATATGTCTTTGTCATATCCTTGGTCAATATCCTTCATCATGGCGGC
AACTTATGGAGAGCTATTTCACAAGATATCTTGTCGGATGTTCTCATTATATACTGCTTC
ATTGCTGTTTGGTTTGTTGGCGGCCTTGCTATTTTCCATTTTTACCTGATTAGCACTAAC
CAGACTACTTACGAGAACTTTAGGTATCGATATGATAAGAAGGAGAATCCCTATAATAGG
GGGACAATTGAAAATATCAGAGAAGTTTTCTTTTCCAAGATCCCACCTTCCTTAAATAAT
TTTCGAGCAGTTTTTAAAGAAAATGACATTGTAATGGTTGAGCCAGCAACTTCCAACTTT
GTGGGAAATATCAATAGCTCAAAAGAGAAGATAGATATTGAGATGGGAACAATGTTTCCA
GAGGATAGTGGACTTTCACTTCCTGAAATTTTGCGGAATTTGGAATATGAGGAGATAGAT
GATACTTTAAAAAGCAGGGAATGGACCAGAGATGCTTATTCTGATTCTGGTGAGCATATG
CGGAGCATCACCAGCTTAAAGGAGACAATTGATATTGAGGTGGGAGATAACTTTGCAGAA
GATAAAGGAACTGCACAGGCAGAAATTTCGCAGAATATGAATGGCAATAGCATGAAGAAA
AATTTCAAAAACAAGGATGAAGGTGGGAGAACTGATTATGAACCTTTTTGGTTTTCACTT
GAACAAGAAAAAGAAAGTGTAAAGAGCTCCACTCTAGGAAGTGCATCTAATGTAGAAGAG
AACTCGGAAGAAGTAAGTAGCTCGGCTCTGTATATGACACCAATAAATGATCGTAGCCCA
AAGGTATAG