Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018498
CDS Infomation

pacid=37479993 polypeptide=PGSC0003DMP400012731 locus=PGSC0003DMG400007181 ID=PGSC0003DMT400018498.v4.03 annot-version=v4.03
Sequence

ATGGCTTTTCCTTTAGTACTCTCTCTATCAGTATTTATCATCTTTTTATGTTACAAACTC
TACAACCGGCTCACGGCCAAGCTGCCTCCGGGTCCTTGGCCGTGGCCGGTGATTGGAAAC
CTCTTCAGCATAACGCCGATGAGGTTCCGATGCTTTGCTGAATGGGCCCAAATTTATGGG
CCAATTTTTTCTTTTTACCTTGGGTCACAACTAAACGTGGTGGTGAATAATGCGGAACTT
GCAAAAGAAGTTCTTAAAGATAATGATCAAAATTTGGCCAATAGGTTTAGAACAAAACCT
CTTGATAGTGTGAGTAAAAATGGGATGGATTTGATATGGGCTGATTATGGACCTCATTAT
GTGAAAGTAAGAAAGCTTTGTAATCTTGAACTTTTTACTCAAAAGAGACTTGAAGCTCTT
AGGCCAATTAGAGAAGTTGAAGTTACTGCCATGGTTGAAAATATTTTCAAGGACACCACT
AAGCCTGGTAATGATAGTAAAACAATGACGCTAAGGGGCTACTTGGGATTAGTGTCATTC
AACAACATAACAAGGCTTACATTTGGGAAGAGATTTATAAACTCAAAAGGTGAAGTTGAT
GAACAAGGTGAAGAGCTCAGAGCCATTTTAACAGATGGGATAAGAATTTCAGGAAAACCT
AATTTGGGAGAATTTGTACCATGGCTACGTTGGGTATTTAAAGATGACAATGAAGCTCTT
GAGTCACAAGATAGACGTTTGAATAAATTTACAAGACTTATAATGGAAGAACACACAATT
GCTAGAGAAAAATCTGGAGAAACCAAACATCATTTTGTTGATGCTTTGCTTACCCTTCAA
AAGGAGTATGATCTTAGCGATGACTCTATTATTAGCCTTTTTTGGGTAAGTATACATATA
CTAGTTAATATAATTTTAACTTTTATACACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012731
PEP Infomation

pacid=37479993 transcript=PGSC0003DMT400018498 locus=PGSC0003DMG400007181 ID=PGSC0003DMT400018498.v4.03 annot-version=v4.03
Sequence

MAFPLVLSLSVFIIFLCYKLYNRLTAKLPPGPWPWPVIGNLFSITPMRFRCFAEWAQIYG
PIFSFYLGSQLNVVVNNAELAKEVLKDNDQNLANRFRTKPLDSVSKNGMDLIWADYGPHY
VKVRKLCNLELFTQKRLEALRPIREVEVTAMVENIFKDTTKPGNDSKTMTLRGYLGLVSF
NNITRLTFGKRFINSKGEVDEQGEELRAILTDGIRISGKPNLGEFVPWLRWVFKDDNEAL
ESQDRRLNKFTRLIMEEHTIAREKSGETKHHFVDALLTLQKEYDLSDDSIISLFWVSIHI
LVNIILTFIH*

Transcript Sequence

Transcript ID

PGSC0003DMT400018498
Transcript Infomation

pacid=37479993 locus=PGSC0003DMG400007181 ID=PGSC0003DMT400018498.v4.03 annot-version=v4.03
Sequence

ATGGCTTTTCCTTTAGTACTCTCTCTATCAGTATTTATCATCTTTTTATGTTACAAACTC
TACAACCGGCTCACGGCCAAGCTGCCTCCGGGTCCTTGGCCGTGGCCGGTGATTGGAAAC
CTCTTCAGCATAACGCCGATGAGGTTCCGATGCTTTGCTGAATGGGCCCAAATTTATGGG
CCAATTTTTTCTTTTTACCTTGGGTCACAACTAAACGTGGTGGTGAATAATGCGGAACTT
GCAAAAGAAGTTCTTAAAGATAATGATCAAAATTTGGCCAATAGGTTTAGAACAAAACCT
CTTGATAGTGTGAGTAAAAATGGGATGGATTTGATATGGGCTGATTATGGACCTCATTAT
GTGAAAGTAAGAAAGCTTTGTAATCTTGAACTTTTTACTCAAAAGAGACTTGAAGCTCTT
AGGCCAATTAGAGAAGTTGAAGTTACTGCCATGGTTGAAAATATTTTCAAGGACACCACT
AAGCCTGGTAATGATAGTAAAACAATGACGCTAAGGGGCTACTTGGGATTAGTGTCATTC
AACAACATAACAAGGCTTACATTTGGGAAGAGATTTATAAACTCAAAAGGTGAAGTTGAT
GAACAAGGTGAAGAGCTCAGAGCCATTTTAACAGATGGGATAAGAATTTCAGGAAAACCT
AATTTGGGAGAATTTGTACCATGGCTACGTTGGGTATTTAAAGATGACAATGAAGCTCTT
GAGTCACAAGATAGACGTTTGAATAAATTTACAAGACTTATAATGGAAGAACACACAATT
GCTAGAGAAAAATCTGGAGAAACCAAACATCATTTTGTTGATGCTTTGCTTACCCTTCAA
AAGGAGTATGATCTTAGCGATGACTCTATTATTAGCCTTTTTTGGGTAAGTATACATATA
CTAGTTAATATAATTTTAACTTTTATACACTGA