Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018193
CDS Infomation

pacid=37434574 polypeptide=PGSC0003DMP400012522 locus=PGSC0003DMG400007059 ID=PGSC0003DMT400018193.v4.03 annot-version=v4.03
Sequence

ATGTCTAACTATACTCCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCT
CATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGAGTACAATATTGTGGTCCTTGACAAG
CTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTCAAG
TTTGTTAAGGGAGACATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATGACCGAGAAC
ATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGC
TTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTT
TCTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATGAGGTTTACGGAGAAACTGAT
GAAGATGCTGTTGTAGGAAACCATGAAGCCTCGCAACTTCTTCCCACAAACCCATATTCA
GCCACGAAAGCTGGGGCTGAAATGCTTGTTATGGCATATGGAAGATCATATGGATTGCCT
ATTATCACCACTAGAGGGAACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATC
CCAAAGTTCATACTTTTATCTTTGCAAGGGAAGCCTCTTCCTATTCAAGGAGATGGTTCA
AATGTTAGAAGTTATCTCTATTGTGAGGATGTTGCTGAGGCTTTCGAAGTTGTTCTTCAC
CGAGGTGATGTTGGTCATGTTTATAACATTGGGACTAAGAAAGAGAGGCGAGTGATTGAT
GTTGCCAAAGATATATCCAATCTTTTTAACAGGGATCCAGACGCAAGCATTCAGTTTGTG
GAGAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTG
GGTTGGTCCCAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACGATGGATTGGTATGTC
AATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCACTGCTTCCCCATCCTAGAATGCCG
ATGATGCCTGGTGGGGTAGAGAGAAATTGGTATGGAGCTGAAAAAGATGATTCTGGATCA
TCTGAGGTCTCAGGAAACGCCAACCATACCAGAATGGTAGTTCCAGCTTCCAAGATCAGC
AACTCCCCTAGTAAATCACCTTATAAGTTTTTGATATATGGTAGGACTGGGTGGATTGGT
GGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGC
CTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTC
AACGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAA
ACAATCCGTACGAATGTTGCTGGAACTCTAAACTTGGCAGATGTTTGTAAGGAGAATGGT
TTACTAATGATGAATTTTGCAACCGGTTGCATATTCGAATACAATGCTGCACACCCAGAA
GGTTCTGGCATTGGATTCAAAGAAGAAGACTCACCCAATTTCACCGGTTCTTTCTATTCA
AAGACCAAGGCCATGGTAGGTACCCCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012522
PEP Infomation

pacid=37434574 transcript=PGSC0003DMT400018193 locus=PGSC0003DMG400007059 ID=PGSC0003DMT400018193.v4.03 annot-version=v4.03
Sequence

MSNYTPKNILITGAAGFIASHVANRLVRSYPEYNIVVLDKLDYCSNLKNLSPSRSSPNFK
FVKGDIGSADLVNYLLMTENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
SGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
IITTRGNNVYGPNQFPEKLIPKFILLSLQGKPLPIQGDGSNVRSYLYCEDVAEAFEVVLH
RGDVGHVYNIGTKKERRVIDVAKDISNLFNRDPDASIQFVENRPFNDQRYFLDDQKLKNL
GWSQKTTWEEGLKKTMDWYVNNPDWWGDVSGALLPHPRMPMMPGGVERNWYGAEKDDSGS
SEVSGNANHTRMVVPASKISNSPSKSPYKFLIYGRTGWIGGLLSKLCEKQGIPYEYGKGR
LEDRSQLLSDIHAVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLNLADVCKENG
LLMMNFATGCIFEYNAAHPEGSGIGFKEEDSPNFTGSFYSKTKAMVGTP*

Transcript Sequence

Transcript ID

PGSC0003DMT400018193
Transcript Infomation

pacid=37434574 locus=PGSC0003DMG400007059 ID=PGSC0003DMT400018193.v4.03 annot-version=v4.03
Sequence

ATGTCTAACTATACTCCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCT
CATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGAGTACAATATTGTGGTCCTTGACAAG
CTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTCAAG
TTTGTTAAGGGAGACATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATGACCGAGAAC
ATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGC
TTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTT
TCTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATGAGGTTTACGGAGAAACTGAT
GAAGATGCTGTTGTAGGAAACCATGAAGCCTCGCAACTTCTTCCCACAAACCCATATTCA
GCCACGAAAGCTGGGGCTGAAATGCTTGTTATGGCATATGGAAGATCATATGGATTGCCT
ATTATCACCACTAGAGGGAACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATC
CCAAAGTTCATACTTTTATCTTTGCAAGGGAAGCCTCTTCCTATTCAAGGAGATGGTTCA
AATGTTAGAAGTTATCTCTATTGTGAGGATGTTGCTGAGGCTTTCGAAGTTGTTCTTCAC
CGAGGTGATGTTGGTCATGTTTATAACATTGGGACTAAGAAAGAGAGGCGAGTGATTGAT
GTTGCCAAAGATATATCCAATCTTTTTAACAGGGATCCAGACGCAAGCATTCAGTTTGTG
GAGAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTG
GGTTGGTCCCAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACGATGGATTGGTATGTC
AATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCACTGCTTCCCCATCCTAGAATGCCG
ATGATGCCTGGTGGGGTAGAGAGAAATTGGTATGGAGCTGAAAAAGATGATTCTGGATCA
TCTGAGGTCTCAGGAAACGCCAACCATACCAGAATGGTAGTTCCAGCTTCCAAGATCAGC
AACTCCCCTAGTAAATCACCTTATAAGTTTTTGATATATGGTAGGACTGGGTGGATTGGT
GGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGC
CTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTC
AACGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAA
ACAATCCGTACGAATGTTGCTGGAACTCTAAACTTGGCAGATGTTTGTAAGGAGAATGGT
TTACTAATGATGAATTTTGCAACCGGTTGCATATTCGAATACAATGCTGCACACCCAGAA
GGTTCTGGCATTGGATTCAAAGAAGAAGACTCACCCAATTTCACCGGTTCTTTCTATTCA
AAGACCAAGGCCATGGTAGGTACCCCTTAA