Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018457
CDS Infomation

pacid=37453807 polypeptide=PGSC0003DMP400012700 locus=PGSC0003DMG400007160 ID=PGSC0003DMT400018457.v4.03 annot-version=v4.03
Sequence

ATGGAATTCTCCGAAGAATCAATCGATCGGACTTTGGTGTTCAAAGGTAAGCGCAGTAAG
CGTCCACGGCAGTTCATGGCGGTGGCGATGATTGCTTCCACGTCATCAACCGCTGCCGCC
GACTGCGGCGCTGGTGGTGGTGGAAGTGGTGGTGATGGAGGTGAGGATGTTTATAATTAC
TCTTCATCGATGCAGTATTCATCATCAACAACTTCAACTACTCAAATATCGACGACGAGC
AGTACAGAGGAAGATGAGGATATGGCAAATTGCTTAATTCTACTAGCACAAAGTGGCCGA
TGCCAGAAATTACAAGTGGAAAGTAGTGAACGTAAGATGGTGAAAATCAGTAGCCGGAAA
TTTACAGAAATGGCTACAACAACCACCGGAAAAGCAGGGTTCTATGTCTACGAGTGTAAA
ACTTGTAACAGAACGTTTCCATCTTTTCAAGCACTTGGTGGGCATAGAACAAGTCACAAA
AAAATCAAAACCGTAGCCGAAGAGAAAAAATCTACTGCTGATTCTGTTTCACCTTCAATC
GATCATCAACAACAACAAGAGGAGAAATTCAATCGGATCACGGCTTCAGTCACTTCAACC
CAAACAGTCAACAAAGGTAATTCGAATTCACATAGCAATTTGATCATCAATAGCAAGCCA
AAAATTCACGAGTGTTCAATTTGTGGGGCGGAATTCTCATCGGGTCAAGCTTTGGGTGGT
CACATGAGAAGACATAGACCACCAACAATTACAGCAACAAACACTAAAATTACTGTTGAT
GAAACAAGCAACAACAACACTTCAGATAATTCATCACACGATGATGATCAGAATTCGAAA
AAGCCAAAAATCTTTTTATCGCTTGATCTGAACCTGCCGGCGTCACCGGAAGATGATCAT
CACCGAGATAATAATAATAATTTTGAATTTTCAGCTAACCAGCAAAGTCTCGTCTTCTCC
GCTGCAGCTTTAGTGGATTGCCATTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012700
PEP Infomation

pacid=37453807 transcript=PGSC0003DMT400018457 locus=PGSC0003DMG400007160 ID=PGSC0003DMT400018457.v4.03 annot-version=v4.03
Sequence

MEFSEESIDRTLVFKGKRSKRPRQFMAVAMIASTSSTAAADCGAGGGGSGGDGGEDVYNY
SSSMQYSSSTTSTTQISTTSSTEEDEDMANCLILLAQSGRCQKLQVESSERKMVKISSRK
FTEMATTTTGKAGFYVYECKTCNRTFPSFQALGGHRTSHKKIKTVAEEKKSTADSVSPSI
DHQQQQEEKFNRITASVTSTQTVNKGNSNSHSNLIINSKPKIHECSICGAEFSSGQALGG
HMRRHRPPTITATNTKITVDETSNNNTSDNSSHDDDQNSKKPKIFLSLDLNLPASPEDDH
HRDNNNNFEFSANQQSLVFSAAALVDCHY*

Transcript Sequence

Transcript ID

PGSC0003DMT400018457
Transcript Infomation

pacid=37453807 locus=PGSC0003DMG400007160 ID=PGSC0003DMT400018457.v4.03 annot-version=v4.03
Sequence

ATGGAATTCTCCGAAGAATCAATCGATCGGACTTTGGTGTTCAAAGGTAAGCGCAGTAAG
CGTCCACGGCAGTTCATGGCGGTGGCGATGATTGCTTCCACGTCATCAACCGCTGCCGCC
GACTGCGGCGCTGGTGGTGGTGGAAGTGGTGGTGATGGAGGTGAGGATGTTTATAATTAC
TCTTCATCGATGCAGTATTCATCATCAACAACTTCAACTACTCAAATATCGACGACGAGC
AGTACAGAGGAAGATGAGGATATGGCAAATTGCTTAATTCTACTAGCACAAAGTGGCCGA
TGCCAGAAATTACAAGTGGAAAGTAGTGAACGTAAGATGGTGAAAATCAGTAGCCGGAAA
TTTACAGAAATGGCTACAACAACCACCGGAAAAGCAGGGTTCTATGTCTACGAGTGTAAA
ACTTGTAACAGAACGTTTCCATCTTTTCAAGCACTTGGTGGGCATAGAACAAGTCACAAA
AAAATCAAAACCGTAGCCGAAGAGAAAAAATCTACTGCTGATTCTGTTTCACCTTCAATC
GATCATCAACAACAACAAGAGGAGAAATTCAATCGGATCACGGCTTCAGTCACTTCAACC
CAAACAGTCAACAAAGGTAATTCGAATTCACATAGCAATTTGATCATCAATAGCAAGCCA
AAAATTCACGAGTGTTCAATTTGTGGGGCGGAATTCTCATCGGGTCAAGCTTTGGGTGGT
CACATGAGAAGACATAGACCACCAACAATTACAGCAACAAACACTAAAATTACTGTTGAT
GAAACAAGCAACAACAACACTTCAGATAATTCATCACACGATGATGATCAGAATTCGAAA
AAGCCAAAAATCTTTTTATCGCTTGATCTGAACCTGCCGGCGTCACCGGAAGATGATCAT
CACCGAGATAATAATAATAATTTTGAATTTTCAGCTAACCAGCAAAGTCTCGTCTTCTCC
GCTGCAGCTTTAGTGGATTGCCATTACTAA