Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018493
CDS Infomation

pacid=37476863 polypeptide=PGSC0003DMP400012728 locus=PGSC0003DMG400007178 ID=PGSC0003DMT400018493.v4.03 annot-version=v4.03
Sequence

ATGGCTTTATTTTTAATTCTAACTTCAATAGCCCTAATTTTCGTAGCTCATAAACTCTAC
CACCGTCTCCGATTCAAATTACCACCAGGTCCACGGCCGTTACCGGTGGTCGGAAACCTG
TACGACATAAAACCAGTGAGATTCCGATGCTTCGCCGATTGGGCCCAAACTTACGGCCCA
ATTTTCTCAGTATACTTTGGTTCACAGCTAAACGTTGTGGTAACAACAGCTGAATTAGCT
AAACAAGTATTGAAAGAAAATGATCAGAATTTAGCAGATCGATTTAGAACTAGACCTGCT
AATAATTTGAGTAGAAATGGGATGGATTTGATTTGGGCAGATTATGGGCCTCATTATGTG
AAAGTAAGAAAGCTTTGTAATCTTGAACTTTTTACTCCAAAAAGACTTGAATCTCTTAGA
CCTATCAGAGAAGAAGAAGTTACTGCCATGGTGGAAAATATTTTCAATGACTCTACTAAG
CCTGATAATACTGGTAAAAGCCTGTTGATGAGAGAGTACTTAGGATCAGTAGCATTCAAC
AACATTACAAGGCTAACTTTTGGTAAAAGATTCATGAATGCAGCAGGTGAGATTGATGAA
CAAGGCCAAGAATTTAAGGGCATTGTATCTAATGGCATCAAAATCGGTGGAAAACTTCCC
TTGGCAGAGTATGTTCCATGGCTCCGTTGGTTTTTCTCAATGGAAAACGAGGCACTCGTC
AAACACTCTGAACGTAGAGATCGGTTAACAAGAATTATCATGGACGAACACACTTTGGCT
CGCAAACAAACTGGTGATACTAAGCAGCATTTCGTTGATGCCTTGCTTACTCTTCAGAAG
CAGTATGATCTTAGTGATGACACTGTTATCGGCCTCCTCTGGGATATGATTACAGCAGGA
ATGGACACAACAACCATAACCGTAGAATGGGCAATGGCAGAGCTAGTTAGGAACCCAAGG
GTGCAACAAAAGGCTCAAGAAGAGCTTGACAGGGTAATTGGATCGGACCGAATCATGTCA
GAAACTGATTTCTCTGGACTTCCTTACCTTCAATGTGTAGCCAAAGAGGCTCTAAGGTTG
CACCCACCAACTCCCCTAATGCTTCCACATAAGGCCAGTGCCAGTGTCAAAATCGGCGGT
TATGACATTCCTAAGGGAGCCATTGTGCACGTGAATGTTTGGGCTGTGGCTCGTGATCCA
GCAGTGTGGAAGGACCCATTGGAGTTCAGACCAGAACGCTTCCTTGAGGAAGACGTTGAC
ATGAAGGGACACGACTATCGGCTACTACCATTTGGTGCAGGAAGGCGTGTTTGCCCTGGT
GCACAACTTGCTATCAACTTGGTCACTTCTATGTTGGGTCATTTGTTGCATCATTTTACA
TGGTCTCCGCCCCCGGGTGTTAGCCCGGAGGATATCGACTTGACGGAGAACCCCGGAACA
GTTACTTACATGAAAAATCCAATACAAGCTATTCCTACTCCAAGATTGCCTGCACACTTG
TATAAACGTGTGCCAATGGATATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012728
PEP Infomation

pacid=37476863 transcript=PGSC0003DMT400018493 locus=PGSC0003DMG400007178 ID=PGSC0003DMT400018493.v4.03 annot-version=v4.03
Sequence

MALFLILTSIALIFVAHKLYHRLRFKLPPGPRPLPVVGNLYDIKPVRFRCFADWAQTYGP
IFSVYFGSQLNVVVTTAELAKQVLKENDQNLADRFRTRPANNLSRNGMDLIWADYGPHYV
KVRKLCNLELFTPKRLESLRPIREEEVTAMVENIFNDSTKPDNTGKSLLMREYLGSVAFN
NITRLTFGKRFMNAAGEIDEQGQEFKGIVSNGIKIGGKLPLAEYVPWLRWFFSMENEALV
KHSERRDRLTRIIMDEHTLARKQTGDTKQHFVDALLTLQKQYDLSDDTVIGLLWDMITAG
MDTTTITVEWAMAELVRNPRVQQKAQEELDRVIGSDRIMSETDFSGLPYLQCVAKEALRL
HPPTPLMLPHKASASVKIGGYDIPKGAIVHVNVWAVARDPAVWKDPLEFRPERFLEEDVD
MKGHDYRLLPFGAGRRVCPGAQLAINLVTSMLGHLLHHFTWSPPPGVSPEDIDLTENPGT
VTYMKNPIQAIPTPRLPAHLYKRVPMDM*

Transcript Sequence

Transcript ID

PGSC0003DMT400018493
Transcript Infomation

pacid=37476863 locus=PGSC0003DMG400007178 ID=PGSC0003DMT400018493.v4.03 annot-version=v4.03
Sequence

ATGGCTTTATTTTTAATTCTAACTTCAATAGCCCTAATTTTCGTAGCTCATAAACTCTAC
CACCGTCTCCGATTCAAATTACCACCAGGTCCACGGCCGTTACCGGTGGTCGGAAACCTG
TACGACATAAAACCAGTGAGATTCCGATGCTTCGCCGATTGGGCCCAAACTTACGGCCCA
ATTTTCTCAGTATACTTTGGTTCACAGCTAAACGTTGTGGTAACAACAGCTGAATTAGCT
AAACAAGTATTGAAAGAAAATGATCAGAATTTAGCAGATCGATTTAGAACTAGACCTGCT
AATAATTTGAGTAGAAATGGGATGGATTTGATTTGGGCAGATTATGGGCCTCATTATGTG
AAAGTAAGAAAGCTTTGTAATCTTGAACTTTTTACTCCAAAAAGACTTGAATCTCTTAGA
CCTATCAGAGAAGAAGAAGTTACTGCCATGGTGGAAAATATTTTCAATGACTCTACTAAG
CCTGATAATACTGGTAAAAGCCTGTTGATGAGAGAGTACTTAGGATCAGTAGCATTCAAC
AACATTACAAGGCTAACTTTTGGTAAAAGATTCATGAATGCAGCAGGTGAGATTGATGAA
CAAGGCCAAGAATTTAAGGGCATTGTATCTAATGGCATCAAAATCGGTGGAAAACTTCCC
TTGGCAGAGTATGTTCCATGGCTCCGTTGGTTTTTCTCAATGGAAAACGAGGCACTCGTC
AAACACTCTGAACGTAGAGATCGGTTAACAAGAATTATCATGGACGAACACACTTTGGCT
CGCAAACAAACTGGTGATACTAAGCAGCATTTCGTTGATGCCTTGCTTACTCTTCAGAAG
CAGTATGATCTTAGTGATGACACTGTTATCGGCCTCCTCTGGGATATGATTACAGCAGGA
ATGGACACAACAACCATAACCGTAGAATGGGCAATGGCAGAGCTAGTTAGGAACCCAAGG
GTGCAACAAAAGGCTCAAGAAGAGCTTGACAGGGTAATTGGATCGGACCGAATCATGTCA
GAAACTGATTTCTCTGGACTTCCTTACCTTCAATGTGTAGCCAAAGAGGCTCTAAGGTTG
CACCCACCAACTCCCCTAATGCTTCCACATAAGGCCAGTGCCAGTGTCAAAATCGGCGGT
TATGACATTCCTAAGGGAGCCATTGTGCACGTGAATGTTTGGGCTGTGGCTCGTGATCCA
GCAGTGTGGAAGGACCCATTGGAGTTCAGACCAGAACGCTTCCTTGAGGAAGACGTTGAC
ATGAAGGGACACGACTATCGGCTACTACCATTTGGTGCAGGAAGGCGTGTTTGCCCTGGT
GCACAACTTGCTATCAACTTGGTCACTTCTATGTTGGGTCATTTGTTGCATCATTTTACA
TGGTCTCCGCCCCCGGGTGTTAGCCCGGAGGATATCGACTTGACGGAGAACCCCGGAACA
GTTACTTACATGAAAAATCCAATACAAGCTATTCCTACTCCAAGATTGCCTGCACACTTG
TATAAACGTGTGCCAATGGATATGTAA