Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017950
CDS Infomation

pacid=37424658 polypeptide=PGSC0003DMP400012353 locus=PGSC0003DMG400006970 ID=PGSC0003DMT400017950.v4.03 annot-version=v4.03
Sequence

ATGATCAAACAGATACTCAATAGGCTCCCACGGAAGCCGTCCAAGTCAGGAGACAATCGT
GATGGAGGAACTTCTGCATTTCAGTCAAATGCTTCAAATAGTTCAAGAAGCAGTGACTTG
TCTAATTCCCTACCAGGGAGTTTGAGTGCTTTATCTCTTTCAGGCGTCACTGGTTCTTCA
GCTCCAGGACTGAATCATGGAGATAGACTTCCACAGGGTATAAATGCTAAGGTGAATGGA
CATGCAGCAGTTTTCTCGTATGACGCATTGCCTAATTTGAGGGATGTACCAGCTTCTGAG
AAGCAAAACTTGTTCCTCAAAAAGCTGAACTTGTGTTGTGTCTTGTTTGACTTTTCTGAC
CCAACTAAAAACACGAAAGAAAAAGAGATCAAGCGTCAGGCATTGGTGGAGCTAGTTGAT
TATGTTACTTCTGCAAATGGGAAATTTACAGAAATAGTCATGGAAGCAGTAATTAAGATG
GTATCCACAAATTTATTCAGACCTCCTTCTCCCCAGACTCGTGAAAACAAAGTTTTGGAA
GGTTTTGACTTGGAAGATGACGAACCGATGATGCACCCTGCATGGCCTCATTTACAAATT
GTGTATGAGTTCCTTCTCAGGTTTGTGGCATCACCGGAGACTGATGCAAAATTGGCTAAG
AGATACGTTGATCACTCATTTGTTCTAAGGTTACTAGATCTTTTCGATTCAGAAGATCCA
AGAGAAAGAGAGTACCTGAAGACTGTACTTCACCGTATATATGGAAAGTTCATGGTGCAC
CGCCCATTCATTAGGAAATCAATCAACAATATATTTTATCGGTTTATTTTTGAAACTGAG
AAACATAATGGAATAGCAGAACTCTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCT
CTACCACTAAAGGAAGAGCACAAGTTGTTCCTTGTTCGAGCTCTTATTCCACATCATAAA
CCAAAATGCGTACAAATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAA
AAGGACTGCAAGCTTGCTGATACTGTCATAAGAGGTTTGTTGAAATATTGGCCTATCACA
AACAGTTCAAAGGAGGTAATGTTCATAGGTGAGCTGGAAGAGGTCTTAGAAGCAACTCAG
CCTCCAGAGTTCCAGCGCTGTATGGTTCCCTTGTTTCGTCGGATCAATCGTTGCTTGAGC
AGCTCACACTTTCAGGTGGCTGAGCGGGCTTTGTTCCTGTGGAACAATGATCATGTTGAG
AACCTAATCAAACAAAATCGTAAAGTTATATTACCAATAATCTTTCCTGCCTTGGAAAAG
AATGCGAGAGGCCACTGGAATCAGGCAGTACAAAGCTTGACATTGAATGTCCGCAAAATC
TTCTCTGATGTTGATCCTGAACTCTTTGAAGAATGTTTGCGCAAATTTGAAGAAGATCAG
GCTCATGAAGAAGAGAACAAGACAAAACGTGAAATGACTTGGAAACGGTTAGAAGAGATT
GCAGCAATGAAAACTGCTAGCAATGAGCCAGTGCTAGTTTCTCATAGGATAACTCCCAAT
TCATCCACAGGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012353
PEP Infomation

pacid=37424658 transcript=PGSC0003DMT400017950 locus=PGSC0003DMG400006970 ID=PGSC0003DMT400017950.v4.03 annot-version=v4.03
Sequence

MIKQILNRLPRKPSKSGDNRDGGTSAFQSNASNSSRSSDLSNSLPGSLSALSLSGVTGSS
APGLNHGDRLPQGINAKVNGHAAVFSYDALPNLRDVPASEKQNLFLKKLNLCCVLFDFSD
PTKNTKEKEIKRQALVELVDYVTSANGKFTEIVMEAVIKMVSTNLFRPPSPQTRENKVLE
GFDLEDDEPMMHPAWPHLQIVYEFLLRFVASPETDAKLAKRYVDHSFVLRLLDLFDSEDP
REREYLKTVLHRIYGKFMVHRPFIRKSINNIFYRFIFETEKHNGIAELLEILGSIINGFA
LPLKEEHKLFLVRALIPHHKPKCVQMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPIT
NSSKEVMFIGELEEVLEATQPPEFQRCMVPLFRRINRCLSSSHFQVAERALFLWNNDHVE
NLIKQNRKVILPIIFPALEKNARGHWNQAVQSLTLNVRKIFSDVDPELFEECLRKFEEDQ
AHEEENKTKREMTWKRLEEIAAMKTASNEPVLVSHRITPNSSTG*

Transcript Sequence

Transcript ID

PGSC0003DMT400017950
Transcript Infomation

pacid=37424658 locus=PGSC0003DMG400006970 ID=PGSC0003DMT400017950.v4.03 annot-version=v4.03
Sequence

ATGATCAAACAGATACTCAATAGGCTCCCACGGAAGCCGTCCAAGTCAGGAGACAATCGT
GATGGAGGAACTTCTGCATTTCAGTCAAATGCTTCAAATAGTTCAAGAAGCAGTGACTTG
TCTAATTCCCTACCAGGGAGTTTGAGTGCTTTATCTCTTTCAGGCGTCACTGGTTCTTCA
GCTCCAGGACTGAATCATGGAGATAGACTTCCACAGGGTATAAATGCTAAGGTGAATGGA
CATGCAGCAGTTTTCTCGTATGACGCATTGCCTAATTTGAGGGATGTACCAGCTTCTGAG
AAGCAAAACTTGTTCCTCAAAAAGCTGAACTTGTGTTGTGTCTTGTTTGACTTTTCTGAC
CCAACTAAAAACACGAAAGAAAAAGAGATCAAGCGTCAGGCATTGGTGGAGCTAGTTGAT
TATGTTACTTCTGCAAATGGGAAATTTACAGAAATAGTCATGGAAGCAGTAATTAAGATG
GTATCCACAAATTTATTCAGACCTCCTTCTCCCCAGACTCGTGAAAACAAAGTTTTGGAA
GGTTTTGACTTGGAAGATGACGAACCGATGATGCACCCTGCATGGCCTCATTTACAAATT
GTGTATGAGTTCCTTCTCAGGTTTGTGGCATCACCGGAGACTGATGCAAAATTGGCTAAG
AGATACGTTGATCACTCATTTGTTCTAAGGTTACTAGATCTTTTCGATTCAGAAGATCCA
AGAGAAAGAGAGTACCTGAAGACTGTACTTCACCGTATATATGGAAAGTTCATGGTGCAC
CGCCCATTCATTAGGAAATCAATCAACAATATATTTTATCGGTTTATTTTTGAAACTGAG
AAACATAATGGAATAGCAGAACTCTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCT
CTACCACTAAAGGAAGAGCACAAGTTGTTCCTTGTTCGAGCTCTTATTCCACATCATAAA
CCAAAATGCGTACAAATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAA
AAGGACTGCAAGCTTGCTGATACTGTCATAAGAGGTTTGTTGAAATATTGGCCTATCACA
AACAGTTCAAAGGAGGTAATGTTCATAGGTGAGCTGGAAGAGGTCTTAGAAGCAACTCAG
CCTCCAGAGTTCCAGCGCTGTATGGTTCCCTTGTTTCGTCGGATCAATCGTTGCTTGAGC
AGCTCACACTTTCAGGTGGCTGAGCGGGCTTTGTTCCTGTGGAACAATGATCATGTTGAG
AACCTAATCAAACAAAATCGTAAAGTTATATTACCAATAATCTTTCCTGCCTTGGAAAAG
AATGCGAGAGGCCACTGGAATCAGGCAGTACAAAGCTTGACATTGAATGTCCGCAAAATC
TTCTCTGATGTTGATCCTGAACTCTTTGAAGAATGTTTGCGCAAATTTGAAGAAGATCAG
GCTCATGAAGAAGAGAACAAGACAAAACGTGAAATGACTTGGAAACGGTTAGAAGAGATT
GCAGCAATGAAAACTGCTAGCAATGAGCCAGTGCTAGTTTCTCATAGGATAACTCCCAAT
TCATCCACAGGCTAG