Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018331
CDS Infomation

pacid=37451908 polypeptide=PGSC0003DMP400012613 locus=PGSC0003DMG400007118 ID=PGSC0003DMT400018331.v4.03 annot-version=v4.03
Sequence

ATGGCTACTATTCTTTTTTTCTTGATTTTGGCTATATCTATACTTGTGTTATCAATTCTC
TTTTTTCTTTCTAGACTTAAACCTTATTGTGAGTGTGAGATTTGCAAAGGCTATTTGAAC
TCTACATGGTCTTTAGAGTTCAAAAATCTTTGTGATTGGTATTCTTATCTACTAAAAAAG
TCACCAAGTGGTACAATTCATGTACACGTTCTTGGAAATGTCATTACAGCAAATCCAAAC
AACGTGGAATATATGCTCAAAACAAATTTCGATAATTTCCCTAAAGGGAAACAATTTTCT
ACGATCCTCGGCGATTTATTAGGCCGAGGAATTTTCGCCGTAGACGGCGAAATGTGGAAG
TTTCAACGGAAGATGGCAAGTTTAGAACTCGGAAGCGTATCGATACGTTCGTACGCTTTC
GATATCGTCAGTGACGAAATTAGAAACCGGTTGATTCCGCTTTTGAAAAGTAACATCCAC
ACCGTTTTGGACTTACAAGATGTTTTACGACGTTTTTCTTTTGATAGTATTTGTAAATTT
TCTTTTGGTATGGATCCTGGTTGTTTAAAATTATCATTACCAGATTCAAATCTTCAAGAG
TCATTTGATTTAGCTTCGAAATTGTCAGCTGAAAGAGCTATGACAGTTTCACCTTTAGTT
TGGAAAATTAAAAGAGGTTTGAATATTGGATCAGAAAAGAAGCTAAAAGAAGCAATTAAA
AAAGTTGATATTCTTGCTGAAGAGGTAATAATTCAGAAAAGAAAAAACGATTTTTCTTCC
CAAAATGACCTTTTGGCTAGGTTCATGAGGAATATGAATGATGATAAACTCCTTAGGGAC
ATTATCGTCAGTTTTCTTTTAGCAGGAAGAGACACTGTTGCTTCCGGACTGACTACTTTT
TTTTGGCTACTAGCACAACATCCACGTGTCATTGATGAAATTCGAGCTGAGTCGAGTCGA
GTCATGGTAAGAAGAGAAAAAGAAACTCTAGCTAGTTTTGAAGAAATTCGCGAAATGCAT
TATTTGACTGCGGCAATACATGAGAGTATTAGGCTATTTCCACCGGTTCAATTTGATTCG
AAGTTTTGTCAAGAAGACGATACTCTCCCTGATGGTACGTTTGTGGCTAAAGGGACAAGG
GTGACATATCATCCATATGCAATGGGGAGGATGGAGGGTATTTGGGGTAAAGATTGTCTC
GAATTTAAGCCAGAAAGATGGTTGGAAGAGGGACTTTTTAAGGCACAATGTCCTTTTAAA
TACCCGGTTTTTCAAGGAGGGGTTAGAGTTTGTTTGGGTAAAGATTTATCTATTGTGGAG
ATGAAGAGTGTTGCTTTGGCTTTGATTAGGCAATTTGACTTTCAAGTTCACGTGGCTACT
AAAGAGCAGGCACCAAAGTTCATGCCGGGTTTGACAGCCACCGTGAGAGGCGGACTTCCC
ATCATGGTTCAAGAAAGACGAGAACAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400012613
PEP Infomation

pacid=37451908 transcript=PGSC0003DMT400018331 locus=PGSC0003DMG400007118 ID=PGSC0003DMT400018331.v4.03 annot-version=v4.03
Sequence

MATILFFLILAISILVLSILFFLSRLKPYCECEICKGYLNSTWSLEFKNLCDWYSYLLKK
SPSGTIHVHVLGNVITANPNNVEYMLKTNFDNFPKGKQFSTILGDLLGRGIFAVDGEMWK
FQRKMASLELGSVSIRSYAFDIVSDEIRNRLIPLLKSNIHTVLDLQDVLRRFSFDSICKF
SFGMDPGCLKLSLPDSNLQESFDLASKLSAERAMTVSPLVWKIKRGLNIGSEKKLKEAIK
KVDILAEEVIIQKRKNDFSSQNDLLARFMRNMNDDKLLRDIIVSFLLAGRDTVASGLTTF
FWLLAQHPRVIDEIRAESSRVMVRREKETLASFEEIREMHYLTAAIHESIRLFPPVQFDS
KFCQEDDTLPDGTFVAKGTRVTYHPYAMGRMEGIWGKDCLEFKPERWLEEGLFKAQCPFK
YPVFQGGVRVCLGKDLSIVEMKSVALALIRQFDFQVHVATKEQAPKFMPGLTATVRGGLP
IMVQERREQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400018331
Transcript Infomation

pacid=37451908 locus=PGSC0003DMG400007118 ID=PGSC0003DMT400018331.v4.03 annot-version=v4.03
Sequence

ATGGCTACTATTCTTTTTTTCTTGATTTTGGCTATATCTATACTTGTGTTATCAATTCTC
TTTTTTCTTTCTAGACTTAAACCTTATTGTGAGTGTGAGATTTGCAAAGGCTATTTGAAC
TCTACATGGTCTTTAGAGTTCAAAAATCTTTGTGATTGGTATTCTTATCTACTAAAAAAG
TCACCAAGTGGTACAATTCATGTACACGTTCTTGGAAATGTCATTACAGCAAATCCAAAC
AACGTGGAATATATGCTCAAAACAAATTTCGATAATTTCCCTAAAGGGAAACAATTTTCT
ACGATCCTCGGCGATTTATTAGGCCGAGGAATTTTCGCCGTAGACGGCGAAATGTGGAAG
TTTCAACGGAAGATGGCAAGTTTAGAACTCGGAAGCGTATCGATACGTTCGTACGCTTTC
GATATCGTCAGTGACGAAATTAGAAACCGGTTGATTCCGCTTTTGAAAAGTAACATCCAC
ACCGTTTTGGACTTACAAGATGTTTTACGACGTTTTTCTTTTGATAGTATTTGTAAATTT
TCTTTTGGTATGGATCCTGGTTGTTTAAAATTATCATTACCAGATTCAAATCTTCAAGAG
TCATTTGATTTAGCTTCGAAATTGTCAGCTGAAAGAGCTATGACAGTTTCACCTTTAGTT
TGGAAAATTAAAAGAGGTTTGAATATTGGATCAGAAAAGAAGCTAAAAGAAGCAATTAAA
AAAGTTGATATTCTTGCTGAAGAGGTAATAATTCAGAAAAGAAAAAACGATTTTTCTTCC
CAAAATGACCTTTTGGCTAGGTTCATGAGGAATATGAATGATGATAAACTCCTTAGGGAC
ATTATCGTCAGTTTTCTTTTAGCAGGAAGAGACACTGTTGCTTCCGGACTGACTACTTTT
TTTTGGCTACTAGCACAACATCCACGTGTCATTGATGAAATTCGAGCTGAGTCGAGTCGA
GTCATGGTAAGAAGAGAAAAAGAAACTCTAGCTAGTTTTGAAGAAATTCGCGAAATGCAT
TATTTGACTGCGGCAATACATGAGAGTATTAGGCTATTTCCACCGGTTCAATTTGATTCG
AAGTTTTGTCAAGAAGACGATACTCTCCCTGATGGTACGTTTGTGGCTAAAGGGACAAGG
GTGACATATCATCCATATGCAATGGGGAGGATGGAGGGTATTTGGGGTAAAGATTGTCTC
GAATTTAAGCCAGAAAGATGGTTGGAAGAGGGACTTTTTAAGGCACAATGTCCTTTTAAA
TACCCGGTTTTTCAAGGAGGGGTTAGAGTTTGTTTGGGTAAAGATTTATCTATTGTGGAG
ATGAAGAGTGTTGCTTTGGCTTTGATTAGGCAATTTGACTTTCAAGTTCACGTGGCTACT
AAAGAGCAGGCACCAAAGTTCATGCCGGGTTTGACAGCCACCGTGAGAGGCGGACTTCCC
ATCATGGTTCAAGAAAGACGAGAACAATAG