Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017939
CDS Infomation

pacid=37424358 polypeptide=PGSC0003DMP400012343 locus=PGSC0003DMG400006967 ID=PGSC0003DMT400017939.v4.03 annot-version=v4.03
Sequence

ATGGGAGATTCAGCTTGTCTTATGCATGCCTTCTCTTATGCTTCTGCATTACCACCCAAT
GAAGCTAAACAGGGCAACCACATGCATGCTCTAGGGGAGTCTATTTCTTTTGGGAGATTT
ACGACGGAGTCATTGGCATGGGATAAATGGTCTACATTCCCTCACAAGCGTTATGTTGAG
GAAGCAGAGAGGTATGCTCAACCAGGTTCTGTTGCTCAGAAAAAAGCTTTCTTTGAAGCT
CATTACAAGAAAATTGCTGCCCAAAAGGCGGCAGCTTTGCTTGAACAAGAAAATACCCAA
CAAGATACTCTAACAGTGGATCCCAATGTCAATAGTTCCATGGAAGGAGTTGCTGATGTG
AAGGAGAAAGAAAATGCCGCGCCTTTAGCACATGCAGCTTCATTGAAACAACCCCAAGAA
ACATTTTCAGGATCAGAGCTTAGTGAAATATCTCATACAGAAAAACCTTTGCTGAAGAGT
TCCAGCTCTAAGCAAGACGATGATGTTACATCTGCGACGAGCAAGAAAAAATCAGCTTTT
TCTTCATTCAAATCATCAGTTCACTCTATAAAGTCTAAAATTCCACCTTCGCCAGCTAGG
CATAACATTTCTCGTCTTGTCAATAAAGAAAACAATTTCACTCCAATCACAAAGAATCCC
ACATCAGCGTTCACAAATGAAAAGAAATCAACCTCGAAATCTTTGAGCAGATTGATGAAT
TTCACTCCTGCCAAAGAGACAGATAAGGTGCCTCCTCCTCTCCCTCCCACATTCAAGAAG
GAAAGTTCAAAGATCGCTCCCAATGCCGCGAAGAAGTGTATAACTCCTCTAAAGACTCCT
GTGGAAACTTCAGATGGTGCAGCCAAACATCCTATGACAACCCCATCTTCTGAAAATAGA
AGGATGGAAACACCAATTCATCCATCAGCCTCAGGAAGTCAAACAACCGGTCCTAAATGG
AATATATTGTCATCTGTTTGTTCCAAGTCTTTAACAGCCTGCCGTAACAAACTACAATCG
CCCTCTTTATCGACTCCTTTTCTACTGAGGACAGAAGAAAGAGCTGCAAGAAGGAAACAA
AAGCTTGAGGAGAAATTCAATGCAAAGGAGGTACAGAAAGTTCAGCTACAAACAAAAATA
AAGGAGAAAGCTGAAATGGAGCTCAGGAAACTTCGACAAAGCTTTTGTTTCAGAGCTCGT
CCCCTGCCTAAGTTTTACAAGGAAAGAGAAACAGCAAGAAATTACACAAAAAAGACCCCG
GTTAAACGTCCTCAGTCACCAAAACTTGGAAGAAATCCCAGTAACAGCACAATGCAAGAC
TTGGCGTCACACCCAACCTCTACATATTCAGGCAAGAATTGCTCTTACAAGTATTCAGGA
AAGAAGAATTGCCCAATATCGATAAATTCTCATACCTTGTCAACAGTAATGTCTCATGAT
CAGAACGCATCCCCAAATATACAACATCAATTTGGAGTCATAGATGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400012343
PEP Infomation

pacid=37424358 transcript=PGSC0003DMT400017939 locus=PGSC0003DMG400006967 ID=PGSC0003DMT400017939.v4.03 annot-version=v4.03
Sequence

MGDSACLMHAFSYASALPPNEAKQGNHMHALGESISFGRFTTESLAWDKWSTFPHKRYVE
EAERYAQPGSVAQKKAFFEAHYKKIAAQKAAALLEQENTQQDTLTVDPNVNSSMEGVADV
KEKENAAPLAHAASLKQPQETFSGSELSEISHTEKPLLKSSSSKQDDDVTSATSKKKSAF
SSFKSSVHSIKSKIPPSPARHNISRLVNKENNFTPITKNPTSAFTNEKKSTSKSLSRLMN
FTPAKETDKVPPPLPPTFKKESSKIAPNAAKKCITPLKTPVETSDGAAKHPMTTPSSENR
RMETPIHPSASGSQTTGPKWNILSSVCSKSLTACRNKLQSPSLSTPFLLRTEERAARRKQ
KLEEKFNAKEVQKVQLQTKIKEKAEMELRKLRQSFCFRARPLPKFYKERETARNYTKKTP
VKRPQSPKLGRNPSNSTMQDLASHPTSTYSGKNCSYKYSGKKNCPISINSHTLSTVMSHD
QNASPNIQHQFGVIDV*

Transcript Sequence

Transcript ID

PGSC0003DMT400017939
Transcript Infomation

pacid=37424358 locus=PGSC0003DMG400006967 ID=PGSC0003DMT400017939.v4.03 annot-version=v4.03
Sequence

ATGGGAGATTCAGCTTGTCTTATGCATGCCTTCTCTTATGCTTCTGCATTACCACCCAAT
GAAGCTAAACAGGGCAACCACATGCATGCTCTAGGGGAGTCTATTTCTTTTGGGAGATTT
ACGACGGAGTCATTGGCATGGGATAAATGGTCTACATTCCCTCACAAGCGTTATGTTGAG
GAAGCAGAGAGGTATGCTCAACCAGGTTCTGTTGCTCAGAAAAAAGCTTTCTTTGAAGCT
CATTACAAGAAAATTGCTGCCCAAAAGGCGGCAGCTTTGCTTGAACAAGAAAATACCCAA
CAAGATACTCTAACAGTGGATCCCAATGTCAATAGTTCCATGGAAGGAGTTGCTGATGTG
AAGGAGAAAGAAAATGCCGCGCCTTTAGCACATGCAGCTTCATTGAAACAACCCCAAGAA
ACATTTTCAGGATCAGAGCTTAGTGAAATATCTCATACAGAAAAACCTTTGCTGAAGAGT
TCCAGCTCTAAGCAAGACGATGATGTTACATCTGCGACGAGCAAGAAAAAATCAGCTTTT
TCTTCATTCAAATCATCAGTTCACTCTATAAAGTCTAAAATTCCACCTTCGCCAGCTAGG
CATAACATTTCTCGTCTTGTCAATAAAGAAAACAATTTCACTCCAATCACAAAGAATCCC
ACATCAGCGTTCACAAATGAAAAGAAATCAACCTCGAAATCTTTGAGCAGATTGATGAAT
TTCACTCCTGCCAAAGAGACAGATAAGGTGCCTCCTCCTCTCCCTCCCACATTCAAGAAG
GAAAGTTCAAAGATCGCTCCCAATGCCGCGAAGAAGTGTATAACTCCTCTAAAGACTCCT
GTGGAAACTTCAGATGGTGCAGCCAAACATCCTATGACAACCCCATCTTCTGAAAATAGA
AGGATGGAAACACCAATTCATCCATCAGCCTCAGGAAGTCAAACAACCGGTCCTAAATGG
AATATATTGTCATCTGTTTGTTCCAAGTCTTTAACAGCCTGCCGTAACAAACTACAATCG
CCCTCTTTATCGACTCCTTTTCTACTGAGGACAGAAGAAAGAGCTGCAAGAAGGAAACAA
AAGCTTGAGGAGAAATTCAATGCAAAGGAGGTACAGAAAGTTCAGCTACAAACAAAAATA
AAGGAGAAAGCTGAAATGGAGCTCAGGAAACTTCGACAAAGCTTTTGTTTCAGAGCTCGT
CCCCTGCCTAAGTTTTACAAGGAAAGAGAAACAGCAAGAAATTACACAAAAAAGACCCCG
GTTAAACGTCCTCAGTCACCAAAACTTGGAAGAAATCCCAGTAACAGCACAATGCAAGAC
TTGGCGTCACACCCAACCTCTACATATTCAGGCAAGAATTGCTCTTACAAGTATTCAGGA
AAGAAGAATTGCCCAATATCGATAAATTCTCATACCTTGTCAACAGTAATGTCTCATGAT
CAGAACGCATCCCCAAATATACAACATCAATTTGGAGTCATAGATGTATAA