Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400018046
CDS Infomation

pacid=37443243 polypeptide=PGSC0003DMP400012418 locus=PGSC0003DMG400007010 ID=PGSC0003DMT400018046.v4.03 annot-version=v4.03
Sequence

ATGACTATGTTGTGGAGTGATGAGGATAAGACTATGGTGGCAGCTGTATTAGGAACAAAA
GCTTTTGATTACTTGATGTCTAGTTTAGTTTCTGCTGAATGTTCTTTAATGGCAATGGGG
AGTGATGAGAATTTGCAGAATAAGCTGTCAGATCTTGTGGAACGTCCGAATGCAAGTAAT
TTTAGTTGGAATTACGCCATTTTTTGGCAGATTTCGCGGTCTAAGTTGGGGGAGTTGGTG
TTAGGATGGGGAGATGGTTGTTGTAGGGAAGCTAGGGAAGGAGAGGAATCTGAACTTACT
AGGATTCTTAATCTACGCCTCGCTGATGAGGCTCAACAAAGAATGAGGAAAAGGGTTCTT
CAGAAGTTGCATATGTTTTTTGGTGGAACAGATGAAGATAACTATGTGTTTGGATTGGAT
AAAGTCACCGATACTGAAATGTTCTTTCTTGCTTCAATGTACTTTTCGTTTCCTCGAGGG
CAAGGTGGTCCGGGGAAGTGTTTTAGTGCTGGTAAACATGTGTGGTTATCAGATATTATG
AGGTCGTCTGTAGATTATTGTTCCAGATCTTTTCTGATGAAGTCTGCTGGTATGCAAACA
GTTGTTTTGATCCCAACTGATATAGGGGTTGTGGAATTGGGATCTGTACGAACTATACCA
GAAAGTTTGGAGCTTGTACATTCAATAAAATCTTGCTTCTCGTCGTTTTTGGCTCAAGTT
AGGGCTAAGCAAGCAGCATCTGTAGCAGATGTAGCTGAGAAAAAAAATGGAAGCAATTCT
ATGTTTCCCAGCTCTTTTCCTTTTGAGCAGTCAAAGGGAAATCCTAAGATTTTTGGGCAG
AATTTAAAATCTGGTTCTACCGAGTTTAGGGAAAAACTTGCTGTCAGGAAACCGGTGGAT
AGGCCACTGGAAATGTACAGAAATGGAAACAGGGCTCCCATCATAAATACACAAAATGGT
GTACGCCCCGTAGCATGGGCTTCATTTGGTAATGTGAAGCCAGGGAACTCGGTGGAGCTC
TATAGTCCTCAGGCACCACCAAACAACTTACGAGAGTTTGTCAATGGTGGAAGGGAAGAG
CTCCGGTTAAATAGCCTCCAGCATCAAAAGCCTGGTAGAATGCAAATAGATTTCACCCAC
TCAAGACCCGTTGTTTCTCCAGTGCCCACTGTTGAATCCGAGCATTCAGATGTTGAAGTT
TCATGTAAGGAAAACCATGCAGGACCAGCTGATGAAAGGAGGCCTCGAAAGCGTGGAAGA
AAACCAGCCAATGGTAGGGAAGAGCCCCTCAATCATGTAGAAGCTGAGAGGCAACGGAGG
GAAAAGCTGAACCAGCGGTTCTATGCATTACGAGCTGTTGTTCCAAATATTTCCAAAATG
GACAAAGCTTCCCTCTTAGGAGATGCCATTGCTCACATCACTGACATGCAGAAGAGGATC
AGGGACACGGAAAATGAGCTGGAAAGGCTAGGAAGCACCTCTGTGGATGCAGCTGATATC
AACATTGAAGCTGCCAGTGATGAAGTCATTGTAAGAGCTAGTTGCCCATTGGGAACCCAT
CCTGTAGCAAAAATCGTTGAAGCGTTCAAAGAGACACAGGTCAGCGTTCTTGAGTCAAAA
CTTGCCGTGGGGAATGATACAGTATATCATACATTTGTGGTCAAGTCCAGTGGATCGGAA
CAGCTAACGAAGGAAAAGTTAATGGCTGCATTTTCTGGTGAATCAAACTCTCTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012418
PEP Infomation

pacid=37443243 transcript=PGSC0003DMT400018046 locus=PGSC0003DMG400007010 ID=PGSC0003DMT400018046.v4.03 annot-version=v4.03
Sequence

MTMLWSDEDKTMVAAVLGTKAFDYLMSSLVSAECSLMAMGSDENLQNKLSDLVERPNASN
FSWNYAIFWQISRSKLGELVLGWGDGCCREAREGEESELTRILNLRLADEAQQRMRKRVL
QKLHMFFGGTDEDNYVFGLDKVTDTEMFFLASMYFSFPRGQGGPGKCFSAGKHVWLSDIM
RSSVDYCSRSFLMKSAGMQTVVLIPTDIGVVELGSVRTIPESLELVHSIKSCFSSFLAQV
RAKQAASVADVAEKKNGSNSMFPSSFPFEQSKGNPKIFGQNLKSGSTEFREKLAVRKPVD
RPLEMYRNGNRAPIINTQNGVRPVAWASFGNVKPGNSVELYSPQAPPNNLREFVNGGREE
LRLNSLQHQKPGRMQIDFTHSRPVVSPVPTVESEHSDVEVSCKENHAGPADERRPRKRGR
KPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAHITDMQKRI
RDTENELERLGSTSVDAADINIEAASDEVIVRASCPLGTHPVAKIVEAFKETQVSVLESK
LAVGNDTVYHTFVVKSSGSEQLTKEKLMAAFSGESNSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400018046
Transcript Infomation

pacid=37443243 locus=PGSC0003DMG400007010 ID=PGSC0003DMT400018046.v4.03 annot-version=v4.03
Sequence

ATGACTATGTTGTGGAGTGATGAGGATAAGACTATGGTGGCAGCTGTATTAGGAACAAAA
GCTTTTGATTACTTGATGTCTAGTTTAGTTTCTGCTGAATGTTCTTTAATGGCAATGGGG
AGTGATGAGAATTTGCAGAATAAGCTGTCAGATCTTGTGGAACGTCCGAATGCAAGTAAT
TTTAGTTGGAATTACGCCATTTTTTGGCAGATTTCGCGGTCTAAGTTGGGGGAGTTGGTG
TTAGGATGGGGAGATGGTTGTTGTAGGGAAGCTAGGGAAGGAGAGGAATCTGAACTTACT
AGGATTCTTAATCTACGCCTCGCTGATGAGGCTCAACAAAGAATGAGGAAAAGGGTTCTT
CAGAAGTTGCATATGTTTTTTGGTGGAACAGATGAAGATAACTATGTGTTTGGATTGGAT
AAAGTCACCGATACTGAAATGTTCTTTCTTGCTTCAATGTACTTTTCGTTTCCTCGAGGG
CAAGGTGGTCCGGGGAAGTGTTTTAGTGCTGGTAAACATGTGTGGTTATCAGATATTATG
AGGTCGTCTGTAGATTATTGTTCCAGATCTTTTCTGATGAAGTCTGCTGGTATGCAAACA
GTTGTTTTGATCCCAACTGATATAGGGGTTGTGGAATTGGGATCTGTACGAACTATACCA
GAAAGTTTGGAGCTTGTACATTCAATAAAATCTTGCTTCTCGTCGTTTTTGGCTCAAGTT
AGGGCTAAGCAAGCAGCATCTGTAGCAGATGTAGCTGAGAAAAAAAATGGAAGCAATTCT
ATGTTTCCCAGCTCTTTTCCTTTTGAGCAGTCAAAGGGAAATCCTAAGATTTTTGGGCAG
AATTTAAAATCTGGTTCTACCGAGTTTAGGGAAAAACTTGCTGTCAGGAAACCGGTGGAT
AGGCCACTGGAAATGTACAGAAATGGAAACAGGGCTCCCATCATAAATACACAAAATGGT
GTACGCCCCGTAGCATGGGCTTCATTTGGTAATGTGAAGCCAGGGAACTCGGTGGAGCTC
TATAGTCCTCAGGCACCACCAAACAACTTACGAGAGTTTGTCAATGGTGGAAGGGAAGAG
CTCCGGTTAAATAGCCTCCAGCATCAAAAGCCTGGTAGAATGCAAATAGATTTCACCCAC
TCAAGACCCGTTGTTTCTCCAGTGCCCACTGTTGAATCCGAGCATTCAGATGTTGAAGTT
TCATGTAAGGAAAACCATGCAGGACCAGCTGATGAAAGGAGGCCTCGAAAGCGTGGAAGA
AAACCAGCCAATGGTAGGGAAGAGCCCCTCAATCATGTAGAAGCTGAGAGGCAACGGAGG
GAAAAGCTGAACCAGCGGTTCTATGCATTACGAGCTGTTGTTCCAAATATTTCCAAAATG
GACAAAGCTTCCCTCTTAGGAGATGCCATTGCTCACATCACTGACATGCAGAAGAGGATC
AGGGACACGGAAAATGAGCTGGAAAGGCTAGGAAGCACCTCTGTGGATGCAGCTGATATC
AACATTGAAGCTGCCAGTGATGAAGTCATTGTAAGAGCTAGTTGCCCATTGGGAACCCAT
CCTGTAGCAAAAATCGTTGAAGCGTTCAAAGAGACACAGGTCAGCGTTCTTGAGTCAAAA
CTTGCCGTGGGGAATGATACAGTATATCATACATTTGTGGTCAAGTCCAGTGGATCGGAA
CAGCTAACGAAGGAAAAGTTAATGGCTGCATTTTCTGGTGAATCAAACTCTCTCTAG