Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017853
CDS Infomation

pacid=37426986 polypeptide=PGSC0003DMP400012278 locus=PGSC0003DMG400006934 ID=PGSC0003DMT400017853.v4.03 annot-version=v4.03
Sequence

ATGGGTTGCACCAATTCAAAGCCAAAAGTATGCCAAAAATGCAATGCACAGTATTATTCT
CCAGTGCATCGAAGCTACTCGATGAACAAACGTATTCCTATCGATAAAGAAGACTGTAGC
ATCCACTTGGTCTCTCTCACTTCCTCAACACTAGGATCTTTGAGACTTGATCCACTGAAA
CAACATATCAAAGATGATGAATTAATGTTCAAAAAAGATGAAGAGTTGGAAATGGGGCTA
ATTCAGACAAAGACATGGTCTCAAATGATCAATGAGAAAATCCCAAAAGTGATTCCTAAG
ACTACAATTACAACTTCTCCTGGTGGTGAACCACAGAGTGTCAATGTTTGGGAATTGATG
GAAGATCTTGAAGATATTAATCTTCTTGCATCTCCTCATCGTGTCTGTAGATTTTCTTTC
GATGTCTTGGATAATCCTTATGATCAGCTTACGCCTCAACTGAAATCAAACTGTGGAGTT
GCTGATCTTAAATTGGTGCAACAGAATAAAGACAGAGTGATTTTATACTTCACTAGCCTG
AGAGGAGTGAGGAAAACGTATGAGGATTGTTGTCGTGTTCGGATGATTTTGAAGGGACTA
GGTGTTAAGGTCGATGAAAGAGATGTATCGATGCATGCAGGGTTTAAGAAGGAATTGAAA
GAGTTACTACCAGGGGAAGGATACATGCTGCCAAGGGTATTTCTGGGGAGAAAATACATT
GGTGGGGTTGATGAAATATGCAGAATGGACGAAAACGGACAACTTGAGAAGGTAGTAGAA
AGCTGTCAAAGGGTAGAAAATGGAGTTTGTGAGAGCTGTGGAGATGTTAGGTTTGTGCCA
TGTGAGACATGCTATGGAAGTTGTAAAATATACTATGAAGCAGAGTATGATGAAGAAGAT
GAGTGTGGTTTCCAACGATGCCCAGATTGCAACGAAAATGGGCTTATACAATGTCCGATT
TGTTGTGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400012278
PEP Infomation

pacid=37426986 transcript=PGSC0003DMT400017853 locus=PGSC0003DMG400006934 ID=PGSC0003DMT400017853.v4.03 annot-version=v4.03
Sequence

MGCTNSKPKVCQKCNAQYYSPVHRSYSMNKRIPIDKEDCSIHLVSLTSSTLGSLRLDPLK
QHIKDDELMFKKDEELEMGLIQTKTWSQMINEKIPKVIPKTTITTSPGGEPQSVNVWELM
EDLEDINLLASPHRVCRFSFDVLDNPYDQLTPQLKSNCGVADLKLVQQNKDRVILYFTSL
RGVRKTYEDCCRVRMILKGLGVKVDERDVSMHAGFKKELKELLPGEGYMLPRVFLGRKYI
GGVDEICRMDENGQLEKVVESCQRVENGVCESCGDVRFVPCETCYGSCKIYYEAEYDEED
ECGFQRCPDCNENGLIQCPICCD*

Transcript Sequence

Transcript ID

PGSC0003DMT400017853
Transcript Infomation

pacid=37426986 locus=PGSC0003DMG400006934 ID=PGSC0003DMT400017853.v4.03 annot-version=v4.03
Sequence

ATGGGTTGCACCAATTCAAAGCCAAAAGTATGCCAAAAATGCAATGCACAGTATTATTCT
CCAGTGCATCGAAGCTACTCGATGAACAAACGTATTCCTATCGATAAAGAAGACTGTAGC
ATCCACTTGGTCTCTCTCACTTCCTCAACACTAGGATCTTTGAGACTTGATCCACTGAAA
CAACATATCAAAGATGATGAATTAATGTTCAAAAAAGATGAAGAGTTGGAAATGGGGCTA
ATTCAGACAAAGACATGGTCTCAAATGATCAATGAGAAAATCCCAAAAGTGATTCCTAAG
ACTACAATTACAACTTCTCCTGGTGGTGAACCACAGAGTGTCAATGTTTGGGAATTGATG
GAAGATCTTGAAGATATTAATCTTCTTGCATCTCCTCATCGTGTCTGTAGATTTTCTTTC
GATGTCTTGGATAATCCTTATGATCAGCTTACGCCTCAACTGAAATCAAACTGTGGAGTT
GCTGATCTTAAATTGGTGCAACAGAATAAAGACAGAGTGATTTTATACTTCACTAGCCTG
AGAGGAGTGAGGAAAACGTATGAGGATTGTTGTCGTGTTCGGATGATTTTGAAGGGACTA
GGTGTTAAGGTCGATGAAAGAGATGTATCGATGCATGCAGGGTTTAAGAAGGAATTGAAA
GAGTTACTACCAGGGGAAGGATACATGCTGCCAAGGGTATTTCTGGGGAGAAAATACATT
GGTGGGGTTGATGAAATATGCAGAATGGACGAAAACGGACAACTTGAGAAGGTAGTAGAA
AGCTGTCAAAGGGTAGAAAATGGAGTTTGTGAGAGCTGTGGAGATGTTAGGTTTGTGCCA
TGTGAGACATGCTATGGAAGTTGTAAAATATACTATGAAGCAGAGTATGATGAAGAAGAT
GAGTGTGGTTTCCAACGATGCCCAGATTGCAACGAAAATGGGCTTATACAATGTCCGATT
TGTTGTGACTAA