Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018431
CDS Infomation

pacid=37452688 polypeptide=PGSC0003DMP400012683 locus=PGSC0003DMG400007152 ID=PGSC0003DMT400018431.v4.03 annot-version=v4.03
Sequence

ATGGCAGGAAGGGTAGATCTGGACGGAAATCCGATTAAGCCGATTACAATATGTATGATT
GGTGCCGGAGGATTTATTGGCTCGCATTTATGTGAGAAATTGATGTCGGAGACGCCGCAC
AAGGTGCTTGCCGTCGATGTTAGCAATGACAAGATCAAGCATCTCCTCGAACCGGCTACT
CTCGCCTGGGCTGATCGTATTGAGTTCCACCGTATCAACATTAAGAACGATTCTCGTCTT
GAAGGCCTTATCAAGATGGCAGATCTGACCATCAATCTTGCTGCGATCTGCACTCCAGCT
GATTACAACACTCGTCCACTTGATACTATTTACAGCAACTTCATTGATGCTCTTCCAGTG
GTGAAGTACTGCTCAGAAAATGGAAAGCGTCTTATTCACTTTTCCACCTGTGAAATTTAT
GGGAAAACAATAGGAGCCTTTTTACCCAAAGACAGCCCACTGCGGCAGGATCCTGCATAC
TATGTGCTTAAGGAAGACACCTCCCCTTGCATTTTTGGACCTATTGAGAAGCAGAGGTGG
TCATATGCCTGTGCAAAGCAATTGATTGAGAGGTTGATATATGCTGAGGGTGCTGAGAAT
GGTTTAGAATTCACAATTGTAAGGCCGTTCAATTGGATTGGTCCCAGGATGGATTTCATT
CCGGGCATTGATGGTCCTAGTGAAGGTGTTCCAAGAGTGTTAGCTTGCTTTAGTAATAAC
CTCTTAAGACGTGAACCACTGAAATTAGTTGATGGTGGGGAATCACAGAGAACTTTTATA
TATATCAAGGATGCTATTGAAGCTGTTCTCTTGATGATTGAAAATCCTGCGAGGGCCAAT
GGTCATAATTTTAATGTGGGCAATCCTAACAATGAAGTTACTGTGCGACAGCTAGCTGAA
ATGATGACTAAGGTCTATTCGAAGGTGAGTGGAGAATCTTCTCTTGAAACGCCTACCATT
GATGTAAGTTCCAAAGAATTTTATGGAGAAGGGTATGATGACAGTGACAAGAGAATTCCG
GATATGACTATAATCAACAAACAGCTTGCTTGGAACCCGAAAACATCCCTATGGGACTTG
CTTGAATCAACACTCACCTACCAACACAGGACATATGCTGAGGCTATCAAGCAGGCCATG
TCAAAGTCAACTGCAAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012683
PEP Infomation

pacid=37452688 transcript=PGSC0003DMT400018431 locus=PGSC0003DMG400007152 ID=PGSC0003DMT400018431.v4.03 annot-version=v4.03
Sequence

MAGRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMSETPHKVLAVDVSNDKIKHLLEPAT
LAWADRIEFHRINIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV
VKYCSENGKRLIHFSTCEIYGKTIGAFLPKDSPLRQDPAYYVLKEDTSPCIFGPIEKQRW
SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN
LLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPARANGHNFNVGNPNNEVTVRQLAE
MMTKVYSKVSGESSLETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLAWNPKTSLWDL
LESTLTYQHRTYAEAIKQAMSKSTAN*

Transcript Sequence

Transcript ID

PGSC0003DMT400018431
Transcript Infomation

pacid=37452688 locus=PGSC0003DMG400007152 ID=PGSC0003DMT400018431.v4.03 annot-version=v4.03
Sequence

ATGGCAGGAAGGGTAGATCTGGACGGAAATCCGATTAAGCCGATTACAATATGTATGATT
GGTGCCGGAGGATTTATTGGCTCGCATTTATGTGAGAAATTGATGTCGGAGACGCCGCAC
AAGGTGCTTGCCGTCGATGTTAGCAATGACAAGATCAAGCATCTCCTCGAACCGGCTACT
CTCGCCTGGGCTGATCGTATTGAGTTCCACCGTATCAACATTAAGAACGATTCTCGTCTT
GAAGGCCTTATCAAGATGGCAGATCTGACCATCAATCTTGCTGCGATCTGCACTCCAGCT
GATTACAACACTCGTCCACTTGATACTATTTACAGCAACTTCATTGATGCTCTTCCAGTG
GTGAAGTACTGCTCAGAAAATGGAAAGCGTCTTATTCACTTTTCCACCTGTGAAATTTAT
GGGAAAACAATAGGAGCCTTTTTACCCAAAGACAGCCCACTGCGGCAGGATCCTGCATAC
TATGTGCTTAAGGAAGACACCTCCCCTTGCATTTTTGGACCTATTGAGAAGCAGAGGTGG
TCATATGCCTGTGCAAAGCAATTGATTGAGAGGTTGATATATGCTGAGGGTGCTGAGAAT
GGTTTAGAATTCACAATTGTAAGGCCGTTCAATTGGATTGGTCCCAGGATGGATTTCATT
CCGGGCATTGATGGTCCTAGTGAAGGTGTTCCAAGAGTGTTAGCTTGCTTTAGTAATAAC
CTCTTAAGACGTGAACCACTGAAATTAGTTGATGGTGGGGAATCACAGAGAACTTTTATA
TATATCAAGGATGCTATTGAAGCTGTTCTCTTGATGATTGAAAATCCTGCGAGGGCCAAT
GGTCATAATTTTAATGTGGGCAATCCTAACAATGAAGTTACTGTGCGACAGCTAGCTGAA
ATGATGACTAAGGTCTATTCGAAGGTGAGTGGAGAATCTTCTCTTGAAACGCCTACCATT
GATGTAAGTTCCAAAGAATTTTATGGAGAAGGGTATGATGACAGTGACAAGAGAATTCCG
GATATGACTATAATCAACAAACAGCTTGCTTGGAACCCGAAAACATCCCTATGGGACTTG
CTTGAATCAACACTCACCTACCAACACAGGACATATGCTGAGGCTATCAAGCAGGCCATG
TCAAAGTCAACTGCAAATTGA