Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017886
CDS Infomation

pacid=37425908 polypeptide=PGSC0003DMP400012305 locus=PGSC0003DMG400006945 ID=PGSC0003DMT400017886.v4.03 annot-version=v4.03
Sequence

ATGTCAAATTCTCCAAAGGCCAAGATGAGCCAAGTTTCCATGTTTAGTAGTGGCCAAGAA
TTTGCAAATTTGTTGGTGAGCTCAGATCTACTTCTTCATTCTTGGTTTACAATCTCTGAC
CTTAGGAATCATCCTTATTTGAATAATCCAATTTTGGTTAAAGTTTACCCATATCATTCA
AATGGTGCTATTGTTGCTTTTGTATCCTCTCCTACTTGTACTCTTCAGAAAGAAATGGTC
TCTTCAGAAGATCTGGAAGGTTCTCAATCTCCTTTTGACTTCATTTCTACCAAATTCAAC
CCTCATTTCTCAGTTAACAAAGCAGCAATAACCCTTTTTGAGTCATTACTGAATGAGCTC
TCTGCCCTCAAAGAACAGTTGGGCAATGTCAGTCCTCTAATAATCACTGGAGTTTCTTTG
GGAGGTTCTGTGGCATCTCTTTTCACTCTCTGGCTACTTAAGGACAATAATAAGCGTCCT
ACTTGCATCACTTTTGGTTCACCTCTTCTTGGTGATAGTGGCCGGCAACAAGCCATATCA
GAACGTCCATCATGGAATTCAAGCTTCTTGCACGTAGTCTCGAACCATGATCCAATCCTA
AGATCTTTAATTTCACCAACTAATGCCTTTGCTGGTTCTATTCCTCAATCTTGTATTTAC
AATCCATTCGGCATGTTTCTGCTGTGCTCAGATTCAGACTGCTCCTGTTTTGAGGAGCCT
GAGTCAGTTTTGGATATTATGATGGAAATGAACTTAAATAGCCAACACCAGGACAATCGT
TTCTTGGCTTTCGACTATGAACAGGTTTTGGAACTCCTCAAGCATAGAGTAATCTTTAAG
GGTACTTCTCAGCTGTTTCACTATAGCGTGGATCAACTTCAAGCAGGCATTGATCTACAG
CTAGAAGCAATCGGAATTGGTGGACAGCAGTCAAGTAACATGAACCCTCTAAGGACTGAA
GTGAAGCAAAGAGTGAAAGAATCTTTCGACAAGAAGAAGGATGCCTTTGATCCTGGCAAG
AAGCTAAACAAAATGAAAGAAGCTATGGCATGGCTAGAGTGGTACAAGAAAGTAACCCTG
AAAGAAGGAGGCTACTATGATAGTTTTAAACGCAGTGAGTATCGAGGCAGGGATGCTGTC
AAAAGCAGACAAGAAATTGTCAAGCACCAAAGAATCCTCACTAGGTACTGGAAAACAATG
GTTGCAGAAGTAGAGAAAATGCCACAAAGAGAGGAGACAGCTTTTCGTACTCGTTGGCTG
TATGCAGGGACAAACTATAGAAGGATGGTCGAACCACTCGACATAGCGGAATACTATATG
AAATCGGGGAACACAGACTATGTAAATCTTGGAAGATCCGAGCACTATAAAAAGTTGGAG
GAATGGAGGAAAGAAGACAACCCGTCTGGAAGTGGTAACTATAGAAGGAAGTCCGTTAGC
CTCACCGAAGATTCTTGCTTTTGGGCGTATGTGGAGGAAGCTATTATAAATTCCAAAAGA
CTGAGAGAAGGCAGTCTAGAAGAGAAGGAAAATGCAATGGCGTATTTGGTTAAATTTGGG
GGAAATGTAATGACTATGATATGGAGCTATTCAGTATCCTCTGAGATTTTCCAGCCTCAG
AGTAGCTTCATGAATTGGTGGCAAGAATATAGGCAAGATATTCTAAGATGTTTGAGTAAT
TTTCCTTTGGCCAATTACATGGACAATGAAGTTTATCGAAGTTATGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400012305
PEP Infomation

pacid=37425908 transcript=PGSC0003DMT400017886 locus=PGSC0003DMG400006945 ID=PGSC0003DMT400017886.v4.03 annot-version=v4.03
Sequence

MSNSPKAKMSQVSMFSSGQEFANLLVSSDLLLHSWFTISDLRNHPYLNNPILVKVYPYHS
NGAIVAFVSSPTCTLQKEMVSSEDLEGSQSPFDFISTKFNPHFSVNKAAITLFESLLNEL
SALKEQLGNVSPLIITGVSLGGSVASLFTLWLLKDNNKRPTCITFGSPLLGDSGRQQAIS
ERPSWNSSFLHVVSNHDPILRSLISPTNAFAGSIPQSCIYNPFGMFLLCSDSDCSCFEEP
ESVLDIMMEMNLNSQHQDNRFLAFDYEQVLELLKHRVIFKGTSQLFHYSVDQLQAGIDLQ
LEAIGIGGQQSSNMNPLRTEVKQRVKESFDKKKDAFDPGKKLNKMKEAMAWLEWYKKVTL
KEGGYYDSFKRSEYRGRDAVKSRQEIVKHQRILTRYWKTMVAEVEKMPQREETAFRTRWL
YAGTNYRRMVEPLDIAEYYMKSGNTDYVNLGRSEHYKKLEEWRKEDNPSGSGNYRRKSVS
LTEDSCFWAYVEEAIINSKRLREGSLEEKENAMAYLVKFGGNVMTMIWSYSVSSEIFQPQ
SSFMNWWQEYRQDILRCLSNFPLANYMDNEVYRSYA*

Transcript Sequence

Transcript ID

PGSC0003DMT400017886
Transcript Infomation

pacid=37425908 locus=PGSC0003DMG400006945 ID=PGSC0003DMT400017886.v4.03 annot-version=v4.03
Sequence

ATGTCAAATTCTCCAAAGGCCAAGATGAGCCAAGTTTCCATGTTTAGTAGTGGCCAAGAA
TTTGCAAATTTGTTGGTGAGCTCAGATCTACTTCTTCATTCTTGGTTTACAATCTCTGAC
CTTAGGAATCATCCTTATTTGAATAATCCAATTTTGGTTAAAGTTTACCCATATCATTCA
AATGGTGCTATTGTTGCTTTTGTATCCTCTCCTACTTGTACTCTTCAGAAAGAAATGGTC
TCTTCAGAAGATCTGGAAGGTTCTCAATCTCCTTTTGACTTCATTTCTACCAAATTCAAC
CCTCATTTCTCAGTTAACAAAGCAGCAATAACCCTTTTTGAGTCATTACTGAATGAGCTC
TCTGCCCTCAAAGAACAGTTGGGCAATGTCAGTCCTCTAATAATCACTGGAGTTTCTTTG
GGAGGTTCTGTGGCATCTCTTTTCACTCTCTGGCTACTTAAGGACAATAATAAGCGTCCT
ACTTGCATCACTTTTGGTTCACCTCTTCTTGGTGATAGTGGCCGGCAACAAGCCATATCA
GAACGTCCATCATGGAATTCAAGCTTCTTGCACGTAGTCTCGAACCATGATCCAATCCTA
AGATCTTTAATTTCACCAACTAATGCCTTTGCTGGTTCTATTCCTCAATCTTGTATTTAC
AATCCATTCGGCATGTTTCTGCTGTGCTCAGATTCAGACTGCTCCTGTTTTGAGGAGCCT
GAGTCAGTTTTGGATATTATGATGGAAATGAACTTAAATAGCCAACACCAGGACAATCGT
TTCTTGGCTTTCGACTATGAACAGGTTTTGGAACTCCTCAAGCATAGAGTAATCTTTAAG
GGTACTTCTCAGCTGTTTCACTATAGCGTGGATCAACTTCAAGCAGGCATTGATCTACAG
CTAGAAGCAATCGGAATTGGTGGACAGCAGTCAAGTAACATGAACCCTCTAAGGACTGAA
GTGAAGCAAAGAGTGAAAGAATCTTTCGACAAGAAGAAGGATGCCTTTGATCCTGGCAAG
AAGCTAAACAAAATGAAAGAAGCTATGGCATGGCTAGAGTGGTACAAGAAAGTAACCCTG
AAAGAAGGAGGCTACTATGATAGTTTTAAACGCAGTGAGTATCGAGGCAGGGATGCTGTC
AAAAGCAGACAAGAAATTGTCAAGCACCAAAGAATCCTCACTAGGTACTGGAAAACAATG
GTTGCAGAAGTAGAGAAAATGCCACAAAGAGAGGAGACAGCTTTTCGTACTCGTTGGCTG
TATGCAGGGACAAACTATAGAAGGATGGTCGAACCACTCGACATAGCGGAATACTATATG
AAATCGGGGAACACAGACTATGTAAATCTTGGAAGATCCGAGCACTATAAAAAGTTGGAG
GAATGGAGGAAAGAAGACAACCCGTCTGGAAGTGGTAACTATAGAAGGAAGTCCGTTAGC
CTCACCGAAGATTCTTGCTTTTGGGCGTATGTGGAGGAAGCTATTATAAATTCCAAAAGA
CTGAGAGAAGGCAGTCTAGAAGAGAAGGAAAATGCAATGGCGTATTTGGTTAAATTTGGG
GGAAATGTAATGACTATGATATGGAGCTATTCAGTATCCTCTGAGATTTTCCAGCCTCAG
AGTAGCTTCATGAATTGGTGGCAAGAATATAGGCAAGATATTCTAAGATGTTTGAGTAAT
TTTCCTTTGGCCAATTACATGGACAATGAAGTTTATCGAAGTTATGCTTAG