Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400017849
CDS Infomation

pacid=37427720 polypeptide=PGSC0003DMP400012274 locus=PGSC0003DMG400006931 ID=PGSC0003DMT400017849.v4.03 annot-version=v4.03
Sequence

ATGGAAGTGATAATAGTATCATCTAACGCAAAAGCACCTTTTCACCCGCATACAAATCAA
CCAGCCATTCTCAATAACTCTGTCTTTTTGGGCCGTCGAGAGCTCTGCTTCGATAGCATT
TCCTCTGTCTGCTCTGCTGATCCCATTAATTCTAATCCATCTACCTCTCCTTCCACTCCC
AGGATTGGTGGAGATAATGGCAATTCTTTGATTGAGCAACGCTTCCCTTTTGCCACACGG
AGGATGTTGTTAACAAGCTTTTTCATGTATTCACTTTATCATCCTTCAAGGTACTTGTCA
GCACTTGCTTTGGGGGATCCGTCTGTCACAGTTGAACAAGTTACACCTTCTACTTTTCCT
TCTGCAGAACTTTTCCCTTCCGAGGAAAGAGTTGTTGAGCTCTTTGAGAAGAACACTTAC
TGTGTTGTCAACATATTTGATGTAACCTTGAGACCAACGCTTAATGTTACTGGTATGGTT
GAGATTCCTGAAGGAAATGGTTCGGGGATTATTTGGGACAAAGAAGGCCACATTGTTACT
AATTATCATGTGATTGGTAACTCCCTTTCTAGAAACCCAAGCCGTGGGCAAGTAGTTGCA
CGCGTTAATATTCTCGCTGCAGATGGGGTGCAAAAGAATTTTGAGGGTATATTAATTGGT
GCAGACCGTGCCAAGGATCTTGCTGTGTTGAAGGTGGAAGCTTCTGAAGACCTGTTGAGG
CCAATAAGGGTTGGTGAATCTTCTTCTTTGAGAGTTGGCCAGCAATGTTTAGCCATTGGA
AATCCTTTTGGGTTTGATCATACACTCACTGTTGGGGTTATCAGTGGACTGAATCGAGAT
ATATATAGTCAAACTGGAGTGACCATTGGTGGAGGAATTCAAACAGATGCAGCCATCAAC
CCTGGCAACAGCGGAGGTCCTTTGTTAGATTCAAAAGGAAACTTGATTGGGATCAACACT
GCAATATTTACTCAGACAGGGACATCAGCAGGTGTTGGATTTGCAATCCCTTCTTCAACT
GTGTTGAGAGTTGTGCCCCAGTTGATCCAAGCTGGAAAAGTTCTTCGTGCTGGTTTGAAT
ATTGAAATCGCTCCAGACCTGATTGCCAACCAACTTAATGTTCGAAATGGAGCACTGGTT
TTGCTGGTACCTGGAAATAGTCCTGCAGCGAAAGTGGGACTTCTTCCTACTACCAGGGGT
TTTGCAGGAAATATAGTGCTTGGCGATATTATTGAAGCAGTGGATGACAAACCTGTTAGG
AGTAAAGCAGAGTTGTATAAAGCCCTGGATAACTATAACATAGGTGATGAAGTTCGGTTA
AAAATCCGTAGGGGCAACGATAACTTGGAGTTGAGCATAGCATTAGAGGAAAAAGATTCA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400012274
PEP Infomation

pacid=37427720 transcript=PGSC0003DMT400017849 locus=PGSC0003DMG400006931 ID=PGSC0003DMT400017849.v4.03 annot-version=v4.03
Sequence

MEVIIVSSNAKAPFHPHTNQPAILNNSVFLGRRELCFDSISSVCSADPINSNPSTSPSTP
RIGGDNGNSLIEQRFPFATRRMLLTSFFMYSLYHPSRYLSALALGDPSVTVEQVTPSTFP
SAELFPSEERVVELFEKNTYCVVNIFDVTLRPTLNVTGMVEIPEGNGSGIIWDKEGHIVT
NYHVIGNSLSRNPSRGQVVARVNILAADGVQKNFEGILIGADRAKDLAVLKVEASEDLLR
PIRVGESSSLRVGQQCLAIGNPFGFDHTLTVGVISGLNRDIYSQTGVTIGGGIQTDAAIN
PGNSGGPLLDSKGNLIGINTAIFTQTGTSAGVGFAIPSSTVLRVVPQLIQAGKVLRAGLN
IEIAPDLIANQLNVRNGALVLLVPGNSPAAKVGLLPTTRGFAGNIVLGDIIEAVDDKPVR
SKAELYKALDNYNIGDEVRLKIRRGNDNLELSIALEEKDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400017849
Transcript Infomation

pacid=37427720 locus=PGSC0003DMG400006931 ID=PGSC0003DMT400017849.v4.03 annot-version=v4.03
Sequence

ATGGAAGTGATAATAGTATCATCTAACGCAAAAGCACCTTTTCACCCGCATACAAATCAA
CCAGCCATTCTCAATAACTCTGTCTTTTTGGGCCGTCGAGAGCTCTGCTTCGATAGCATT
TCCTCTGTCTGCTCTGCTGATCCCATTAATTCTAATCCATCTACCTCTCCTTCCACTCCC
AGGATTGGTGGAGATAATGGCAATTCTTTGATTGAGCAACGCTTCCCTTTTGCCACACGG
AGGATGTTGTTAACAAGCTTTTTCATGTATTCACTTTATCATCCTTCAAGGTACTTGTCA
GCACTTGCTTTGGGGGATCCGTCTGTCACAGTTGAACAAGTTACACCTTCTACTTTTCCT
TCTGCAGAACTTTTCCCTTCCGAGGAAAGAGTTGTTGAGCTCTTTGAGAAGAACACTTAC
TGTGTTGTCAACATATTTGATGTAACCTTGAGACCAACGCTTAATGTTACTGGTATGGTT
GAGATTCCTGAAGGAAATGGTTCGGGGATTATTTGGGACAAAGAAGGCCACATTGTTACT
AATTATCATGTGATTGGTAACTCCCTTTCTAGAAACCCAAGCCGTGGGCAAGTAGTTGCA
CGCGTTAATATTCTCGCTGCAGATGGGGTGCAAAAGAATTTTGAGGGTATATTAATTGGT
GCAGACCGTGCCAAGGATCTTGCTGTGTTGAAGGTGGAAGCTTCTGAAGACCTGTTGAGG
CCAATAAGGGTTGGTGAATCTTCTTCTTTGAGAGTTGGCCAGCAATGTTTAGCCATTGGA
AATCCTTTTGGGTTTGATCATACACTCACTGTTGGGGTTATCAGTGGACTGAATCGAGAT
ATATATAGTCAAACTGGAGTGACCATTGGTGGAGGAATTCAAACAGATGCAGCCATCAAC
CCTGGCAACAGCGGAGGTCCTTTGTTAGATTCAAAAGGAAACTTGATTGGGATCAACACT
GCAATATTTACTCAGACAGGGACATCAGCAGGTGTTGGATTTGCAATCCCTTCTTCAACT
GTGTTGAGAGTTGTGCCCCAGTTGATCCAAGCTGGAAAAGTTCTTCGTGCTGGTTTGAAT
ATTGAAATCGCTCCAGACCTGATTGCCAACCAACTTAATGTTCGAAATGGAGCACTGGTT
TTGCTGGTACCTGGAAATAGTCCTGCAGCGAAAGTGGGACTTCTTCCTACTACCAGGGGT
TTTGCAGGAAATATAGTGCTTGGCGATATTATTGAAGCAGTGGATGACAAACCTGTTAGG
AGTAAAGCAGAGTTGTATAAAGCCCTGGATAACTATAACATAGGTGATGAAGTTCGGTTA
AAAATCCGTAGGGGCAACGATAACTTGGAGTTGAGCATAGCATTAGAGGAAAAAGATTCA
TGA