Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017859
CDS Infomation

pacid=37425993 polypeptide=PGSC0003DMP400012281 locus=PGSC0003DMG402006935 ID=PGSC0003DMT400017859.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAAATTGGATAATTCCATCTCAAGAGCTAATAATCATGAAGAAGAAGATATC
AAAAAAGCTTTAAAGGATGATGAATTCAAGTCAGCCATAGCAGAAGTGAACGAAATCAAA
CTAGAGAACGCAAGATTAAAGTTGTTGCTTCAACAAATAGAAAAAGATTACACGTCTCTC
CAAACTCGCTTTTTCAATATTTGTCAACCAGATCTCAAGAAGAGTGGCAGCCCAACATGT
ACTCATGAAAACATTGCAGATGAAGAAGAATCTGAACTTGTCTCGCTTAGACTCGGGCGA
AGTCCGAGTCCAAGCGAGTCCAAAAAAGTTGATAAGAAAAGAAGTTATGACAAGACAATA
GAGGACTATCCTTCTTGTGATGGTCAGTCCAATGATGGGCTCAAACTTGGGCTGGACTAT
AGCACTAGAATATCTGAGCCAGATCTTATAAAGCCCAGTAATGATCCAACCCCAGGCCCA
ACTAGTGAAGTTGTCAAGACAGTGAAAAGATGTGATGATGAAAGTGTCAAAAAGGATGCT
GGTGATGATGAAGTTTCTCAGCCTAATGTCAAGAGAGCTCGAGTTTCAGTTCGGACAAAA
TGCGATTACCCAACAATAAATGATGGTTGTCAATGGAGGAAATATGGACAAAAGATATCT
AGAGGTAACCCGTGTCCACGATCATATTATCGTTGCTCAGTGGCTCCATTATGCCCCGTG
AGGAAACAAGTCCAACGATGTCTCGAAGACATGTCTATATTGATCACAACATATGAAGGA
ACACATAATCATTCACTTCCTATTGAAGCCACAGCTATGGCCTCTACAACTTCTGCTGCA
GCCTCTATGCTTCTTTCGGGTTCATCAACAAGTTCAAAAAATTTCCCAAATTTGCCTAAT
ATTTCGAAAACTACACCTCTCTATTTATCCAATTCATCTTCAAATCCTTTTCCCACCATC
ACATTAGACTTCACCACATTCCCAACTACTTCATCATTCACTAGTTTCAATTTCCCTTCC
AATTTCCAATCCGGTTCAGGATTTCTCTCTAACAGCTTAAGCTTTTCCTCGCCTGAGTCG
ACCACAATGACCAAAATTTTGGGGAATGGGGGTCTAAATTATGATTCTACTAGTACATTA
CCATATCACAATAACCTCATAAACATTGGATCATCCCAAAAACAATTTGACACCAGTAGT
AATAAATTGAAGGAGGATTCTTCTCAACAGGCACTAACTGAAACATTGACAAAGGCAATT
ACATCAGATCCTAGCTTTCAATCAGTGCTAGCTGCTGCTATTTCATCAATGGTTGGTGCC
ACCAAAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400012281
PEP Infomation

pacid=37425993 transcript=PGSC0003DMT400017859 locus=PGSC0003DMG402006935 ID=PGSC0003DMT400017859.v4.03 annot-version=v4.03
Sequence

MEKKLDNSISRANNHEEEDIKKALKDDEFKSAIAEVNEIKLENARLKLLLQQIEKDYTSL
QTRFFNICQPDLKKSGSPTCTHENIADEEESELVSLRLGRSPSPSESKKVDKKRSYDKTI
EDYPSCDGQSNDGLKLGLDYSTRISEPDLIKPSNDPTPGPTSEVVKTVKRCDDESVKKDA
GDDEVSQPNVKRARVSVRTKCDYPTINDGCQWRKYGQKISRGNPCPRSYYRCSVAPLCPV
RKQVQRCLEDMSILITTYEGTHNHSLPIEATAMASTTSAAASMLLSGSSTSSKNFPNLPN
ISKTTPLYLSNSSSNPFPTITLDFTTFPTTSSFTSFNFPSNFQSGSGFLSNSLSFSSPES
TTMTKILGNGGLNYDSTSTLPYHNNLINIGSSQKQFDTSSNKLKEDSSQQALTETLTKAI
TSDPSFQSVLAAAISSMVGATKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400017859
Transcript Infomation

pacid=37425993 locus=PGSC0003DMG402006935 ID=PGSC0003DMT400017859.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAAATTGGATAATTCCATCTCAAGAGCTAATAATCATGAAGAAGAAGATATC
AAAAAAGCTTTAAAGGATGATGAATTCAAGTCAGCCATAGCAGAAGTGAACGAAATCAAA
CTAGAGAACGCAAGATTAAAGTTGTTGCTTCAACAAATAGAAAAAGATTACACGTCTCTC
CAAACTCGCTTTTTCAATATTTGTCAACCAGATCTCAAGAAGAGTGGCAGCCCAACATGT
ACTCATGAAAACATTGCAGATGAAGAAGAATCTGAACTTGTCTCGCTTAGACTCGGGCGA
AGTCCGAGTCCAAGCGAGTCCAAAAAAGTTGATAAGAAAAGAAGTTATGACAAGACAATA
GAGGACTATCCTTCTTGTGATGGTCAGTCCAATGATGGGCTCAAACTTGGGCTGGACTAT
AGCACTAGAATATCTGAGCCAGATCTTATAAAGCCCAGTAATGATCCAACCCCAGGCCCA
ACTAGTGAAGTTGTCAAGACAGTGAAAAGATGTGATGATGAAAGTGTCAAAAAGGATGCT
GGTGATGATGAAGTTTCTCAGCCTAATGTCAAGAGAGCTCGAGTTTCAGTTCGGACAAAA
TGCGATTACCCAACAATAAATGATGGTTGTCAATGGAGGAAATATGGACAAAAGATATCT
AGAGGTAACCCGTGTCCACGATCATATTATCGTTGCTCAGTGGCTCCATTATGCCCCGTG
AGGAAACAAGTCCAACGATGTCTCGAAGACATGTCTATATTGATCACAACATATGAAGGA
ACACATAATCATTCACTTCCTATTGAAGCCACAGCTATGGCCTCTACAACTTCTGCTGCA
GCCTCTATGCTTCTTTCGGGTTCATCAACAAGTTCAAAAAATTTCCCAAATTTGCCTAAT
ATTTCGAAAACTACACCTCTCTATTTATCCAATTCATCTTCAAATCCTTTTCCCACCATC
ACATTAGACTTCACCACATTCCCAACTACTTCATCATTCACTAGTTTCAATTTCCCTTCC
AATTTCCAATCCGGTTCAGGATTTCTCTCTAACAGCTTAAGCTTTTCCTCGCCTGAGTCG
ACCACAATGACCAAAATTTTGGGGAATGGGGGTCTAAATTATGATTCTACTAGTACATTA
CCATATCACAATAACCTCATAAACATTGGATCATCCCAAAAACAATTTGACACCAGTAGT
AATAAATTGAAGGAGGATTCTTCTCAACAGGCACTAACTGAAACATTGACAAAGGCAATT
ACATCAGATCCTAGCTTTCAATCAGTGCTAGCTGCTGCTATTTCATCAATGGTTGGTGCC
ACCAAAACTTGA