Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017921
CDS Infomation

pacid=37428331 polypeptide=PGSC0003DMP400012328 locus=PGSC0003DMG400006960 ID=PGSC0003DMT400017921.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAATGGTGGTGGAAGCTCTCCTCTTTGGTGATAGACAAGCACAGCTCCTTGCT
GCAAGACAACTTGCTCAATTTTCCAACAAGCAAAGGCACAAAATAGCCGAAAAAGGCGTT
GTTCCTCCATTGATTTTGATGTTGAGTACTAATGATTGTGAAGTCATTGAAGCTGCACTC
TTTGCTCTGCTTAGCATAGCATTTCGCAGTGAAAGGAACAAGACACTCATAGCAAAATCA
GGGGGTATAACAGTGTTATTAGATGTAATTCAATGCGAAAACAAGTTGTTAGTAGAGCTA
GGAGTGGCATTTCTCCTGACCCTCTCTTCTTGTGGTTCAAACAAGATGGAAATTGCTTCA
TTTGGGGCTATCCCAATTCTACTTGAATTGTTAAATTCACAATCCTACAACAACATAAGC
TTCCAGGCTAATTTGGATATCTTGTCAACACTTCACAATCTTTCAACTTGCAATCAGCTT
ATTCCTTCCATTGTTTCATATGGAGGGGTAGCTACCTTGATCCGACTAATCAAACTTACC
TCGGAGTTGGTAATGGAAAAAACTGTGGCGTTGCTAGAGAATCTTGTTTCTTCATCAAGA
ATTGCACTAGAGGAAGCTGCAAGAACAGAGGGAGCAATCCAGTGTTTGGTGGAGGCCATG
GAGGAAGGTTCAAGACAATGTAAAGAACATGCAGTGACAATTCTACTCCTAATATGCGAT
AGCTGCAGAGACAGATACAGAGGAATGATCTTAAGGGAAGGAGCAATGGCAGCATTGCTT
CAGTTGAGCGTTGATGGGACAAGGAGAGCAAGAGACAAGGCAAAAAGACTGCTTTTTCTT
CTAAGAGACTGTTCAAATTGTGGCCAAACGAGTAATCAGACGAAGAATATTGTGTTATTT
GAGCAGATTATGAGACAGATTGAGCAAGTAGGAGAACCAGAAGGGATGTCACTAGCTCTC
TTAGAGGAAATGATTTCAAAACTTAGAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400012328
PEP Infomation

pacid=37428331 transcript=PGSC0003DMT400017921 locus=PGSC0003DMG400006960 ID=PGSC0003DMT400017921.v4.03 annot-version=v4.03
Sequence

MEEMVVEALLFGDRQAQLLAARQLAQFSNKQRHKIAEKGVVPPLILMLSTNDCEVIEAAL
FALLSIAFRSERNKTLIAKSGGITVLLDVIQCENKLLVELGVAFLLTLSSCGSNKMEIAS
FGAIPILLELLNSQSYNNISFQANLDILSTLHNLSTCNQLIPSIVSYGGVATLIRLIKLT
SELVMEKTVALLENLVSSSRIALEEAARTEGAIQCLVEAMEEGSRQCKEHAVTILLLICD
SCRDRYRGMILREGAMAALLQLSVDGTRRARDKAKRLLFLLRDCSNCGQTSNQTKNIVLF
EQIMRQIEQVGEPEGMSLALLEEMISKLRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400017921
Transcript Infomation

pacid=37428331 locus=PGSC0003DMG400006960 ID=PGSC0003DMT400017921.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAATGGTGGTGGAAGCTCTCCTCTTTGGTGATAGACAAGCACAGCTCCTTGCT
GCAAGACAACTTGCTCAATTTTCCAACAAGCAAAGGCACAAAATAGCCGAAAAAGGCGTT
GTTCCTCCATTGATTTTGATGTTGAGTACTAATGATTGTGAAGTCATTGAAGCTGCACTC
TTTGCTCTGCTTAGCATAGCATTTCGCAGTGAAAGGAACAAGACACTCATAGCAAAATCA
GGGGGTATAACAGTGTTATTAGATGTAATTCAATGCGAAAACAAGTTGTTAGTAGAGCTA
GGAGTGGCATTTCTCCTGACCCTCTCTTCTTGTGGTTCAAACAAGATGGAAATTGCTTCA
TTTGGGGCTATCCCAATTCTACTTGAATTGTTAAATTCACAATCCTACAACAACATAAGC
TTCCAGGCTAATTTGGATATCTTGTCAACACTTCACAATCTTTCAACTTGCAATCAGCTT
ATTCCTTCCATTGTTTCATATGGAGGGGTAGCTACCTTGATCCGACTAATCAAACTTACC
TCGGAGTTGGTAATGGAAAAAACTGTGGCGTTGCTAGAGAATCTTGTTTCTTCATCAAGA
ATTGCACTAGAGGAAGCTGCAAGAACAGAGGGAGCAATCCAGTGTTTGGTGGAGGCCATG
GAGGAAGGTTCAAGACAATGTAAAGAACATGCAGTGACAATTCTACTCCTAATATGCGAT
AGCTGCAGAGACAGATACAGAGGAATGATCTTAAGGGAAGGAGCAATGGCAGCATTGCTT
CAGTTGAGCGTTGATGGGACAAGGAGAGCAAGAGACAAGGCAAAAAGACTGCTTTTTCTT
CTAAGAGACTGTTCAAATTGTGGCCAAACGAGTAATCAGACGAAGAATATTGTGTTATTT
GAGCAGATTATGAGACAGATTGAGCAAGTAGGAGAACCAGAAGGGATGTCACTAGCTCTC
TTAGAGGAAATGATTTCAAAACTTAGAACATGA