Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018405
CDS Infomation

pacid=37452506 polypeptide=PGSC0003DMP400012664 locus=PGSC0003DMG400007145 ID=PGSC0003DMT400018405.v4.03 annot-version=v4.03
Sequence

ATGGACAAAGCCAAAAACAAGAAGAAAAACCTAACTCCAGAAGGTCAATTCCGGTTAAGC
CTAGACAATTGCTCGAAAACGAAAGATCTTTCTACAGCCATCTCCTTATACGAATCCGCT
ATTTCAGAACCCTCAACAATCCGCCTTTCCAATAACCATTTCAATTCTTTTCTTTACATC
TGCTCCAACTCCTTTTCAGACCCATCAACGAAAAATGACGCTATTCAATTTGGGTTTCGA
GTTTTTGAACATATGGGTTCGTGTAATATAACCCCTAATGAGGCAACTGTCACGGCTGTT
GCTCGGCTGGCGGCAGCAACTGATGACGGTGATAGAGCATTTGAGTTGGCTAAAGGGGTG
GGGAGTTGTGGGAAGTTAAGGACTTATGGACCGGCTTTGTTTTGTTTTTGTAAGATGGGT
GAGGCTGATAAGACCTATCAAGTGGAAGAACACATGCGGTCTCTTGGCTTGCAACTTGAG
GAAGCTGAGCTTGCTGGGTTGTTAAAGGTGAGTGTGGAGAAAGAAAGGGAAGAGAAGGTC
TATCAGTATTTACATAAACTGAGAATGTCAATCAGGAGCGTAAGTGACTCGACAGCAGAA
ATCATACAAAGTTGGTTTGGAGGGGAAATGGCATCTAAGGTGGGGTTATCCAACTGGGAT
ATGGATCAGGTGAAACAAGCAATTCTACAAAATGGTGGAGGGTGGCATGGTCTTGGATGG
CTTGGAAAGGGTAAATGGCTTGCACAGAGGTCCCAAATAGCTCCAGATGGGAGGTGTCTA
ACTTGTGGGGAACAGTTGGTTTGTGTTGATATTGACAGAGCAGAGACAGAAAGATTTGCA
GAGTCGGTTGCTTCTTTGGCAATGGAAAGGGAAGTCCATTCCAATTTTAAGGAATTTCAG
GACTGGCTGGAAAATTCAGATTATGATGCTGTTGTGGATGCAGCAAATGTTGGGCTATTT
CAGCAGAATTTTGCCGAGGGAGGCTTTAGTATTGCACAGCTTGTTGCTGTTGTGAAGGAA
TTGCATAGCAGGAGCAACAAGTGGCCACTGGTTATATTACACAAAAAGCGTGTTCGTACA
CTTCTTGAGAATGCTGGCTATAGAGAGTTGCTTGAAGAGTGGATAAATGAAAAGATACTT
TACGGAACACCCTTTGGATCCAATGATGACTGGTACTGGCTTTATGCAGCAGTGAAACGT
AAGTGTTTGCTCGTGACAAATGATGAAATGAGAGATCACATCTTTGAACTCCTGGGTAGT
AGCTTTTTTGCCCGATGGAAAGAAAGACATCAGGTCAAGTACACTTTTGTTAAAGGGGAG
ATTAAGCTTCTGATGCCACCCACATATTCTGTTGTCATTCAGGAATCCAAGATTGGGTCA
TGGCATGTGCCTCTGGCAGGTGAGGTGGTTGAGGAGTCTTCAAGGACTTGGCTCTGCATC
ACCAGACAAGCTTCATGTGAATCTGACAATAAGCAACATGCAAGCGTAGTTGAAGCTTCT
CAAGTTAGTGAACTTAATCAAATTGCAGCCTCTTGCCATTCAGGTAGTTTTACAAGTCAG
AATGGCGGCAGCTTAAATAAATGTTCTGGTTTGGCTGGTAAGAGGAAAGAGAGGTCCCCT
TCTCCAACTCCATCTCACTCCAGTCTACAATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012664
PEP Infomation

pacid=37452506 transcript=PGSC0003DMT400018405 locus=PGSC0003DMG400007145 ID=PGSC0003DMT400018405.v4.03 annot-version=v4.03
Sequence

MDKAKNKKKNLTPEGQFRLSLDNCSKTKDLSTAISLYESAISEPSTIRLSNNHFNSFLYI
CSNSFSDPSTKNDAIQFGFRVFEHMGSCNITPNEATVTAVARLAAATDDGDRAFELAKGV
GSCGKLRTYGPALFCFCKMGEADKTYQVEEHMRSLGLQLEEAELAGLLKVSVEKEREEKV
YQYLHKLRMSIRSVSDSTAEIIQSWFGGEMASKVGLSNWDMDQVKQAILQNGGGWHGLGW
LGKGKWLAQRSQIAPDGRCLTCGEQLVCVDIDRAETERFAESVASLAMEREVHSNFKEFQ
DWLENSDYDAVVDAANVGLFQQNFAEGGFSIAQLVAVVKELHSRSNKWPLVILHKKRVRT
LLENAGYRELLEEWINEKILYGTPFGSNDDWYWLYAAVKRKCLLVTNDEMRDHIFELLGS
SFFARWKERHQVKYTFVKGEIKLLMPPTYSVVIQESKIGSWHVPLAGEVVEESSRTWLCI
TRQASCESDNKQHASVVEASQVSELNQIAASCHSGSFTSQNGGSLNKCSGLAGKRKERSP
SPTPSHSSLQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400018405
Transcript Infomation

pacid=37452506 locus=PGSC0003DMG400007145 ID=PGSC0003DMT400018405.v4.03 annot-version=v4.03
Sequence

ATGGACAAAGCCAAAAACAAGAAGAAAAACCTAACTCCAGAAGGTCAATTCCGGTTAAGC
CTAGACAATTGCTCGAAAACGAAAGATCTTTCTACAGCCATCTCCTTATACGAATCCGCT
ATTTCAGAACCCTCAACAATCCGCCTTTCCAATAACCATTTCAATTCTTTTCTTTACATC
TGCTCCAACTCCTTTTCAGACCCATCAACGAAAAATGACGCTATTCAATTTGGGTTTCGA
GTTTTTGAACATATGGGTTCGTGTAATATAACCCCTAATGAGGCAACTGTCACGGCTGTT
GCTCGGCTGGCGGCAGCAACTGATGACGGTGATAGAGCATTTGAGTTGGCTAAAGGGGTG
GGGAGTTGTGGGAAGTTAAGGACTTATGGACCGGCTTTGTTTTGTTTTTGTAAGATGGGT
GAGGCTGATAAGACCTATCAAGTGGAAGAACACATGCGGTCTCTTGGCTTGCAACTTGAG
GAAGCTGAGCTTGCTGGGTTGTTAAAGGTGAGTGTGGAGAAAGAAAGGGAAGAGAAGGTC
TATCAGTATTTACATAAACTGAGAATGTCAATCAGGAGCGTAAGTGACTCGACAGCAGAA
ATCATACAAAGTTGGTTTGGAGGGGAAATGGCATCTAAGGTGGGGTTATCCAACTGGGAT
ATGGATCAGGTGAAACAAGCAATTCTACAAAATGGTGGAGGGTGGCATGGTCTTGGATGG
CTTGGAAAGGGTAAATGGCTTGCACAGAGGTCCCAAATAGCTCCAGATGGGAGGTGTCTA
ACTTGTGGGGAACAGTTGGTTTGTGTTGATATTGACAGAGCAGAGACAGAAAGATTTGCA
GAGTCGGTTGCTTCTTTGGCAATGGAAAGGGAAGTCCATTCCAATTTTAAGGAATTTCAG
GACTGGCTGGAAAATTCAGATTATGATGCTGTTGTGGATGCAGCAAATGTTGGGCTATTT
CAGCAGAATTTTGCCGAGGGAGGCTTTAGTATTGCACAGCTTGTTGCTGTTGTGAAGGAA
TTGCATAGCAGGAGCAACAAGTGGCCACTGGTTATATTACACAAAAAGCGTGTTCGTACA
CTTCTTGAGAATGCTGGCTATAGAGAGTTGCTTGAAGAGTGGATAAATGAAAAGATACTT
TACGGAACACCCTTTGGATCCAATGATGACTGGTACTGGCTTTATGCAGCAGTGAAACGT
AAGTGTTTGCTCGTGACAAATGATGAAATGAGAGATCACATCTTTGAACTCCTGGGTAGT
AGCTTTTTTGCCCGATGGAAAGAAAGACATCAGGTCAAGTACACTTTTGTTAAAGGGGAG
ATTAAGCTTCTGATGCCACCCACATATTCTGTTGTCATTCAGGAATCCAAGATTGGGTCA
TGGCATGTGCCTCTGGCAGGTGAGGTGGTTGAGGAGTCTTCAAGGACTTGGCTCTGCATC
ACCAGACAAGCTTCATGTGAATCTGACAATAAGCAACATGCAAGCGTAGTTGAAGCTTCT
CAAGTTAGTGAACTTAATCAAATTGCAGCCTCTTGCCATTCAGGTAGTTTTACAAGTCAG
AATGGCGGCAGCTTAAATAAATGTTCTGGTTTGGCTGGTAAGAGGAAAGAGAGGTCCCCT
TCTCCAACTCCATCTCACTCCAGTCTACAATCTTGA