Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018306
CDS Infomation

pacid=37453219 polypeptide=PGSC0003DMP400012605 locus=PGSC0003DMG400007110 ID=PGSC0003DMT400018306.v4.03 annot-version=v4.03
Sequence

ATGGCGAGTCAAGGAATTGGAGAGACTGGTTTGACAGATTCTGGAACATCACACCACAAT
CACAATATGCCATATGCTGTTTTTAGGGGGCTAAATCCTGCTAGCACAAGCTTCATGTAT
CATTCTACTCCCAATGGTAATCAAGAAGGAGCTGGTTTTGATTTTGGAGAGCTAGAAGAA
GCTTTTGTACTGCAAGGATTTAAGATGAGTAATGATGAAGCTAAAGCATCTTTATATGCA
GCAGCAGCCACAGGGAAGCCTGCTGCAACTTTGGAGATGTTCCCTTCTTGGCCTATGAGA
TACCAACAGACCCCAAGAGAAAACTCAAAATCAAGAGAAGAGAGTACTGATTCAGGTTCA
CTTTCAAGCAGAGCTCAACCCCATTTTGAGCCAGAATCTCCCATCAGTAGAAAAACATCT
TCAGACCATCAACTTCAGATAACACACAAATCTCTAGAACAACAACAGCAACAGCTTCAA
GATATGGCAAGTAATAATAATCCAAGAACAGGAGTTTTACAAACTGAACTATCTTCCAAG
TCCAACAGTGAAAAGACATTGAGACGTTTAGCTCAAAATAGAGAAGCAGCAAAGAAAAGC
AGGATAAGAAAAAAAGCTTATGTACAACAGCTAGAAACAAGTAGGATAAGACTTTCTCAG
CTAGAACAAGAACTTCAAAGGGCTAGCTCTCAGGGGATTTTCTTGGGAGGTGGTACTGCT
GCTGGTTCCAATATCAGCTCTGGTGCTGCAATATTTGATATGGAATATTCAAGATGGTTG
GATGATGATCACAGGCACATAGCCGAGCTTCGAACTGCATTACAAGCACATTTATCAGAT
GGTGATCTTAGATTAATAGTTGATGGATACATTGCTCATTACGACGAAATTTTCAACTTG
AAGGGAGTGGCAGCAAAATCTGATGTATTTCACCTAATCACTGGAATGTGGACAACTCCA
GCTGAACGCTGCTTCCTTTGGATGGGTGGTTTTAGGCCCTCTGAGCTTATCAAGATGTTG
ATAGGACAATTAGACCCTTTAACAGAGCAGCAAGTAGTTGGAATATACAGCCTCCAACAA
TCTTCCCAACAGGCAGAGGAAGCTCTTTCACAGGGACTAGAACAACTACAACAATCTCTA
ATTGATACTGTTGCCACTGCTTCTCTCCATGATGGAATGCATCATATGGCTCTTGCATTG
GGGAAACTCTCCAATCTTGAAGGATTTGTTCGTCAGGCTGATAATTTGAGACAACAAACA
TTGCATCAATTACACAGAATATTAACAGTAAGACAAGCAGCCAGATGTTTCTTGGTGATT
GGAGAATATTATGGTCGACTACGAGCTCTAAGTTCTCTATGGTTATCTCGTCCACGAGAG
ACACTGATCGTGGATGATAATTCTTGTCAAACAATAACGGGATTACAAATGGTACAATCT
TCTCAGAACCACTTCTCAAATTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012605
PEP Infomation

pacid=37453219 transcript=PGSC0003DMT400018306 locus=PGSC0003DMG400007110 ID=PGSC0003DMT400018306.v4.03 annot-version=v4.03
Sequence

MASQGIGETGLTDSGTSHHNHNMPYAVFRGLNPASTSFMYHSTPNGNQEGAGFDFGELEE
AFVLQGFKMSNDEAKASLYAAAATGKPAATLEMFPSWPMRYQQTPRENSKSREESTDSGS
LSSRAQPHFEPESPISRKTSSDHQLQITHKSLEQQQQQLQDMASNNNPRTGVLQTELSSK
SNSEKTLRRLAQNREAAKKSRIRKKAYVQQLETSRIRLSQLEQELQRASSQGIFLGGGTA
AGSNISSGAAIFDMEYSRWLDDDHRHIAELRTALQAHLSDGDLRLIVDGYIAHYDEIFNL
KGVAAKSDVFHLITGMWTTPAERCFLWMGGFRPSELIKMLIGQLDPLTEQQVVGIYSLQQ
SSQQAEEALSQGLEQLQQSLIDTVATASLHDGMHHMALALGKLSNLEGFVRQADNLRQQT
LHQLHRILTVRQAARCFLVIGEYYGRLRALSSLWLSRPRETLIVDDNSCQTITGLQMVQS
SQNHFSNF*

Transcript Sequence

Transcript ID

PGSC0003DMT400018306
Transcript Infomation

pacid=37453219 locus=PGSC0003DMG400007110 ID=PGSC0003DMT400018306.v4.03 annot-version=v4.03
Sequence

ATGGCGAGTCAAGGAATTGGAGAGACTGGTTTGACAGATTCTGGAACATCACACCACAAT
CACAATATGCCATATGCTGTTTTTAGGGGGCTAAATCCTGCTAGCACAAGCTTCATGTAT
CATTCTACTCCCAATGGTAATCAAGAAGGAGCTGGTTTTGATTTTGGAGAGCTAGAAGAA
GCTTTTGTACTGCAAGGATTTAAGATGAGTAATGATGAAGCTAAAGCATCTTTATATGCA
GCAGCAGCCACAGGGAAGCCTGCTGCAACTTTGGAGATGTTCCCTTCTTGGCCTATGAGA
TACCAACAGACCCCAAGAGAAAACTCAAAATCAAGAGAAGAGAGTACTGATTCAGGTTCA
CTTTCAAGCAGAGCTCAACCCCATTTTGAGCCAGAATCTCCCATCAGTAGAAAAACATCT
TCAGACCATCAACTTCAGATAACACACAAATCTCTAGAACAACAACAGCAACAGCTTCAA
GATATGGCAAGTAATAATAATCCAAGAACAGGAGTTTTACAAACTGAACTATCTTCCAAG
TCCAACAGTGAAAAGACATTGAGACGTTTAGCTCAAAATAGAGAAGCAGCAAAGAAAAGC
AGGATAAGAAAAAAAGCTTATGTACAACAGCTAGAAACAAGTAGGATAAGACTTTCTCAG
CTAGAACAAGAACTTCAAAGGGCTAGCTCTCAGGGGATTTTCTTGGGAGGTGGTACTGCT
GCTGGTTCCAATATCAGCTCTGGTGCTGCAATATTTGATATGGAATATTCAAGATGGTTG
GATGATGATCACAGGCACATAGCCGAGCTTCGAACTGCATTACAAGCACATTTATCAGAT
GGTGATCTTAGATTAATAGTTGATGGATACATTGCTCATTACGACGAAATTTTCAACTTG
AAGGGAGTGGCAGCAAAATCTGATGTATTTCACCTAATCACTGGAATGTGGACAACTCCA
GCTGAACGCTGCTTCCTTTGGATGGGTGGTTTTAGGCCCTCTGAGCTTATCAAGATGTTG
ATAGGACAATTAGACCCTTTAACAGAGCAGCAAGTAGTTGGAATATACAGCCTCCAACAA
TCTTCCCAACAGGCAGAGGAAGCTCTTTCACAGGGACTAGAACAACTACAACAATCTCTA
ATTGATACTGTTGCCACTGCTTCTCTCCATGATGGAATGCATCATATGGCTCTTGCATTG
GGGAAACTCTCCAATCTTGAAGGATTTGTTCGTCAGGCTGATAATTTGAGACAACAAACA
TTGCATCAATTACACAGAATATTAACAGTAAGACAAGCAGCCAGATGTTTCTTGGTGATT
GGAGAATATTATGGTCGACTACGAGCTCTAAGTTCTCTATGGTTATCTCGTCCACGAGAG
ACACTGATCGTGGATGATAATTCTTGTCAAACAATAACGGGATTACAAATGGTACAATCT
TCTCAGAACCACTTCTCAAATTTCTGA