Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017984
CDS Infomation

pacid=37444716 polypeptide=PGSC0003DMP400012380 locus=PGSC0003DMG400006989 ID=PGSC0003DMT400017984.v4.03 annot-version=v4.03
Sequence

ATGAATGTGATGCGTCGCCTCAAGAGCATTGCTTCTGGACGATCTTCCGTTTCCGATCCT
GGAGGGGATATTAGCCTAAAGAGACTGAAGATTGAGCAAAAAGTAGATCACAGGGTTGAT
ATTGAAATTCAAATGGAAGAGCGATGTACTATAGCGCCAAAGGATGATGTGACTTCTACA
TCTGAGGGAAGTGATGCAAGTACATTGACTGTCGATACTAGGCAAGAAAAATCTGGAAAG
AAGGAGCTTCCAAATGAAATGAGAATTAGAGAGAAAAACTCTTATGACCACGAGGATGAC
TTAAAGGATATGGAGCCTACTGTTGTTAGTGGTAATGGAACAGAAACAGGCCAGATAATT
GTGACTACTCTGAGTGGTCGAAATGGACAGAAACAGACACTGTCTTACATGGCTGAACGT
GTGGTGGGTACGGGTTCATTTGGAGTTGTATTTCAGGCTAAGTGCCTAGAAACAGGAGAA
TCTGTGGCCATAAAGAAGGTCTTGCAGGATAGGAGATACAAGAACAGGGAACTACAGATT
ATGCGCATGCTTGATCATCCTAATGCTGTTCACCTGAGACACTGTTTCTATTCTACAACT
GAGAAGAATGAAGTTTACCTTAACCTTGTTCTGGAGTATGTGTCTGAAACTGTGTACCGA
GTTTCAAGGCACTACAGCCGAGTGAACCATCACATGCCCATCATATATGTTCAATTGTAC
ACATACCAGATATGTCGGGCTCTGAATTACATGCACAATGTAATTGGGGTATGTCACCGT
GATATTAAACCTCAGAATCTTTTGGTTAATCCACACACTCATCAGTTAAAGATATGTGAT
TTTGGAAGTGCAAAGATGCTGGTGCCTGGGGAGCCCAATATAGCCTACATTTGTTCTAGG
TATTATAGAGCGCCTGAATTGATCTTTGGGGCTACAGAGTACACAACTGCAATTGATATG
TGGTCAGCTGGTTGCGTTTTCGCTGAGCTACTTTTGGGACAGCCTCTTTTCCCTGGAGAA
AGTGGTGTTGATCAGCTGGTGGAGATAATCAAGATTTTGGGGTCACCAACTAGAGAGGAA
ATTAGGTGCATGAATCCAAACTATACAGAGTTCAAGTTTCCTCAAATCAAAGCTCACCCG
TGGCACAAGATATTTCAAAGAAAAATACCCCCTGAAGCAGTAGATCTGGCCTCAAGGTTG
CTGCAGTATTCACCAACTCTCCGATGTACTGCTTTGGAGGCATGTGCACACCCTTTCTTT
GATGATCTGAGGAAACCAAATGCTTGCTTGCCTAATGGACGACCTTTGCCACCTCTATTC
AACTTCACACCTCAAGAACTTTCTGGTGCACGTACTGAACTGAGACAACGCCTTATTCCT
GAGCACACGAGGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012380
PEP Infomation

pacid=37444716 transcript=PGSC0003DMT400017984 locus=PGSC0003DMG400006989 ID=PGSC0003DMT400017984.v4.03 annot-version=v4.03
Sequence

MNVMRRLKSIASGRSSVSDPGGDISLKRLKIEQKVDHRVDIEIQMEERCTIAPKDDVTST
SEGSDASTLTVDTRQEKSGKKELPNEMRIREKNSYDHEDDLKDMEPTVVSGNGTETGQII
VTTLSGRNGQKQTLSYMAERVVGTGSFGVVFQAKCLETGESVAIKKVLQDRRYKNRELQI
MRMLDHPNAVHLRHCFYSTTEKNEVYLNLVLEYVSETVYRVSRHYSRVNHHMPIIYVQLY
TYQICRALNYMHNVIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNIAYICSR
YYRAPELIFGATEYTTAIDMWSAGCVFAELLLGQPLFPGESGVDQLVEIIKILGSPTREE
IRCMNPNYTEFKFPQIKAHPWHKIFQRKIPPEAVDLASRLLQYSPTLRCTALEACAHPFF
DDLRKPNACLPNGRPLPPLFNFTPQELSGARTELRQRLIPEHTRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400017984
Transcript Infomation

pacid=37444716 locus=PGSC0003DMG400006989 ID=PGSC0003DMT400017984.v4.03 annot-version=v4.03
Sequence

ATGAATGTGATGCGTCGCCTCAAGAGCATTGCTTCTGGACGATCTTCCGTTTCCGATCCT
GGAGGGGATATTAGCCTAAAGAGACTGAAGATTGAGCAAAAAGTAGATCACAGGGTTGAT
ATTGAAATTCAAATGGAAGAGCGATGTACTATAGCGCCAAAGGATGATGTGACTTCTACA
TCTGAGGGAAGTGATGCAAGTACATTGACTGTCGATACTAGGCAAGAAAAATCTGGAAAG
AAGGAGCTTCCAAATGAAATGAGAATTAGAGAGAAAAACTCTTATGACCACGAGGATGAC
TTAAAGGATATGGAGCCTACTGTTGTTAGTGGTAATGGAACAGAAACAGGCCAGATAATT
GTGACTACTCTGAGTGGTCGAAATGGACAGAAACAGACACTGTCTTACATGGCTGAACGT
GTGGTGGGTACGGGTTCATTTGGAGTTGTATTTCAGGCTAAGTGCCTAGAAACAGGAGAA
TCTGTGGCCATAAAGAAGGTCTTGCAGGATAGGAGATACAAGAACAGGGAACTACAGATT
ATGCGCATGCTTGATCATCCTAATGCTGTTCACCTGAGACACTGTTTCTATTCTACAACT
GAGAAGAATGAAGTTTACCTTAACCTTGTTCTGGAGTATGTGTCTGAAACTGTGTACCGA
GTTTCAAGGCACTACAGCCGAGTGAACCATCACATGCCCATCATATATGTTCAATTGTAC
ACATACCAGATATGTCGGGCTCTGAATTACATGCACAATGTAATTGGGGTATGTCACCGT
GATATTAAACCTCAGAATCTTTTGGTTAATCCACACACTCATCAGTTAAAGATATGTGAT
TTTGGAAGTGCAAAGATGCTGGTGCCTGGGGAGCCCAATATAGCCTACATTTGTTCTAGG
TATTATAGAGCGCCTGAATTGATCTTTGGGGCTACAGAGTACACAACTGCAATTGATATG
TGGTCAGCTGGTTGCGTTTTCGCTGAGCTACTTTTGGGACAGCCTCTTTTCCCTGGAGAA
AGTGGTGTTGATCAGCTGGTGGAGATAATCAAGATTTTGGGGTCACCAACTAGAGAGGAA
ATTAGGTGCATGAATCCAAACTATACAGAGTTCAAGTTTCCTCAAATCAAAGCTCACCCG
TGGCACAAGATATTTCAAAGAAAAATACCCCCTGAAGCAGTAGATCTGGCCTCAAGGTTG
CTGCAGTATTCACCAACTCTCCGATGTACTGCTTTGGAGGCATGTGCACACCCTTTCTTT
GATGATCTGAGGAAACCAAATGCTTGCTTGCCTAATGGACGACCTTTGCCACCTCTATTC
AACTTCACACCTCAAGAACTTTCTGGTGCACGTACTGAACTGAGACAACGCCTTATTCCT
GAGCACACGAGGAAGTGA