Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018194
CDS Infomation

pacid=37432296 polypeptide=PGSC0003DMP400012523 locus=PGSC0003DMG400007060 ID=PGSC0003DMT400018194.v4.03 annot-version=v4.03
Sequence

ATGGCGAGAAGGCGATTGTTGCTGTTATTAAAGCCATTCGATGTGTTACCATCACGCCAA
TTTGATGACAGTTCTCATTTCAGAAACCCTAAGTTATTGCAGGTATTAAAATATTTAGAC
AGTAGATGTCTGGTTCACAAGGAGGCTATAAACTTCTGTCAGAACATTTTGAGGAAAAAG
TTTGTCGATTGGGAAGCTGTTTATCGTTTTAATCTATGTCGGCCGATCCGTGATGTAGAT
TTAGTAGTTACAATAGGGGGAGATGGTACATTACTGCAGGCAAGCCATTTTATGGATGAT
TCCATTCCTGTTCTAGGAGTAAATTCTGACCCAACTCAAGCAGAAGAGGTTGAAGATTAC
AATGAAGAATTTGACGCTACAAGGAGTACAGGATATCTTTGTGCGGCAACTGTCAAGAAC
TTTGAACAAATTATAGATGATATCCTTGAAAATCATGCTAGACCTTCTGAAGTCTCAAGG
ATGTCAGTCACTCTCAACTCAAAGCAACTTCCGACTTATGCATTAAATGATATTTTAATT
TGCCATCCTTGCCCTGCTACAGTGTCTCGATTCTCATTCAGTAAAAAGAAAGAGGACCAG
TCTTCTTCTTCTATGGTGCATTGCAGATCAAGTGGACTTAGAGTGTCAACAGCTGCTGGG
TCAACAGCTGCAATGCTTTCAACTGGTGGATTTGCAATGCCAATTTTGTCCCAAGATCTC
CAGTATATAGTGAGAGAACCCATTTCTCCTGGAGCTTATAATAGCCTGATGAACGGTACT
GTGAAGCCTGAGGAGTTGATGGAGATTGCATGGTATTGCAAAGAAGGGCTGATTTATATC
GATGGCTCTCATCTTATTCACTCTGTTCAACATGGGGATATCATTGAACTCTCTTCCAAA
GCTCCAAAATTGAAAGTTTTCTTGCCATCTCACTTGATATCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400012523
PEP Infomation

pacid=37432296 transcript=PGSC0003DMT400018194 locus=PGSC0003DMG400007060 ID=PGSC0003DMT400018194.v4.03 annot-version=v4.03
Sequence

MARRRLLLLLKPFDVLPSRQFDDSSHFRNPKLLQVLKYLDSRCLVHKEAINFCQNILRKK
FVDWEAVYRFNLCRPIRDVDLVVTIGGDGTLLQASHFMDDSIPVLGVNSDPTQAEEVEDY
NEEFDATRSTGYLCAATVKNFEQIIDDILENHARPSEVSRMSVTLNSKQLPTYALNDILI
CHPCPATVSRFSFSKKKEDQSSSSMVHCRSSGLRVSTAAGSTAAMLSTGGFAMPILSQDL
QYIVREPISPGAYNSLMNGTVKPEELMEIAWYCKEGLIYIDGSHLIHSVQHGDIIELSSK
APKLKVFLPSHLIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400018194
Transcript Infomation

pacid=37432296 locus=PGSC0003DMG400007060 ID=PGSC0003DMT400018194.v4.03 annot-version=v4.03
Sequence

ATGGCGAGAAGGCGATTGTTGCTGTTATTAAAGCCATTCGATGTGTTACCATCACGCCAA
TTTGATGACAGTTCTCATTTCAGAAACCCTAAGTTATTGCAGGTATTAAAATATTTAGAC
AGTAGATGTCTGGTTCACAAGGAGGCTATAAACTTCTGTCAGAACATTTTGAGGAAAAAG
TTTGTCGATTGGGAAGCTGTTTATCGTTTTAATCTATGTCGGCCGATCCGTGATGTAGAT
TTAGTAGTTACAATAGGGGGAGATGGTACATTACTGCAGGCAAGCCATTTTATGGATGAT
TCCATTCCTGTTCTAGGAGTAAATTCTGACCCAACTCAAGCAGAAGAGGTTGAAGATTAC
AATGAAGAATTTGACGCTACAAGGAGTACAGGATATCTTTGTGCGGCAACTGTCAAGAAC
TTTGAACAAATTATAGATGATATCCTTGAAAATCATGCTAGACCTTCTGAAGTCTCAAGG
ATGTCAGTCACTCTCAACTCAAAGCAACTTCCGACTTATGCATTAAATGATATTTTAATT
TGCCATCCTTGCCCTGCTACAGTGTCTCGATTCTCATTCAGTAAAAAGAAAGAGGACCAG
TCTTCTTCTTCTATGGTGCATTGCAGATCAAGTGGACTTAGAGTGTCAACAGCTGCTGGG
TCAACAGCTGCAATGCTTTCAACTGGTGGATTTGCAATGCCAATTTTGTCCCAAGATCTC
CAGTATATAGTGAGAGAACCCATTTCTCCTGGAGCTTATAATAGCCTGATGAACGGTACT
GTGAAGCCTGAGGAGTTGATGGAGATTGCATGGTATTGCAAAGAAGGGCTGATTTATATC
GATGGCTCTCATCTTATTCACTCTGTTCAACATGGGGATATCATTGAACTCTCTTCCAAA
GCTCCAAAATTGAAAGTTTTCTTGCCATCTCACTTGATATCATGA